RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 CFHR4Q92496 578 aa13.98□□□□□ -0.17
MRPL28-208ENST00000469744 RBMXL1Q96E39 390 aaKnown RBP13.98□□□□□ -0.17
MRPL28-208ENST00000469744 CLCC1Q96S66 551 aa13.98□□□□□ -0.17
MRPL28-208ENST00000469744 RBMXL2O75526 392 aaKnown RBP13.97□□□□□ -0.17
MRPL28-208ENST00000469744 HRASP01112 189 aa13.97□□□□□ -0.17
MRPL28-208ENST00000469744 SFTA3P0C7M3 94 aa13.97□□□□□ -0.17
MRPL28-208ENST00000469744 PRRX1P54821 245 aa13.97□□□□□ -0.17
MRPL28-208ENST00000469744 ZNF833PQ6ZTB9 187 aa13.97□□□□□ -0.17
MRPL28-208ENST00000469744 ZNF383Q8NA42 475 aa13.97□□□□□ -0.17
MRPL28-208ENST00000469744 OR10P1Q8NGE3 313 aa13.97□□□□□ -0.17
MRPL28-208ENST00000469744 OR9G1Q8NH87 305 aa13.97□□□□□ -0.17
MRPL28-208ENST00000469744 QTRT1Q9BXR0 403 aaKnown RBP13.97□□□□□ -0.17
MRPL28-208ENST00000469744 KIAA1456Q9P272 454 aa13.97□□□□□ -0.17
MRPL28-208ENST00000469744 A0A1W2PPE3 182 aa13.96□□□□□ -0.17
MRPL28-208ENST00000469744 LY6LH3BQJ8 138 aa13.96□□□□□ -0.17
MRPL28-208ENST00000469744 DNASE2O00115 360 aaPredicted RBP13.96□□□□□ -0.17
MRPL28-208ENST00000469744 CD28P10747 220 aa13.96□□□□□ -0.17
MRPL28-208ENST00000469744 BRS3P32247 399 aa13.96□□□□□ -0.17
MRPL28-208ENST00000469744 CEACAM3P40198 252 aa13.96□□□□□ -0.17
MRPL28-208ENST00000469744 GUCA2BQ16661 112 aa13.96□□□□□ -0.17
MRPL28-208ENST00000469744 MBD3L1Q8WWY6 194 aa13.96□□□□□ -0.17
MRPL28-208ENST00000469744 TMEM140Q9NV12 185 aa13.96□□□□□ -0.17
MRPL28-208ENST00000469744 TMA7Q9Y2S6 64 aaKnown RBP13.96□□□□□ -0.17
MRPL28-208ENST00000469744 TGP01266 2768 aa13.95□□□□□ -0.18
MRPL28-208ENST00000469744 SH2D7A6NKC9 451 aaPredicted RBP13.95□□□□□ -0.18
MRPL28-208ENST00000469744 C9JQL5 133 aa13.95□□□□□ -0.18
MRPL28-208ENST00000469744 J3QR06 171 aa13.95□□□□□ -0.18
MRPL28-208ENST00000469744 SOX15O60248 233 aa13.95□□□□□ -0.18
MRPL28-208ENST00000469744 IL6RP08887 468 aaPredicted RBP13.95□□□□□ -0.18
MRPL28-208ENST00000469744 DIAPH2-AS1Q14236 149 aa13.95□□□□□ -0.18
MRPL28-208ENST00000469744 RTL8BQ17RB0 113 aa13.95□□□□□ -0.18
MRPL28-208ENST00000469744 RPEQ96AT9 228 aa13.95□□□□□ -0.18
MRPL28-208ENST00000469744 SLC25A33Q9BSK2 321 aa13.95□□□□□ -0.18
MRPL28-208ENST00000469744 GGACTQ9BVM4 153 aa13.95□□□□□ -0.18
MRPL28-208ENST00000469744 FOXA2Q9Y261 457 aaPredicted RBP13.95□□□□□ -0.18
MRPL28-208ENST00000469744 FBXO7Q9Y3I1 522 aa13.95□□□□□ -0.18
MRPL28-208ENST00000469744 RFNGQ9Y644 331 aa13.95□□□□□ -0.18
MRPL28-208ENST00000469744 IFNA17P01571 189 aa13.94□□□□□ -0.18
MRPL28-208ENST00000469744 VDAC2P45880 294 aaPredicted RBP13.94□□□□□ -0.18
MRPL28-208ENST00000469744 NSUN5P1Q3KNT7 163 aa13.94□□□□□ -0.18
MRPL28-208ENST00000469744 C1QL4Q86Z23 238 aa13.94□□□□□ -0.18
MRPL28-208ENST00000469744 EIF5A2Q9GZV4 153 aaKnown RBP13.94□□□□□ -0.18
MRPL28-208ENST00000469744 RBFOX3A6NFN3 312 aa13.93□□□□□ -0.18
MRPL28-208ENST00000469744 C15orf61A6NNL5 157 aa13.93□□□□□ -0.18
MRPL28-208ENST00000469744 C15orf62A8K5M9 175 aa13.93□□□□□ -0.18
MRPL28-208ENST00000469744 MBP02144 154 aa13.93□□□□□ -0.18
MRPL28-208ENST00000469744 CT45A6P0DMU7 189 aa13.93□□□□□ -0.18
MRPL28-208ENST00000469744 CT45A5P0DMU8 189 aa13.93□□□□□ -0.18
MRPL28-208ENST00000469744 CT45A7P0DMV0 189 aa13.93□□□□□ -0.18
MRPL28-208ENST00000469744 PMS2P11Q13670 270 aa13.93□□□□□ -0.18
MRPL28-208ENST00000469744 TMEM41BQ5BJD5 291 aa13.93□□□□□ -0.18
MRPL28-208ENST00000469744 OR8G2PQ6IF36 304 aa13.93□□□□□ -0.18
MRPL28-208ENST00000469744 RSG1Q9BU20 258 aa13.93□□□□□ -0.18
MRPL28-208ENST00000469744 SLC35B3Q9H1N7 401 aa13.93□□□□□ -0.18
MRPL28-208ENST00000469744 TMEM14BQ9NUH8 114 aa13.93□□□□□ -0.18
MRPL28-208ENST00000469744 AMMECR1Q9Y4X0 333 aaPredicted RBP13.93□□□□□ -0.18
MRPL28-208ENST00000469744 HSPE1P61604 102 aaKnown RBP13.93□□□□□ -0.18
MRPL28-208ENST00000469744 CCDC144NLQ6NUI1 221 aa13.93□□□□□ -0.18
MRPL28-208ENST00000469744 WIPF2Q8TF74 440 aaPredicted RBP13.93□□□□□ -0.18
MRPL28-208ENST00000469744 RHOVQ96L33 236 aa13.93□□□□□ -0.18
MRPL28-208ENST00000469744 RBM14Q96PK6 669 aaKnown RBP13.93□□□□□ -0.18
MRPL28-208ENST00000469744 WNT10AQ9GZT5 417 aa13.93□□□□□ -0.18
MRPL28-208ENST00000469744 RPRMQ9NS64 109 aa13.93□□□□□ -0.18
MRPL28-208ENST00000469744 SLC35D1Q9NTN3 355 aa13.93□□□□□ -0.18
MRPL28-208ENST00000469744 PRNDQ9UKY0 176 aa13.93□□□□□ -0.18
MRPL28-208ENST00000469744 ZNF257Q9Y2Q1 563 aa13.93□□□□□ -0.18
MRPL28-208ENST00000469744 UBE2L5PA0A1B0GUS4 154 aa13.92□□□□□ -0.18
MRPL28-208ENST00000469744 A0A1W2PPI3 338 aa13.92□□□□□ -0.18
MRPL28-208ENST00000469744 AMY1AP04745 511 aa13.92□□□□□ -0.18
MRPL28-208ENST00000469744 ZNF137PP52743 207 aa13.92□□□□□ -0.18
MRPL28-208ENST00000469744 ATP5IP56385 69 aaPredicted RBP13.92□□□□□ -0.18
MRPL28-208ENST00000469744 OR2B8PP59922 312 aa13.92□□□□□ -0.18
MRPL28-208ENST00000469744 ZNF506Q5JVG8 444 aa13.92□□□□□ -0.18
MRPL28-208ENST00000469744 OR4A47Q6IF82 309 aa13.92□□□□□ -0.18
MRPL28-208ENST00000469744 SSX9Q7RTT3 188 aa13.92□□□□□ -0.18
MRPL28-208ENST00000469744 C16orf82Q7Z2V1 217 aa13.92□□□□□ -0.18
MRPL28-208ENST00000469744 CLRN3Q8NCR9 226 aa13.92□□□□□ -0.18
MRPL28-208ENST00000469744 OR10X1Q8NGY0 326 aa13.92□□□□□ -0.18
MRPL28-208ENST00000469744 OSR1Q8TAX0 266 aaPredicted RBP13.92□□□□□ -0.18
MRPL28-208ENST00000469744 CITED2Q99967 270 aaPredicted RBP13.92□□□□□ -0.18
MRPL28-208ENST00000469744 PLXNB1O43157 2135 aa13.91□□□□□ -0.18
MRPL28-208ENST00000469744 OOSP1A8MZH6 123 aa13.91□□□□□ -0.18
MRPL28-208ENST00000469744 UPK2O00526 184 aa13.91□□□□□ -0.18
MRPL28-208ENST00000469744 MPDU1O75352 247 aa13.91□□□□□ -0.18
MRPL28-208ENST00000469744 APOA2P02652 100 aa13.91□□□□□ -0.18
MRPL28-208ENST00000469744 SNRNP70P08621 437 aaKnown RBP13.91□□□□□ -0.18
MRPL28-208ENST00000469744 REG1BP48304 166 aa13.91□□□□□ -0.18
MRPL28-208ENST00000469744 PPT1P50897 306 aa13.91□□□□□ -0.18
MRPL28-208ENST00000469744 KHDC3LQ587J8 217 aa13.91□□□□□ -0.18
MRPL28-208ENST00000469744 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.91□□□□□ -0.18
MRPL28-208ENST00000469744 SFT2D1Q8WV19 159 aa13.91□□□□□ -0.18
MRPL28-208ENST00000469744 FKBP11Q9NYL4 201 aa13.91□□□□□ -0.18
MRPL28-208ENST00000469744 BET1LQ9NYM9 111 aa13.91□□□□□ -0.18
MRPL28-208ENST00000469744 NOTCH3Q9UM47 2321 aa13.91□□□□□ -0.18
MRPL28-208ENST00000469744 C17orf112F2Z3M2 114 aa13.9□□□□□ -0.18
MRPL28-208ENST00000469744 NDUFS6O75380 124 aaKnown RBP13.9□□□□□ -0.18
MRPL28-208ENST00000469744 HSPB1P04792 205 aaKnown RBP13.9□□□□□ -0.18
MRPL28-208ENST00000469744 FGF7P21781 194 aa13.9□□□□□ -0.18
MRPL28-208ENST00000469744 RAB11AP62491 216 aa13.9□□□□□ -0.18
MRPL28-208ENST00000469744 CCL20P78556 96 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms