RNA–Protein interactions for RNA: ENST00000469506.3

TRAK1-207, Transcript of trafficking kinesin protein 1, humanhuman

TSL 2

Gene TRAK1, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-207ENST00000469506 TOMM20LQ6UXN7 152 aa13.75□□□□□ -0.21
TRAK1-207ENST00000469506 TCF24Q7RTU0 167 aa13.75□□□□□ -0.21
TRAK1-207ENST00000469506 TMEM217Q8N7C4 229 aa13.75□□□□□ -0.21
TRAK1-207ENST00000469506 ZNF114Q8NC26 417 aa13.75□□□□□ -0.21
TRAK1-207ENST00000469506 OR11H2Q8NH07 326 aa13.75□□□□□ -0.21
TRAK1-207ENST00000469506 GPX8Q8TED1 209 aa13.75□□□□□ -0.21
TRAK1-207ENST00000469506 GATAD1Q8WUU5 269 aa13.75□□□□□ -0.21
TRAK1-207ENST00000469506 KIAA1109Q2LD37 5005 aa13.75□□□□□ -0.21
TRAK1-207ENST00000469506 IGHV3-66A0A0C4DH42 116 aa13.74□□□□□ -0.21
TRAK1-207ENST00000469506 PRSS3P35030 304 aa13.74□□□□□ -0.21
TRAK1-207ENST00000469506 PRCDQ00LT1 54 aa13.74□□□□□ -0.21
TRAK1-207ENST00000469506 MRGPRFQ96AM1 343 aa13.74□□□□□ -0.21
TRAK1-207ENST00000469506 PINX1Q96BK5 328 aaKnown RBP13.74□□□□□ -0.21
TRAK1-207ENST00000469506 YIPF6Q96EC8 236 aa13.74□□□□□ -0.21
TRAK1-207ENST00000469506 TXN2Q99757 166 aa13.74□□□□□ -0.21
TRAK1-207ENST00000469506 Q9H521 79 aa13.74□□□□□ -0.21
TRAK1-207ENST00000469506 VSIRQ9H7M9 311 aa13.74□□□□□ -0.21
TRAK1-207ENST00000469506 FBXL17Q9UF56 701 aa13.74□□□□□ -0.21
TRAK1-207ENST00000469506 DNAH6Q9C0G6 4158 aa13.73□□□□□ -0.21
TRAK1-207ENST00000469506 HSPE1P61604 102 aaKnown RBP13.73□□□□□ -0.21
TRAK1-207ENST00000469506 LEMD1Q68G75 181 aa13.73□□□□□ -0.21
TRAK1-207ENST00000469506 C11orf45Q8TAV5 145 aa13.73□□□□□ -0.21
TRAK1-207ENST00000469506 TSC22D3Q99576 134 aa13.73□□□□□ -0.21
TRAK1-207ENST00000469506 C11orf68Q9H3H3 251 aaKnown RBP13.73□□□□□ -0.21
TRAK1-207ENST00000469506 ZFAND3Q9H8U3 227 aa13.73□□□□□ -0.21
TRAK1-207ENST00000469506 FAM212BQ9NTI7 297 aaPredicted RBP13.73□□□□□ -0.21
TRAK1-207ENST00000469506 A0A1B0GU03 582 aa13.72□□□□□ -0.21
TRAK1-207ENST00000469506 DFFBO76075 338 aa13.72□□□□□ -0.21
TRAK1-207ENST00000469506 GIG44P09565 113 aaPredicted RBP13.72□□□□□ -0.21
TRAK1-207ENST00000469506 KCTD21Q4G0X4 260 aa13.72□□□□□ -0.21
TRAK1-207ENST00000469506 H2BFWTQ7Z2G1 175 aa13.72□□□□□ -0.21
TRAK1-207ENST00000469506 CROCCP3Q8IVE0 287 aa13.72□□□□□ -0.21
TRAK1-207ENST00000469506 OR4A16Q8NH70 328 aa13.72□□□□□ -0.21
TRAK1-207ENST00000469506 C6orf62Q9GZU0 229 aaPredicted RBP13.72□□□□□ -0.21
TRAK1-207ENST00000469506 MS4A6AQ9H2W1 248 aa13.72□□□□□ -0.21
TRAK1-207ENST00000469506 MRPL36Q9P0J6 103 aaKnown RBP13.72□□□□□ -0.21
TRAK1-207ENST00000469506 GNG7O60262 68 aa13.71□□□□□ -0.21
TRAK1-207ENST00000469506 IGKV1-5P01602 117 aa13.71□□□□□ -0.21
TRAK1-207ENST00000469506 P0C879 139 aa13.71□□□□□ -0.21
TRAK1-207ENST00000469506 CMC4P56277 68 aaPredicted RBP13.71□□□□□ -0.21
TRAK1-207ENST00000469506 DEFB131AP59861 70 aa13.71□□□□□ -0.21
TRAK1-207ENST00000469506 MLANAQ16655 118 aa13.71□□□□□ -0.21
TRAK1-207ENST00000469506 HECTD4Q9Y4D8 3996 aa13.7□□□□□ -0.22
TRAK1-207ENST00000469506 CA1P00915 261 aaPredicted RBP13.7□□□□□ -0.22
TRAK1-207ENST00000469506 TSPAN5P62079 268 aa13.7□□□□□ -0.22
TRAK1-207ENST00000469506 RBMS2Q15434 407 aaKnown RBP13.7□□□□□ -0.22
TRAK1-207ENST00000469506 PVRIGQ6DKI7 326 aa13.7□□□□□ -0.22
TRAK1-207ENST00000469506 PUS1Q9Y606 427 aaKnown RBP eCLIP13.7□□□□□ -0.22
TRAK1-207ENST00000469506 PCLOQ9Y6V0 5065 aa13.69□□□□□ -0.22
TRAK1-207ENST00000469506 A0A0B4J293 547 aa13.69□□□□□ -0.22
TRAK1-207ENST00000469506 M0QYG6 137 aa13.69□□□□□ -0.22
TRAK1-207ENST00000469506 ST8SIA3O43173 380 aa13.69□□□□□ -0.22
TRAK1-207ENST00000469506 TMEM50AO95807 157 aa13.69□□□□□ -0.22
TRAK1-207ENST00000469506 PI3P19957 117 aa13.69□□□□□ -0.22
TRAK1-207ENST00000469506 UCP3P55916 312 aa13.69□□□□□ -0.22
TRAK1-207ENST00000469506 LPCAT3Q6P1A2 487 aa13.69□□□□□ -0.22
TRAK1-207ENST00000469506 SNX29P2Q8IUI4 249 aa13.69□□□□□ -0.22
TRAK1-207ENST00000469506 Q8NAQ8 132 aa13.69□□□□□ -0.22
TRAK1-207ENST00000469506 CMTM3Q96MX0 182 aa13.69□□□□□ -0.22
TRAK1-207ENST00000469506 COMMD3Q9UBI1 195 aa13.69□□□□□ -0.22
TRAK1-207ENST00000469506 APLNQ9ULZ1 77 aa13.69□□□□□ -0.22
TRAK1-207ENST00000469506 RBMY1A1P0DJD3 496 aaKnown RBP13.68□□□□□ -0.22
TRAK1-207ENST00000469506 RBMY1CP0DJD4 496 aa13.68□□□□□ -0.22
TRAK1-207ENST00000469506 RBMY1FQ15415 496 aaKnown RBP13.68□□□□□ -0.22
TRAK1-207ENST00000469506 TP53RKQ96S44 253 aa13.68□□□□□ -0.22
TRAK1-207ENST00000469506 FNDC4Q9H6D8 234 aaPredicted RBP13.68□□□□□ -0.22
TRAK1-207ENST00000469506 A0A0G2JRQ6 117 aa13.67□□□□□ -0.22
TRAK1-207ENST00000469506 RNASE2P10153 161 aaKnown RBP13.67□□□□□ -0.22
TRAK1-207ENST00000469506 ELK1P19419 428 aa13.67□□□□□ -0.22
TRAK1-207ENST00000469506 PPP5CP53041 499 aa13.67□□□□□ -0.22
TRAK1-207ENST00000469506 ERHP84090 104 aaKnown RBP13.67□□□□□ -0.22
TRAK1-207ENST00000469506 TMEM187Q14656 261 aa13.67□□□□□ -0.22
TRAK1-207ENST00000469506 ZNF600Q6ZNG1 722 aa13.67□□□□□ -0.22
TRAK1-207ENST00000469506 MFFQ9GZY8 342 aa13.67□□□□□ -0.22
TRAK1-207ENST00000469506 DNASE2O00115 360 aaPredicted RBP13.66□□□□□ -0.22
TRAK1-207ENST00000469506 RCVRNP35243 200 aa13.66□□□□□ -0.22
TRAK1-207ENST00000469506 PAFAH1B2P68402 229 aa13.66□□□□□ -0.22
TRAK1-207ENST00000469506 DUSP18Q8NEJ0 188 aa13.66□□□□□ -0.22
TRAK1-207ENST00000469506 C2CD4CQ8TF44 421 aa13.66□□□□□ -0.22
TRAK1-207ENST00000469506 GINS3Q9BRX5 216 aa13.66□□□□□ -0.22
TRAK1-207ENST00000469506 SCPEP1Q9HB40 452 aa13.66□□□□□ -0.22
TRAK1-207ENST00000469506 TRAV2A0A0B4J234 112 aa13.65□□□□□ -0.22
TRAK1-207ENST00000469506 KNCNA6PVL3 124 aa13.65□□□□□ -0.22
TRAK1-207ENST00000469506 INS-IGF2F8WCM5 200 aa13.65□□□□□ -0.22
TRAK1-207ENST00000469506 K7EQG2 157 aa13.65□□□□□ -0.22
TRAK1-207ENST00000469506 HPGDSO60760 199 aa13.65□□□□□ -0.22
TRAK1-207ENST00000469506 APOA1P02647 267 aa13.65□□□□□ -0.22
TRAK1-207ENST00000469506 IFNA4P05014 189 aa13.65□□□□□ -0.22
TRAK1-207ENST00000469506 C4BPBP20851 252 aa13.65□□□□□ -0.22
TRAK1-207ENST00000469506 ETV6P41212 452 aa13.65□□□□□ -0.22
TRAK1-207ENST00000469506 NPBWR1P48145 328 aa13.65□□□□□ -0.22
TRAK1-207ENST00000469506 RND3P61587 244 aa13.65□□□□□ -0.22
TRAK1-207ENST00000469506 NCS1P62166 190 aa13.65□□□□□ -0.22
TRAK1-207ENST00000469506 RPL11P62913 178 aaKnown RBP13.65□□□□□ -0.22
TRAK1-207ENST00000469506 RNASE12Q5GAN4 147 aaKnown RBP13.65□□□□□ -0.22
TRAK1-207ENST00000469506 TRPT1Q86TN4 253 aaKnown RBP13.65□□□□□ -0.22
TRAK1-207ENST00000469506 LHFPL1Q86WI0 220 aa13.65□□□□□ -0.22
TRAK1-207ENST00000469506 RABAC1Q9UI14 185 aa13.65□□□□□ -0.22
TRAK1-207ENST00000469506 IGHV4-28A0A0C4DH34 117 aa13.64□□□□□ -0.23
TRAK1-207ENST00000469506 S100GP29377 79 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms