RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 SEC22AQ96IW7 307 aa8.95□□□□□ -0.98
HDAC3-204ENST00000469207 ATP6V0BQ99437 205 aa8.95□□□□□ -0.98
HDAC3-204ENST00000469207 C6orf62Q9GZU0 229 aaPredicted RBP8.95□□□□□ -0.98
HDAC3-204ENST00000469207 MS4A6AQ9H2W1 248 aa8.95□□□□□ -0.98
HDAC3-204ENST00000469207 PRNDQ9UKY0 176 aa8.95□□□□□ -0.98
HDAC3-204ENST00000469207 ANAPC10Q9UM13 185 aa8.95□□□□□ -0.98
HDAC3-204ENST00000469207 FAT2Q9NYQ8 4349 aa8.95□□□□□ -0.98
HDAC3-204ENST00000469207 IGLL5B9A064 214 aa8.94□□□□□ -0.98
HDAC3-204ENST00000469207 NAT1P18440 290 aa8.94□□□□□ -0.98
HDAC3-204ENST00000469207 HRH1P35367 487 aa8.94□□□□□ -0.98
HDAC3-204ENST00000469207 LSM3P62310 102 aaKnown RBP8.94□□□□□ -0.98
HDAC3-204ENST00000469207 MLANAQ16655 118 aa8.94□□□□□ -0.98
HDAC3-204ENST00000469207 TBC1D26Q86UD7 250 aa8.94□□□□□ -0.98
HDAC3-204ENST00000469207 OR4A16Q8NH70 328 aa8.94□□□□□ -0.98
HDAC3-204ENST00000469207 BORCS5Q969J3 196 aa8.94□□□□□ -0.98
HDAC3-204ENST00000469207 FKBP11Q9NYL4 201 aa8.94□□□□□ -0.98
HDAC3-204ENST00000469207 APLNQ9ULZ1 77 aa8.94□□□□□ -0.98
HDAC3-204ENST00000469207 DNAH17Q9UFH2 4485 aa8.94□□□□□ -0.98
HDAC3-204ENST00000469207 AGRNO00468 2067 aa8.93□□□□□ -0.98
HDAC3-204ENST00000469207 A0A1B0GU03 582 aa8.93□□□□□ -0.98
HDAC3-204ENST00000469207 DNASE2O00115 360 aaPredicted RBP8.93□□□□□ -0.98
HDAC3-204ENST00000469207 ST8SIA3O43173 380 aa8.93□□□□□ -0.98
HDAC3-204ENST00000469207 GNG7O60262 68 aa8.93□□□□□ -0.98
HDAC3-204ENST00000469207 GIG44P09565 113 aaPredicted RBP8.93□□□□□ -0.98
HDAC3-204ENST00000469207 RBMY1A1P0DJD3 496 aaKnown RBP8.93□□□□□ -0.98
HDAC3-204ENST00000469207 RBMY1CP0DJD4 496 aa8.93□□□□□ -0.98
HDAC3-204ENST00000469207 CMC4P56277 68 aaPredicted RBP8.93□□□□□ -0.98
HDAC3-204ENST00000469207 RPL11P62913 178 aaKnown RBP8.93□□□□□ -0.98
HDAC3-204ENST00000469207 RBMY1FQ15415 496 aaKnown RBP8.93□□□□□ -0.98
HDAC3-204ENST00000469207 UBE2NLQ5JXB2 153 aa8.93□□□□□ -0.98
HDAC3-204ENST00000469207 TMEM69Q5SWH9 247 aa8.93□□□□□ -0.98
HDAC3-204ENST00000469207 H2BFWTQ7Z2G1 175 aa8.93□□□□□ -0.98
HDAC3-204ENST00000469207 CADM3Q8N126 398 aa8.93□□□□□ -0.98
HDAC3-204ENST00000469207 SAMD12Q8N8I0 201 aa8.93□□□□□ -0.98
HDAC3-204ENST00000469207 C2CD4CQ8TF44 421 aa8.93□□□□□ -0.98
HDAC3-204ENST00000469207 MRGPRFQ96AM1 343 aa8.93□□□□□ -0.98
HDAC3-204ENST00000469207 CMTM3Q96MX0 182 aa8.93□□□□□ -0.98
HDAC3-204ENST00000469207 TXN2Q99757 166 aa8.93□□□□□ -0.98
HDAC3-204ENST00000469207 YTHDF1Q9BYJ9 559 aaKnown RBP8.93□□□□□ -0.98
HDAC3-204ENST00000469207 C11orf68Q9H3H3 251 aaKnown RBP8.93□□□□□ -0.98
HDAC3-204ENST00000469207 VSIRQ9H7M9 311 aa8.93□□□□□ -0.98
HDAC3-204ENST00000469207 MRPL36Q9P0J6 103 aaKnown RBP8.93□□□□□ -0.98
HDAC3-204ENST00000469207 PUS1Q9Y606 427 aaKnown RBP eCLIP8.93□□□□□ -0.98
HDAC3-204ENST00000469207 ATP6V1G2O95670 118 aa8.92□□□□□ -0.98
HDAC3-204ENST00000469207 EIF4EP06730 217 aaKnown RBP8.92□□□□□ -0.98
HDAC3-204ENST00000469207 PRSS3P35030 304 aa8.92□□□□□ -0.98
HDAC3-204ENST00000469207 HSPE1P61604 102 aaKnown RBP8.92□□□□□ -0.98
HDAC3-204ENST00000469207 TSPAN5P62079 268 aa8.92□□□□□ -0.98
HDAC3-204ENST00000469207 PAFAH1B2P68402 229 aa8.92□□□□□ -0.98
HDAC3-204ENST00000469207 PRCDQ00LT1 54 aa8.92□□□□□ -0.98
HDAC3-204ENST00000469207 TMEM187Q14656 261 aa8.92□□□□□ -0.98
HDAC3-204ENST00000469207 TSC22D3Q99576 134 aa8.92□□□□□ -0.98
HDAC3-204ENST00000469207 MFFQ9GZY8 342 aa8.92□□□□□ -0.98
HDAC3-204ENST00000469207 ZFAND3Q9H8U3 227 aa8.92□□□□□ -0.98
HDAC3-204ENST00000469207 KNCNA6PVL3 124 aa8.91□□□□□ -0.98
HDAC3-204ENST00000469207 TMEM50AO95807 157 aa8.91□□□□□ -0.98
HDAC3-204ENST00000469207 PI3P19957 117 aa8.91□□□□□ -0.98
HDAC3-204ENST00000469207 PPP5CP53041 499 aa8.91□□□□□ -0.98
HDAC3-204ENST00000469207 TAS2R46P59540 309 aa8.91□□□□□ -0.98
HDAC3-204ENST00000469207 ERHP84090 104 aaKnown RBP8.91□□□□□ -0.98
HDAC3-204ENST00000469207 Q8NAQ8 132 aa8.91□□□□□ -0.98
HDAC3-204ENST00000469207 ZNF114Q8NC26 417 aa8.91□□□□□ -0.98
HDAC3-204ENST00000469207 GPX8Q8TED1 209 aa8.91□□□□□ -0.98
HDAC3-204ENST00000469207 RABAC1Q9UI14 185 aa8.91□□□□□ -0.98
HDAC3-204ENST00000469207 ELOA3CA0A087WX78 387 aaPredicted RBP8.9□□□□□ -0.98
HDAC3-204ENST00000469207 A0A0B4J293 547 aa8.9□□□□□ -0.98
HDAC3-204ENST00000469207 IGHV4-28A0A0C4DH34 117 aa8.9□□□□□ -0.98
HDAC3-204ENST00000469207 ETV6P41212 452 aa8.9□□□□□ -0.98
HDAC3-204ENST00000469207 STHQ8IWL8 128 aa8.9□□□□□ -0.98
HDAC3-204ENST00000469207 DUSP18Q8NEJ0 188 aa8.9□□□□□ -0.98
HDAC3-204ENST00000469207 CLEC5AQ9NY25 188 aa8.9□□□□□ -0.98
HDAC3-204ENST00000469207 COMMD3Q9UBI1 195 aa8.9□□□□□ -0.98
HDAC3-204ENST00000469207 DYNC1H1Q14204 4646 aaKnown RBP8.9□□□□□ -0.99
HDAC3-204ENST00000469207 M0QYG6 137 aa8.89□□□□□ -0.99
HDAC3-204ENST00000469207 IGKV1-5P01602 117 aa8.89□□□□□ -0.99
HDAC3-204ENST00000469207 C4BPBP20851 252 aa8.89□□□□□ -0.99
HDAC3-204ENST00000469207 HLA-DMBP28068 263 aa8.89□□□□□ -0.99
HDAC3-204ENST00000469207 NPBWR1P48145 328 aa8.89□□□□□ -0.99
HDAC3-204ENST00000469207 RNASE12Q5GAN4 147 aaKnown RBP8.89□□□□□ -0.99
HDAC3-204ENST00000469207 ZNF600Q6ZNG1 722 aa8.89□□□□□ -0.99
HDAC3-204ENST00000469207 Q6ZTC4 211 aa8.89□□□□□ -0.99
HDAC3-204ENST00000469207 ZNF767PQ75MW2 155 aa8.89□□□□□ -0.99
HDAC3-204ENST00000469207 SNX29P2Q8IUI4 249 aa8.89□□□□□ -0.99
HDAC3-204ENST00000469207 STXBP6Q8NFX7 210 aa8.89□□□□□ -0.99
HDAC3-204ENST00000469207 GINS3Q9BRX5 216 aa8.89□□□□□ -0.99
HDAC3-204ENST00000469207 SCRT1Q9BWW7 348 aa8.89□□□□□ -0.99
HDAC3-204ENST00000469207 FNDC4Q9H6D8 234 aaPredicted RBP8.89□□□□□ -0.99
HDAC3-204ENST00000469207 X6R8D5 127 aa8.89□□□□□ -0.99
HDAC3-204ENST00000469207 RYR1P21817 5038 aa8.88□□□□□ -0.99
HDAC3-204ENST00000469207 K7EQG2 157 aa8.88□□□□□ -0.99
HDAC3-204ENST00000469207 ZNF688P0C7X2 276 aa8.88□□□□□ -0.99
HDAC3-204ENST00000469207 RNASE2P10153 161 aaKnown RBP8.88□□□□□ -0.99
HDAC3-204ENST00000469207 NPPCP23582 126 aa8.88□□□□□ -0.99
HDAC3-204ENST00000469207 SNCAP37840 140 aa8.88□□□□□ -0.99
HDAC3-204ENST00000469207 SP6Q3SY56 376 aa8.88□□□□□ -0.99
HDAC3-204ENST00000469207 LPCAT3Q6P1A2 487 aa8.88□□□□□ -0.99
HDAC3-204ENST00000469207 TRPT1Q86TN4 253 aaKnown RBP8.88□□□□□ -0.99
HDAC3-204ENST00000469207 CROCCP3Q8IVE0 287 aa8.88□□□□□ -0.99
HDAC3-204ENST00000469207 YIPF6Q96EC8 236 aa8.88□□□□□ -0.99
HDAC3-204ENST00000469207 TP53RKQ96S44 253 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms