RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 TBPP20226 339 aa16.2■□□□□ 0.18
TTC28-204ENST00000468807 SNCAP37840 140 aa16.2■□□□□ 0.18
TTC28-204ENST00000468807 RNASE11Q8TAA1 199 aaKnown RBP16.2■□□□□ 0.18
TTC28-204ENST00000468807 SMPXQ9UHP9 88 aa16.2■□□□□ 0.18
TTC28-204ENST00000468807 EPPK1P58107 5090 aaKnown RBP16.2■□□□□ 0.18
TTC28-204ENST00000468807 IGKV3-7A0A075B6H7 116 aa16.19■□□□□ 0.18
TTC28-204ENST00000468807 IGHV7-4-1A0A0J9YVY3 117 aa16.19■□□□□ 0.18
TTC28-204ENST00000468807 JTBO76095 146 aa16.19■□□□□ 0.18
TTC28-204ENST00000468807 ATG12O94817 140 aa16.19■□□□□ 0.18
TTC28-204ENST00000468807 TFPI2P48307 235 aa16.19■□□□□ 0.18
TTC28-204ENST00000468807 TAS2R19P59542 299 aa16.19■□□□□ 0.18
TTC28-204ENST00000468807 ODF3L2Q3SX64 289 aa16.19■□□□□ 0.18
TTC28-204ENST00000468807 SP6Q3SY56 376 aa16.19■□□□□ 0.18
TTC28-204ENST00000468807 GPR141Q7Z602 305 aa16.19■□□□□ 0.18
TTC28-204ENST00000468807 CCDC71LQ8N9Z2 235 aa16.19■□□□□ 0.18
TTC28-204ENST00000468807 TMEM116Q8NCL8 245 aa16.19■□□□□ 0.18
TTC28-204ENST00000468807 C15orf40Q8WUR7 153 aa16.19■□□□□ 0.18
TTC28-204ENST00000468807 RNF2Q99496 336 aa16.19■□□□□ 0.18
TTC28-204ENST00000468807 TXN2Q99757 166 aa16.19■□□□□ 0.18
TTC28-204ENST00000468807 RHPN1-AS1Q9BWJ2 59 aa16.19■□□□□ 0.18
TTC28-204ENST00000468807 NXF2Q9GZY0 626 aaKnown RBP16.19■□□□□ 0.18
TTC28-204ENST00000468807 ALMS1Q8TCU4 4167 aa16.19■□□□□ 0.18
TTC28-204ENST00000468807 IGHV3OR16-13A0A075B7E8 117 aa16.18■□□□□ 0.18
TTC28-204ENST00000468807 IGHV3-74A0A0B4J1X5 117 aa16.18■□□□□ 0.18
TTC28-204ENST00000468807 RAB3DO95716 219 aa16.18■□□□□ 0.18
TTC28-204ENST00000468807 RPL35AP18077 110 aaKnown RBP16.18■□□□□ 0.18
TTC28-204ENST00000468807 DEFB135Q30KP9 77 aa16.18■□□□□ 0.18
TTC28-204ENST00000468807 TMEM229BQ8NBD8 167 aa16.18■□□□□ 0.18
TTC28-204ENST00000468807 OR13C8Q8NGS7 320 aa16.18■□□□□ 0.18
TTC28-204ENST00000468807 ZFAND1Q8TCF1 268 aa16.18■□□□□ 0.18
TTC28-204ENST00000468807 MRPS26Q9BYN8 205 aaKnown RBP16.18■□□□□ 0.18
TTC28-204ENST00000468807 TRAV14DV4A0A0A6YYC5 116 aa16.17■□□□□ 0.18
TTC28-204ENST00000468807 A0A0B4J293 547 aa16.17■□□□□ 0.18
TTC28-204ENST00000468807 CHEK1O14757 476 aa16.17■□□□□ 0.18
TTC28-204ENST00000468807 ST8SIA3O43173 380 aa16.17■□□□□ 0.18
TTC28-204ENST00000468807 FCGR2BP31994 310 aaPredicted RBP16.17■□□□□ 0.18
TTC28-204ENST00000468807 HOXA1P49639 335 aaPredicted RBP16.17■□□□□ 0.18
TTC28-204ENST00000468807 STEAP1BQ6NZ63 245 aa16.17■□□□□ 0.18
TTC28-204ENST00000468807 DUSP18Q8NEJ0 188 aa16.17■□□□□ 0.18
TTC28-204ENST00000468807 TERB2Q8NHR7 220 aa16.17■□□□□ 0.18
TTC28-204ENST00000468807 MARCH1Q8TCQ1 289 aa16.17■□□□□ 0.18
TTC28-204ENST00000468807 RRNAD1Q96FB5 475 aaKnown RBP16.17■□□□□ 0.18
TTC28-204ENST00000468807 NPBWR1P48145 328 aa16.16■□□□□ 0.18
TTC28-204ENST00000468807 FAAP20Q6NZ36 180 aa16.16■□□□□ 0.18
TTC28-204ENST00000468807 APRG1Q8IVJ8 170 aa16.16■□□□□ 0.18
TTC28-204ENST00000468807 STPG3Q8N7X2 389 aa16.16■□□□□ 0.18
TTC28-204ENST00000468807 ZNF414Q96IQ9 312 aa16.16■□□□□ 0.18
TTC28-204ENST00000468807 OR10C1Q96KK4 312 aa16.16■□□□□ 0.18
TTC28-204ENST00000468807 MIXL1Q9H2W2 232 aa16.16■□□□□ 0.18
TTC28-204ENST00000468807 ENY2Q9NPA8 101 aa16.16■□□□□ 0.18
TTC28-204ENST00000468807 GABARAPH6UMI1 98 aa16.15■□□□□ 0.18
TTC28-204ENST00000468807 SPRY2O43597 315 aa16.15■□□□□ 0.18
TTC28-204ENST00000468807 CD74P04233 296 aa16.15■□□□□ 0.18
TTC28-204ENST00000468807 ETV6P41212 452 aa16.15■□□□□ 0.18
TTC28-204ENST00000468807 GBGT1Q8N5D6 347 aa16.15■□□□□ 0.18
TTC28-204ENST00000468807 GINS3Q9BRX5 216 aa16.15■□□□□ 0.18
TTC28-204ENST00000468807 A0A0J9YWU9 116 aa16.14■□□□□ 0.17
TTC28-204ENST00000468807 CTDSP2O14595 271 aa16.14■□□□□ 0.17
TTC28-204ENST00000468807 P0C879 139 aa16.14■□□□□ 0.17
TTC28-204ENST00000468807 BMI1P35226 326 aa16.14■□□□□ 0.17
TTC28-204ENST00000468807 SUB1P53999 127 aaKnown RBP eCLIP16.14■□□□□ 0.17
TTC28-204ENST00000468807 PMS2P11Q13670 270 aa16.14■□□□□ 0.17
TTC28-204ENST00000468807 SPCS2Q15005 226 aa16.14■□□□□ 0.17
TTC28-204ENST00000468807 TOMM20LQ6UXN7 152 aa16.14■□□□□ 0.17
TTC28-204ENST00000468807 Q6ZWC4 215 aa16.14■□□□□ 0.17
TTC28-204ENST00000468807 C6orf62Q9GZU0 229 aaPredicted RBP16.14■□□□□ 0.17
TTC28-204ENST00000468807 C14orf166Q9Y224 244 aaKnown RBP16.14■□□□□ 0.17
TTC28-204ENST00000468807 CXorf65A6NEN9 183 aa16.13■□□□□ 0.17
TTC28-204ENST00000468807 UBE2CO00762 179 aa16.13■□□□□ 0.17
TTC28-204ENST00000468807 MEF2DQ14814 521 aa16.13■□□□□ 0.17
TTC28-204ENST00000468807 ZNF124Q15973 351 aa16.13■□□□□ 0.17
TTC28-204ENST00000468807 GALNT14Q96FL9 552 aa16.13■□□□□ 0.17
TTC28-204ENST00000468807 TP53TG1Q9Y2A0 90 aa16.13■□□□□ 0.17
TTC28-204ENST00000468807 PUS1Q9Y606 427 aaKnown RBP eCLIP16.13■□□□□ 0.17
TTC28-204ENST00000468807 IGHV3-66A0A0C4DH42 116 aa16.12■□□□□ 0.17
TTC28-204ENST00000468807 KIR2DL5BA0A0G2JN68 375 aa16.12■□□□□ 0.17
TTC28-204ENST00000468807 KIR2DL5BA0A0G2JPC4 375 aa16.12■□□□□ 0.17
TTC28-204ENST00000468807 A0A0G2JRQ6 117 aa16.12■□□□□ 0.17
TTC28-204ENST00000468807 TEX13DA0A0J9YY54 714 aaPredicted RBP16.12■□□□□ 0.17
TTC28-204ENST00000468807 DISC1C4P0D8 188 aa16.12■□□□□ 0.17
TTC28-204ENST00000468807 OR5AC1P0C628 307 aa16.12■□□□□ 0.17
TTC28-204ENST00000468807 UCP1P25874 307 aa16.12■□□□□ 0.17
TTC28-204ENST00000468807 ALDH3B2P48448 385 aa16.12■□□□□ 0.17
TTC28-204ENST00000468807 MRPS10P82664 201 aaKnown RBP16.12■□□□□ 0.17
TTC28-204ENST00000468807 IL18Q14116 193 aa16.12■□□□□ 0.17
TTC28-204ENST00000468807 ZNF600Q6ZNG1 722 aa16.12■□□□□ 0.17
TTC28-204ENST00000468807 TCF24Q7RTU0 167 aa16.12■□□□□ 0.17
TTC28-204ENST00000468807 LYG2Q86SG7 212 aa16.12■□□□□ 0.17
TTC28-204ENST00000468807 WFDC3Q8IUB2 231 aa16.12■□□□□ 0.17
TTC28-204ENST00000468807 CLVS1Q8IUQ0 354 aaPredicted RBP16.12■□□□□ 0.17
TTC28-204ENST00000468807 KIR2DL5AQ8N109 375 aa16.12■□□□□ 0.17
TTC28-204ENST00000468807 KIR2DL5BQ8NHK3 375 aa16.12■□□□□ 0.17
TTC28-204ENST00000468807 CORTO00230 105 aa16.11■□□□□ 0.17
TTC28-204ENST00000468807 RNASE2P10153 161 aaKnown RBP16.11■□□□□ 0.17
TTC28-204ENST00000468807 OPRK1P41145 380 aa16.11■□□□□ 0.17
TTC28-204ENST00000468807 RPL11P62913 178 aaKnown RBP16.11■□□□□ 0.17
TTC28-204ENST00000468807 PAFAH1B2P68402 229 aa16.11■□□□□ 0.17
TTC28-204ENST00000468807 SSBP1Q04837 148 aaKnown RBP16.11■□□□□ 0.17
TTC28-204ENST00000468807 ST8SIA2Q92186 375 aa16.11■□□□□ 0.17
TTC28-204ENST00000468807 INS-IGF2F8WCM5 200 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms