RNA–Protein interactions for RNA: ENST00000468792.1

COL6A3-208, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 329 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-208ENST00000468792 OR5G3P0C626 314 aa6.11□□□□□ -1.43
COL6A3-208ENST00000468792 MYOD1P15172 320 aa6.11□□□□□ -1.43
COL6A3-208ENST00000468792 RPL27AP46776 148 aaKnown RBP6.11□□□□□ -1.43
COL6A3-208ENST00000468792 UQCRFS1P47985 274 aa6.11□□□□□ -1.43
COL6A3-208ENST00000468792 RND2P52198 227 aa6.11□□□□□ -1.43
COL6A3-208ENST00000468792 TMEM241Q24JQ0 296 aa6.11□□□□□ -1.43
COL6A3-208ENST00000468792 HCP5Q6MZN7 132 aa6.11□□□□□ -1.43
COL6A3-208ENST00000468792 SPNS3Q6ZMD2 512 aa6.11□□□□□ -1.43
COL6A3-208ENST00000468792 PQLC2Q6ZP29 291 aa6.11□□□□□ -1.43
COL6A3-208ENST00000468792 SLC16A13Q7RTY0 426 aa6.11□□□□□ -1.43
COL6A3-208ENST00000468792 MOB3BQ86TA1 216 aa6.11□□□□□ -1.43
COL6A3-208ENST00000468792 TMEM116Q8NCL8 245 aa6.11□□□□□ -1.43
COL6A3-208ENST00000468792 OR10W1Q8NGF6 305 aa6.11□□□□□ -1.43
COL6A3-208ENST00000468792 CFHR4Q92496 578 aa6.11□□□□□ -1.43
COL6A3-208ENST00000468792 HIST1H2BAQ96A08 127 aa6.11□□□□□ -1.43
COL6A3-208ENST00000468792 SPOCK3Q9BQ16 436 aa6.11□□□□□ -1.43
COL6A3-208ENST00000468792 TMEM167BQ9NRX6 74 aa6.11□□□□□ -1.43
COL6A3-208ENST00000468792 ONECUT1Q9UBC0 465 aa6.11□□□□□ -1.43
COL6A3-208ENST00000468792 FUT9Q9Y231 359 aa6.11□□□□□ -1.43
COL6A3-208ENST00000468792 TBL2Q9Y4P3 447 aaKnown RBP6.11□□□□□ -1.43
COL6A3-208ENST00000468792 ACACBO00763 2458 aa6.1□□□□□ -1.43
COL6A3-208ENST00000468792 DOPEY1Q5JWR5 2465 aa6.1□□□□□ -1.43
COL6A3-208ENST00000468792 TCRBV4S1A1TA0A5B7 111 aa6.1□□□□□ -1.43
COL6A3-208ENST00000468792 PSMB11A5LHX3 300 aa6.1□□□□□ -1.43
COL6A3-208ENST00000468792 ZNF727A8MUV8 499 aa6.1□□□□□ -1.43
COL6A3-208ENST00000468792 C11orf94C9JXX5 98 aa6.1□□□□□ -1.43
COL6A3-208ENST00000468792 NDUFS8O00217 210 aa6.1□□□□□ -1.43
COL6A3-208ENST00000468792 PAGE4O60829 102 aa6.1□□□□□ -1.43
COL6A3-208ENST00000468792 OR2C1O95371 312 aa6.1□□□□□ -1.43
COL6A3-208ENST00000468792 CRYBA1P05813 215 aa6.1□□□□□ -1.43
COL6A3-208ENST00000468792 CD99P14209 185 aa6.1□□□□□ -1.43
COL6A3-208ENST00000468792 GCHFRP30047 84 aa6.1□□□□□ -1.43
COL6A3-208ENST00000468792 TAS2R45P59539 299 aa6.1□□□□□ -1.43
COL6A3-208ENST00000468792 ARF6P62330 175 aa6.1□□□□□ -1.43
COL6A3-208ENST00000468792 OR1L4Q8NGR5 311 aa6.1□□□□□ -1.43
COL6A3-208ENST00000468792 ABHD5Q8WTS1 349 aa6.1□□□□□ -1.43
COL6A3-208ENST00000468792 C11orf52Q96A22 123 aa6.1□□□□□ -1.43
COL6A3-208ENST00000468792 RITA1Q96K30 269 aa6.1□□□□□ -1.43
COL6A3-208ENST00000468792 PFDN5Q99471 154 aa6.1□□□□□ -1.43
COL6A3-208ENST00000468792 TRGV9Q99603 122 aa6.1□□□□□ -1.43
COL6A3-208ENST00000468792 SMIM7Q9BQ49 75 aa6.1□□□□□ -1.43
COL6A3-208ENST00000468792 TMPRSS5Q9H3S3 457 aa6.1□□□□□ -1.43
COL6A3-208ENST00000468792 TECRQ9NZ01 308 aaKnown RBP6.1□□□□□ -1.43
COL6A3-208ENST00000468792 MLXQ9UH92 298 aa6.1□□□□□ -1.43
COL6A3-208ENST00000468792 LY96Q9Y6Y9 160 aa6.1□□□□□ -1.43
COL6A3-208ENST00000468792 TRBV24-1A0A075B6N3 115 aa6.09□□□□□ -1.43
COL6A3-208ENST00000468792 ELOA3CA0A087WX78 387 aaPredicted RBP6.09□□□□□ -1.43
COL6A3-208ENST00000468792 IGHV2-70DA0A0C4DH43 119 aa6.09□□□□□ -1.43
COL6A3-208ENST00000468792 TEX22C9J3V5 150 aa6.09□□□□□ -1.43
COL6A3-208ENST00000468792 CLDN34H7C241 214 aa6.09□□□□□ -1.43
COL6A3-208ENST00000468792 C19orf84I3L1E1 186 aa6.09□□□□□ -1.43
COL6A3-208ENST00000468792 TIMM23O14925 209 aa6.09□□□□□ -1.43
COL6A3-208ENST00000468792 FOXH1O75593 365 aa6.09□□□□□ -1.43
COL6A3-208ENST00000468792 LY6HO94772 140 aa6.09□□□□□ -1.43
COL6A3-208ENST00000468792 MOSP00540 346 aa6.09□□□□□ -1.43
COL6A3-208ENST00000468792 OPN1MWP04001 364 aa6.09□□□□□ -1.43
COL6A3-208ENST00000468792 ARL14EPLP0DKL9 152 aa6.09□□□□□ -1.43
COL6A3-208ENST00000468792 OPN1MW2P0DN77 364 aa6.09□□□□□ -1.43
COL6A3-208ENST00000468792 OPN1MW3P0DN78 364 aa6.09□□□□□ -1.43
COL6A3-208ENST00000468792 PAX1P15863 534 aa6.09□□□□□ -1.43
COL6A3-208ENST00000468792 CTRB1P17538 263 aa6.09□□□□□ -1.43
COL6A3-208ENST00000468792 RAB5AP20339 215 aa6.09□□□□□ -1.43
COL6A3-208ENST00000468792 COX7A1P24310 79 aa6.09□□□□□ -1.43
COL6A3-208ENST00000468792 OR10J1P30954 320 aa6.09□□□□□ -1.43
COL6A3-208ENST00000468792 PLA2G5P39877 138 aa6.09□□□□□ -1.43
COL6A3-208ENST00000468792 UBE2E1P51965 193 aa6.09□□□□□ -1.43
COL6A3-208ENST00000468792 PLP1P60201 277 aa6.09□□□□□ -1.43
COL6A3-208ENST00000468792 RAB5BP61020 215 aa6.09□□□□□ -1.43
COL6A3-208ENST00000468792 LMO4P61968 165 aa6.09□□□□□ -1.43
COL6A3-208ENST00000468792 KLK9Q2XQG4 91 aa6.09□□□□□ -1.43
COL6A3-208ENST00000468792 GCSAMLQ5JQS6 135 aa6.09□□□□□ -1.43
COL6A3-208ENST00000468792 LDLRAD2Q5SZI1 272 aa6.09□□□□□ -1.43
COL6A3-208ENST00000468792 CTRB2Q6GPI1 263 aa6.09□□□□□ -1.43
COL6A3-208ENST00000468792 Q8N6K4 173 aa6.09□□□□□ -1.43
COL6A3-208ENST00000468792 STXBP6Q8NFX7 210 aa6.09□□□□□ -1.43
COL6A3-208ENST00000468792 OR2T10Q8NGZ9 312 aa6.09□□□□□ -1.43
COL6A3-208ENST00000468792 OR4F5Q8NH21 305 aa6.09□□□□□ -1.43
COL6A3-208ENST00000468792 SSMEM1Q8WWF3 244 aa6.09□□□□□ -1.43
COL6A3-208ENST00000468792 C22orf15Q8WYQ4 148 aa6.09□□□□□ -1.43
COL6A3-208ENST00000468792 ANAPC16Q96DE5 110 aa6.09□□□□□ -1.43
COL6A3-208ENST00000468792 FAM122AQ96E09 287 aa6.09□□□□□ -1.43
COL6A3-208ENST00000468792 OR4F4Q96R69 305 aa6.09□□□□□ -1.43
COL6A3-208ENST00000468792 TCEAL7Q9BRU2 100 aa6.09□□□□□ -1.43
COL6A3-208ENST00000468792 SLC25A33Q9BSK2 321 aa6.09□□□□□ -1.43
COL6A3-208ENST00000468792 SIRPDQ9H106 197 aa6.09□□□□□ -1.43
COL6A3-208ENST00000468792 PARLQ9H300 379 aa6.09□□□□□ -1.43
COL6A3-208ENST00000468792 FNDC4Q9H6D8 234 aaPredicted RBP6.09□□□□□ -1.43
COL6A3-208ENST00000468792 UBTD1Q9HAC8 227 aa6.09□□□□□ -1.43
COL6A3-208ENST00000468792 SEPSECSQ9HD40 501 aaKnown RBP6.09□□□□□ -1.43
COL6A3-208ENST00000468792 DNAJC4Q9NNZ3 241 aa6.09□□□□□ -1.43
COL6A3-208ENST00000468792 METTL1Q9UBP6 276 aaKnown RBP6.09□□□□□ -1.43
COL6A3-208ENST00000468792 KLK9Q9UKQ9 250 aa6.09□□□□□ -1.43
COL6A3-208ENST00000468792 F11RQ9Y624 299 aaKnown RBP6.09□□□□□ -1.43
COL6A3-208ENST00000468792 IGKV1D-37A0A075B6S9 117 aa6.08□□□□□ -1.44
COL6A3-208ENST00000468792 A0A1W2PRE2 83 aa6.08□□□□□ -1.44
COL6A3-208ENST00000468792 C1orf196B1AJZ1 125 aa6.08□□□□□ -1.44
COL6A3-208ENST00000468792 NBR2O15453 112 aa6.08□□□□□ -1.44
COL6A3-208ENST00000468792 C8orf88P0DMB2 117 aa6.08□□□□□ -1.44
COL6A3-208ENST00000468792 ZFP36P26651 326 aaKnown RBP6.08□□□□□ -1.44
COL6A3-208ENST00000468792 CDKN1AP38936 164 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms