RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 LYL1P12980 280 aa14.37□□□□□ -0.11
COL7A1-207ENST00000467985 EDN2P20800 178 aa14.37□□□□□ -0.11
COL7A1-207ENST00000467985 PIGPP57054 158 aa14.37□□□□□ -0.11
COL7A1-207ENST00000467985 RND3P61587 244 aa14.37□□□□□ -0.11
COL7A1-207ENST00000467985 ANKRD55Q3KP44 614 aa14.37□□□□□ -0.11
COL7A1-207ENST00000467985 TMED4Q7Z7H5 227 aa14.37□□□□□ -0.11
COL7A1-207ENST00000467985 OR1P1Q8NH06 330 aa14.37□□□□□ -0.11
COL7A1-207ENST00000467985 WDR89Q96FK6 387 aaPredicted RBP14.37□□□□□ -0.11
COL7A1-207ENST00000467985 ZNF436Q9C0F3 470 aaPredicted RBP14.37□□□□□ -0.11
COL7A1-207ENST00000467985 MRPL27Q9P0M9 148 aaKnown RBP14.37□□□□□ -0.11
COL7A1-207ENST00000467985 CSMD3Q7Z407 3707 aa14.37□□□□□ -0.11
COL7A1-207ENST00000467985 TRAV25A0A0B4J276 109 aa14.36□□□□□ -0.11
COL7A1-207ENST00000467985 OR11H12B2RN74 326 aa14.36□□□□□ -0.11
COL7A1-207ENST00000467985 NDUFB6O95139 128 aa14.36□□□□□ -0.11
COL7A1-207ENST00000467985 CD7P09564 240 aa14.36□□□□□ -0.11
COL7A1-207ENST00000467985 C8orf88P0DMB2 117 aa14.36□□□□□ -0.11
COL7A1-207ENST00000467985 TM4SF20Q53R12 229 aa14.36□□□□□ -0.11
COL7A1-207ENST00000467985 CASC10Q5T4H9 136 aa14.36□□□□□ -0.11
COL7A1-207ENST00000467985 UNQ9165/PRO28630Q6UXU0 137 aa14.36□□□□□ -0.11
COL7A1-207ENST00000467985 LINC00322Q6ZN03 302 aaPredicted RBP14.36□□□□□ -0.11
COL7A1-207ENST00000467985 TMEM61Q8N0U2 210 aa14.36□□□□□ -0.11
COL7A1-207ENST00000467985 GAR1Q9NY12 217 aaKnown RBP14.36□□□□□ -0.11
COL7A1-207ENST00000467985 C21orf62Q9NYP8 219 aa14.36□□□□□ -0.11
COL7A1-207ENST00000467985 MLXQ9UH92 298 aa14.36□□□□□ -0.11
COL7A1-207ENST00000467985 TEX13DA0A0J9YY54 714 aaPredicted RBP14.35□□□□□ -0.11
COL7A1-207ENST00000467985 OR2T8A6NH00 312 aa14.35□□□□□ -0.11
COL7A1-207ENST00000467985 ATG12O94817 140 aa14.35□□□□□ -0.11
COL7A1-207ENST00000467985 BTCP35070 178 aa14.35□□□□□ -0.11
COL7A1-207ENST00000467985 MFAP2P55001 183 aa14.35□□□□□ -0.11
COL7A1-207ENST00000467985 CENPSQ8N2Z9 138 aa14.35□□□□□ -0.11
COL7A1-207ENST00000467985 SCARB1Q8WTV0 552 aa14.35□□□□□ -0.11
COL7A1-207ENST00000467985 TMEM190Q8WZ59 177 aa14.35□□□□□ -0.11
COL7A1-207ENST00000467985 MRGPRFQ96AM1 343 aa14.35□□□□□ -0.11
COL7A1-207ENST00000467985 GPR132Q9UNW8 380 aa14.35□□□□□ -0.11
COL7A1-207ENST00000467985 DBX1A6NMT0 343 aa14.34□□□□□ -0.11
COL7A1-207ENST00000467985 IGKV1-39P01597 117 aa14.34□□□□□ -0.11
COL7A1-207ENST00000467985 IGKV1D-39P04432 117 aa14.34□□□□□ -0.11
COL7A1-207ENST00000467985 AKR1C4P17516 323 aa14.34□□□□□ -0.11
COL7A1-207ENST00000467985 PRCDQ00LT1 54 aa14.34□□□□□ -0.11
COL7A1-207ENST00000467985 BTNL8Q6UX41 500 aa14.34□□□□□ -0.11
COL7A1-207ENST00000467985 RBPMS2Q6ZRY4 209 aaKnown RBP14.34□□□□□ -0.11
COL7A1-207ENST00000467985 DEFB125Q8N687 156 aa14.34□□□□□ -0.11
COL7A1-207ENST00000467985 OR52B4Q8NGK2 314 aa14.34□□□□□ -0.11
COL7A1-207ENST00000467985 SRD5A3Q9H8P0 318 aa14.34□□□□□ -0.11
COL7A1-207ENST00000467985 DAZ1Q9NQZ3 744 aaKnown RBP14.34□□□□□ -0.11
COL7A1-207ENST00000467985 IGHV3-35A0A0C4DH35 117 aa14.33□□□□□ -0.12
COL7A1-207ENST00000467985 K7EIM0 57 aa14.33□□□□□ -0.12
COL7A1-207ENST00000467985 NDUFA4O00483 81 aa14.33□□□□□ -0.12
COL7A1-207ENST00000467985 TCRBP04435 133 aa14.33□□□□□ -0.12
COL7A1-207ENST00000467985 HSPE1P61604 102 aaKnown RBP14.33□□□□□ -0.12
COL7A1-207ENST00000467985 OR2C3Q8N628 320 aa14.33□□□□□ -0.12
COL7A1-207ENST00000467985 ZNF114Q8NC26 417 aa14.33□□□□□ -0.12
COL7A1-207ENST00000467985 C20orf85Q9H1P6 137 aa14.33□□□□□ -0.12
COL7A1-207ENST00000467985 C5orf66Q9H5L9 145 aa14.33□□□□□ -0.12
COL7A1-207ENST00000467985 EDA2RQ9HAV5 297 aa14.33□□□□□ -0.12
COL7A1-207ENST00000467985 NUDT15Q9NV35 164 aa14.33□□□□□ -0.12
COL7A1-207ENST00000467985 TRAV6A0A075B6T7 132 aa14.32□□□□□ -0.12
COL7A1-207ENST00000467985 B3GALNT1O75752 331 aa14.32□□□□□ -0.12
COL7A1-207ENST00000467985 Q56UQ5 140 aa14.32□□□□□ -0.12
COL7A1-207ENST00000467985 UBAC2Q8NBM4 344 aa14.32□□□□□ -0.12
COL7A1-207ENST00000467985 TXN2Q99757 166 aa14.32□□□□□ -0.12
COL7A1-207ENST00000467985 RTBDNQ9BSG5 229 aaPredicted RBP14.32□□□□□ -0.12
COL7A1-207ENST00000467985 IGHV3-21A0A0B4J1V1 117 aa14.31□□□□□ -0.12
COL7A1-207ENST00000467985 C3orf85A0A1B0GTC6 90 aa14.31□□□□□ -0.12
COL7A1-207ENST00000467985 RBMY1BA6NDE4 496 aaKnown RBP14.31□□□□□ -0.12
COL7A1-207ENST00000467985 RBMY1EA6NEQ0 496 aaKnown RBP14.31□□□□□ -0.12
COL7A1-207ENST00000467985 SCAF4O95104 1147 aaKnown RBP14.31□□□□□ -0.12
COL7A1-207ENST00000467985 RBMY1DP0C7P1 496 aaKnown RBP14.31□□□□□ -0.12
COL7A1-207ENST00000467985 VAMP1P23763 118 aa14.31□□□□□ -0.12
COL7A1-207ENST00000467985 ERHP84090 104 aaKnown RBP14.31□□□□□ -0.12
COL7A1-207ENST00000467985 RELQ04864 619 aaPredicted RBP14.31□□□□□ -0.12
COL7A1-207ENST00000467985 RGS21Q2M5E4 152 aa14.31□□□□□ -0.12
COL7A1-207ENST00000467985 NRARPQ7Z6K4 114 aa14.31□□□□□ -0.12
COL7A1-207ENST00000467985 CHRDL1Q9BU40 450 aa14.31□□□□□ -0.12
COL7A1-207ENST00000467985 HIPK2Q9H2X6 1198 aa14.31□□□□□ -0.12
COL7A1-207ENST00000467985 NAA60Q9H7X0 242 aa14.31□□□□□ -0.12
COL7A1-207ENST00000467985 FLVCR2Q9UPI3 526 aa14.31□□□□□ -0.12
COL7A1-207ENST00000467985 KCNIP3Q9Y2W7 256 aa14.31□□□□□ -0.12
COL7A1-207ENST00000467985 F8W735 103 aaPredicted RBP14.3□□□□□ -0.12
COL7A1-207ENST00000467985 K7EMT4 169 aa14.3□□□□□ -0.12
COL7A1-207ENST00000467985 PTTG1O95997 202 aa14.3□□□□□ -0.12
COL7A1-207ENST00000467985 H2AFB2P0C5Z0 115 aa14.3□□□□□ -0.12
COL7A1-207ENST00000467985 ANXA3P12429 323 aa14.3□□□□□ -0.12
COL7A1-207ENST00000467985 FCGR2BP31994 310 aaPredicted RBP14.3□□□□□ -0.12
COL7A1-207ENST00000467985 ADMP35318 185 aa14.3□□□□□ -0.12
COL7A1-207ENST00000467985 AKR1C2P52895 323 aa14.3□□□□□ -0.12
COL7A1-207ENST00000467985 MFAP4P55083 255 aa14.3□□□□□ -0.12
COL7A1-207ENST00000467985 TRIM16LQ309B1 348 aa14.3□□□□□ -0.12
COL7A1-207ENST00000467985 LAMTOR1Q6IAA8 161 aa14.3□□□□□ -0.12
COL7A1-207ENST00000467985 MISP3Q96FF7 219 aa14.3□□□□□ -0.12
COL7A1-207ENST00000467985 TP53RKQ96S44 253 aa14.3□□□□□ -0.12
COL7A1-207ENST00000467985 SPAG8Q99932 426 aaPredicted RBP14.3□□□□□ -0.12
COL7A1-207ENST00000467985 WFDC10AQ9H1F0 79 aa14.3□□□□□ -0.12
COL7A1-207ENST00000467985 SELENOKQ9Y6D0 94 aa14.3□□□□□ -0.12
COL7A1-207ENST00000467985 CRYM-AS1A6NIL9 109 aa14.29□□□□□ -0.12
COL7A1-207ENST00000467985 C15orf62A8K5M9 175 aa14.29□□□□□ -0.12
COL7A1-207ENST00000467985 I3L2K1 104 aa14.29□□□□□ -0.12
COL7A1-207ENST00000467985 NUPL2O15504 423 aaKnown RBP14.29□□□□□ -0.12
COL7A1-207ENST00000467985 IGKV1-5P01602 117 aa14.29□□□□□ -0.12
COL7A1-207ENST00000467985 CTSGP08311 255 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms