RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 ZNF585BQ52M93 769 aa5.51□□□□□ -1.53
SCAF4-204ENST00000467731 OCIAD2Q56VL3 154 aa5.51□□□□□ -1.53
SCAF4-204ENST00000467731 C9orf139Q6ZV77 190 aa5.51□□□□□ -1.53
SCAF4-204ENST00000467731 MEGF9Q9H1U4 602 aa5.51□□□□□ -1.53
SCAF4-204ENST00000467731 POMT1Q9Y6A1 747 aa5.51□□□□□ -1.53
SCAF4-204ENST00000467731 INAFM1C9JVW0 142 aa5.5□□□□□ -1.53
SCAF4-204ENST00000467731 FGF16O43320 207 aa5.5□□□□□ -1.53
SCAF4-204ENST00000467731 CREBL2O60519 120 aaPredicted RBP5.5□□□□□ -1.53
SCAF4-204ENST00000467731 S1PR2O95136 353 aa5.5□□□□□ -1.53
SCAF4-204ENST00000467731 VENTXO95231 258 aa5.5□□□□□ -1.53
SCAF4-204ENST00000467731 DUS4LO95620 317 aaKnown RBP5.5□□□□□ -1.53
SCAF4-204ENST00000467731 IGKV1D-33P01593 117 aa5.5□□□□□ -1.53
SCAF4-204ENST00000467731 IGKV1-33P01594 117 aa5.5□□□□□ -1.53
SCAF4-204ENST00000467731 SERPINE2P07093 398 aa5.5□□□□□ -1.53
SCAF4-204ENST00000467731 UCP1P25874 307 aa5.5□□□□□ -1.53
SCAF4-204ENST00000467731 RPL29P47914 159 aaKnown RBP5.5□□□□□ -1.53
SCAF4-204ENST00000467731 RPS20P60866 119 aaKnown RBP5.5□□□□□ -1.53
SCAF4-204ENST00000467731 SRSF3P84103 164 aaKnown RBP5.5□□□□□ -1.53
SCAF4-204ENST00000467731 ANKRD55Q3KP44 614 aa5.5□□□□□ -1.53
SCAF4-204ENST00000467731 TCTEX1D1Q8N7M0 179 aa5.5□□□□□ -1.53
SCAF4-204ENST00000467731 OR4S2Q8NH73 311 aa5.5□□□□□ -1.53
SCAF4-204ENST00000467731 CACNG8Q8WXS5 425 aa5.5□□□□□ -1.53
SCAF4-204ENST00000467731 TMEM140Q9NV12 185 aa5.5□□□□□ -1.53
SCAF4-204ENST00000467731 PGPEP1Q9NXJ5 209 aa5.5□□□□□ -1.53
SCAF4-204ENST00000467731 WASHC3Q9Y3C0 194 aa5.5□□□□□ -1.53
SCAF4-204ENST00000467731 ZNF705GA8MUZ8 300 aaPredicted RBP5.5□□□□□ -1.53
SCAF4-204ENST00000467731 K7ERU9 68 aa5.5□□□□□ -1.53
SCAF4-204ENST00000467731 CDS2O95674 445 aa5.5□□□□□ -1.53
SCAF4-204ENST00000467731 IGKV1-39P01597 117 aa5.5□□□□□ -1.53
SCAF4-204ENST00000467731 IGKV1D-39P04432 117 aa5.5□□□□□ -1.53
SCAF4-204ENST00000467731 SCGB1A1P11684 91 aa5.5□□□□□ -1.53
SCAF4-204ENST00000467731 KIR2DS2P43631 304 aa5.5□□□□□ -1.53
SCAF4-204ENST00000467731 LPAR6P43657 344 aa5.5□□□□□ -1.53
SCAF4-204ENST00000467731 PJVKQ0ZLH3 352 aa5.5□□□□□ -1.53
SCAF4-204ENST00000467731 HES1Q14469 280 aa5.5□□□□□ -1.53
SCAF4-204ENST00000467731 PSG3Q16557 428 aa5.5□□□□□ -1.53
SCAF4-204ENST00000467731 C1orf194Q5T5A4 169 aa5.5□□□□□ -1.53
SCAF4-204ENST00000467731 LIAT1Q6ZQX7 453 aa5.5□□□□□ -1.53
SCAF4-204ENST00000467731 SLC35E3Q7Z769 313 aa5.5□□□□□ -1.53
SCAF4-204ENST00000467731 PDPNQ86YL7 162 aa5.5□□□□□ -1.53
SCAF4-204ENST00000467731 OR4C13Q8NGP0 309 aa5.5□□□□□ -1.53
SCAF4-204ENST00000467731 MITD1Q8WV92 249 aa5.5□□□□□ -1.53
SCAF4-204ENST00000467731 ISOC2Q96AB3 205 aa5.5□□□□□ -1.53
SCAF4-204ENST00000467731 RPUSD4Q96CM3 377 aaKnown RBP5.5□□□□□ -1.53
SCAF4-204ENST00000467731 RITA1Q96K30 269 aa5.5□□□□□ -1.53
SCAF4-204ENST00000467731 ARV1Q9H2C2 271 aa5.5□□□□□ -1.53
SCAF4-204ENST00000467731 PLEKHA2Q9HB19 425 aa5.5□□□□□ -1.53
SCAF4-204ENST00000467731 GPN1Q9HCN4 374 aaPredicted RBP5.5□□□□□ -1.53
SCAF4-204ENST00000467731 HSPB7Q9UBY9 170 aa5.5□□□□□ -1.53
SCAF4-204ENST00000467731 TET2Q6N021 2002 aaPredicted RBP5.5□□□□□ -1.53
SCAF4-204ENST00000467731 C7orf77A4D0Y5 90 aa5.49□□□□□ -1.53
SCAF4-204ENST00000467731 FAM90A9PA6NNJ1 464 aa5.49□□□□□ -1.53
SCAF4-204ENST00000467731 M0QZ24 198 aa5.49□□□□□ -1.53
SCAF4-204ENST00000467731 RBFOX2O43251 390 aaKnown RBP eCLIP5.49□□□□□ -1.535e-7■■□□□ 14.3
SCAF4-204ENST00000467731 HPRT1P00492 218 aa5.49□□□□□ -1.53
SCAF4-204ENST00000467731 RPS10P46783 165 aaKnown RBP5.49□□□□□ -1.53
SCAF4-204ENST00000467731 TMEM268Q5VZI3 342 aa5.49□□□□□ -1.53
SCAF4-204ENST00000467731 VKORC1L1Q8N0U8 176 aa5.49□□□□□ -1.53
SCAF4-204ENST00000467731 FLYWCH2Q96CP2 140 aaKnown RBP5.49□□□□□ -1.53
SCAF4-204ENST00000467731 HARBI1Q96MB7 349 aa5.49□□□□□ -1.53
SCAF4-204ENST00000467731 HIST1H2BLQ99880 126 aa5.49□□□□□ -1.53
SCAF4-204ENST00000467731 CDC42EP3Q9UKI2 254 aa5.49□□□□□ -1.53
SCAF4-204ENST00000467731 SRRM4A7MD48 611 aaKnown RBP5.49□□□□□ -1.53
SCAF4-204ENST00000467731 SNRPGP15A8MWD9 76 aa5.49□□□□□ -1.53
SCAF4-204ENST00000467731 TOMM40O96008 361 aa5.49□□□□□ -1.53
SCAF4-204ENST00000467731 KRASP01116 189 aa5.49□□□□□ -1.53
SCAF4-204ENST00000467731 CNTFRP26992 372 aa5.49□□□□□ -1.53
SCAF4-204ENST00000467731 CRYBA4P53673 196 aa5.49□□□□□ -1.53
SCAF4-204ENST00000467731 RPS16P62249 146 aaKnown RBP5.49□□□□□ -1.53
SCAF4-204ENST00000467731 LRRC75BQ2VPJ9 315 aa5.49□□□□□ -1.53
SCAF4-204ENST00000467731 TMEM177Q53S58 311 aa5.49□□□□□ -1.53
SCAF4-204ENST00000467731 PDZD11Q5EBL8 140 aa5.49□□□□□ -1.53
SCAF4-204ENST00000467731 ZNF705AQ6ZN79 300 aaPredicted RBP5.49□□□□□ -1.53
SCAF4-204ENST00000467731 ZNF695Q8IW36 515 aa5.49□□□□□ -1.53
SCAF4-204ENST00000467731 MRPL41Q8IXM3 137 aaKnown RBP5.49□□□□□ -1.53
SCAF4-204ENST00000467731 SLC35G3Q8N808 338 aa5.49□□□□□ -1.53
SCAF4-204ENST00000467731 OR4C5Q8NGB2 326 aa5.49□□□□□ -1.53
SCAF4-204ENST00000467731 PIFOQ8TCI5 191 aa5.49□□□□□ -1.53
SCAF4-204ENST00000467731 CACFD1Q9UGQ2 172 aa5.49□□□□□ -1.53
SCAF4-204ENST00000467731 KANTRA0A1W2PQU2 76 aa5.49□□□□□ -1.53
SCAF4-204ENST00000467731 H3BUX3 64 aa5.49□□□□□ -1.53
SCAF4-204ENST00000467731 HIST1H2BKO60814 126 aa5.49□□□□□ -1.53
SCAF4-204ENST00000467731 MOSP00540 346 aa5.49□□□□□ -1.53
SCAF4-204ENST00000467731 HIST1H2BJP06899 126 aa5.49□□□□□ -1.53
SCAF4-204ENST00000467731 SFTA3P0C7M3 94 aa5.49□□□□□ -1.53
SCAF4-204ENST00000467731 SRD5A1P18405 259 aa5.49□□□□□ -1.53
SCAF4-204ENST00000467731 HIST1H2BOP23527 126 aa5.49□□□□□ -1.53
SCAF4-204ENST00000467731 HIST1H2BBP33778 126 aa5.49□□□□□ -1.53
SCAF4-204ENST00000467731 G6PCP35575 357 aa5.49□□□□□ -1.53
SCAF4-204ENST00000467731 DYNLT3P51808 116 aa5.49□□□□□ -1.53
SCAF4-204ENST00000467731 HIST1H2BDP58876 126 aa5.49□□□□□ -1.53
SCAF4-204ENST00000467731 HIST1H2BCP62807 126 aa5.49□□□□□ -1.53
SCAF4-204ENST00000467731 EBI3Q14213 229 aa5.49□□□□□ -1.53
SCAF4-204ENST00000467731 HIST2H2BEQ16778 126 aa5.49□□□□□ -1.53
SCAF4-204ENST00000467731 TMEM241Q24JQ0 296 aa5.49□□□□□ -1.53
SCAF4-204ENST00000467731 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.49□□□□□ -1.53
SCAF4-204ENST00000467731 GFI1BQ5VTD9 330 aa5.49□□□□□ -1.53
SCAF4-204ENST00000467731 LYZL2Q7Z4W2 148 aa5.49□□□□□ -1.53
SCAF4-204ENST00000467731 LGI3Q8N145 548 aa5.49□□□□□ -1.53
SCAF4-204ENST00000467731 LRTM2Q8N967 370 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms