RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 TMEM56Q96MV1 263 aa4.03□□□□□ -1.76
PTCD3-207ENST00000467273 CNN2Q99439 309 aaKnown RBP4.03□□□□□ -1.76
PTCD3-207ENST00000467273 PFDN5Q99471 154 aa4.03□□□□□ -1.76
PTCD3-207ENST00000467273 GGTLC1Q9BX51 225 aa4.03□□□□□ -1.76
PTCD3-207ENST00000467273 TSSK6Q9BXA6 273 aa4.03□□□□□ -1.76
PTCD3-207ENST00000467273 YIPF3Q9GZM5 350 aa4.03□□□□□ -1.76
PTCD3-207ENST00000467273 CHST5Q9GZS9 411 aa4.03□□□□□ -1.76
PTCD3-207ENST00000467273 RBFOX1Q9NWB1 397 aaKnown RBP4.03□□□□□ -1.76
PTCD3-207ENST00000467273 TECRQ9NZ01 308 aaKnown RBP4.03□□□□□ -1.76
PTCD3-207ENST00000467273 MGAT4AQ9UM21 535 aa4.03□□□□□ -1.76
PTCD3-207ENST00000467273 PRELID3BQ9Y3B1 194 aa4.03□□□□□ -1.76
PTCD3-207ENST00000467273 TMEM56-RWDD3S4R434 201 aa4.03□□□□□ -1.76
PTCD3-207ENST00000467273 VPS13DQ5THJ4 4388 aa4.02□□□□□ -1.77
PTCD3-207ENST00000467273 MEIKINA0A087WXM9 373 aa4.02□□□□□ -1.77
PTCD3-207ENST00000467273 LOC102724200A0A096LPH7 203 aaPredicted RBP4.02□□□□□ -1.77
PTCD3-207ENST00000467273 MSGN1A6NI15 193 aa4.02□□□□□ -1.77
PTCD3-207ENST00000467273 H3BUA1 57 aa4.02□□□□□ -1.77
PTCD3-207ENST00000467273 SRSF10O75494 262 aaKnown RBP4.02□□□□□ -1.77
PTCD3-207ENST00000467273 TFAP2AP05549 437 aa4.02□□□□□ -1.77
PTCD3-207ENST00000467273 SLC2A2P11168 524 aaPredicted RBP4.02□□□□□ -1.77
PTCD3-207ENST00000467273 BCL3P20749 454 aa4.02□□□□□ -1.77
PTCD3-207ENST00000467273 BLVRBP30043 206 aaPredicted RBP4.02□□□□□ -1.77
PTCD3-207ENST00000467273 VHLP40337 213 aa4.02□□□□□ -1.77
PTCD3-207ENST00000467273 GLP1RP43220 463 aa4.02□□□□□ -1.77
PTCD3-207ENST00000467273 RPL5P46777 297 aaKnown RBP4.02□□□□□ -1.77
PTCD3-207ENST00000467273 OR3A3P47888 321 aa4.02□□□□□ -1.77
PTCD3-207ENST00000467273 REG1BP48304 166 aa4.02□□□□□ -1.77
PTCD3-207ENST00000467273 CRISP1P54107 249 aa4.02□□□□□ -1.77
PTCD3-207ENST00000467273 TPPP2P59282 170 aa4.02□□□□□ -1.77
PTCD3-207ENST00000467273 GNG2P59768 71 aa4.02□□□□□ -1.77
PTCD3-207ENST00000467273 ATXN7L3Q14CW9 347 aaPredicted RBP4.02□□□□□ -1.77
PTCD3-207ENST00000467273 UBE2V2Q15819 145 aa4.02□□□□□ -1.77
PTCD3-207ENST00000467273 TP53I3Q53FA7 332 aa4.02□□□□□ -1.77
PTCD3-207ENST00000467273 BCL2L15Q5TBC7 163 aa4.02□□□□□ -1.77
PTCD3-207ENST00000467273 C9orf47Q6ZRZ4 202 aa4.02□□□□□ -1.77
PTCD3-207ENST00000467273 Q6ZTC4 211 aa4.02□□□□□ -1.77
PTCD3-207ENST00000467273 SLC16A13Q7RTY0 426 aa4.02□□□□□ -1.77
PTCD3-207ENST00000467273 SAXO1Q8IYX7 474 aa4.02□□□□□ -1.77
PTCD3-207ENST00000467273 DEFB125Q8N687 156 aa4.02□□□□□ -1.77
PTCD3-207ENST00000467273 DMBX1Q8NFW5 382 aa4.02□□□□□ -1.77
PTCD3-207ENST00000467273 OR11H2Q8NH07 326 aa4.02□□□□□ -1.77
PTCD3-207ENST00000467273 LYPD6BQ8NI32 183 aa4.02□□□□□ -1.77
PTCD3-207ENST00000467273 COQ8AQ8NI60 647 aa4.02□□□□□ -1.77
PTCD3-207ENST00000467273 CASTOR1Q8WTX7 329 aa4.02□□□□□ -1.77
PTCD3-207ENST00000467273 LEAP2Q969E1 77 aa4.02□□□□□ -1.77
PTCD3-207ENST00000467273 PHB2Q99623 299 aa4.02□□□□□ -1.77
PTCD3-207ENST00000467273 ATP5SQ99766 215 aa4.02□□□□□ -1.77
PTCD3-207ENST00000467273 KRTAP4-4Q9BYR3 166 aa4.02□□□□□ -1.77
PTCD3-207ENST00000467273 TMBIM4Q9HC24 238 aa4.02□□□□□ -1.77
PTCD3-207ENST00000467273 GOLT1BQ9Y3E0 138 aa4.02□□□□□ -1.77
PTCD3-207ENST00000467273 FBXO7Q9Y3I1 522 aa4.02□□□□□ -1.77
PTCD3-207ENST00000467273 IZUMO1RA6ND01 250 aa4.01□□□□□ -1.77
PTCD3-207ENST00000467273 FAM74A7A6NL05 159 aa4.01□□□□□ -1.77
PTCD3-207ENST00000467273 DEGS1O15121 323 aa4.01□□□□□ -1.77
PTCD3-207ENST00000467273 NDUFA3O95167 84 aa4.01□□□□□ -1.77
PTCD3-207ENST00000467273 IGHV3-11P01762 117 aa4.01□□□□□ -1.77
PTCD3-207ENST00000467273 IGHV3-7P01780 117 aa4.01□□□□□ -1.77
PTCD3-207ENST00000467273 SEMG1P04279 462 aa4.01□□□□□ -1.77
PTCD3-207ENST00000467273 IFNA4P05014 189 aa4.01□□□□□ -1.77
PTCD3-207ENST00000467273 GATA1P15976 413 aaPredicted RBP4.01□□□□□ -1.77
PTCD3-207ENST00000467273 TALDO1P37837 337 aa4.01□□□□□ -1.77
PTCD3-207ENST00000467273 APOC4P55056 127 aa4.01□□□□□ -1.77
PTCD3-207ENST00000467273 SYNJ2BPP57105 145 aa4.01□□□□□ -1.77
PTCD3-207ENST00000467273 ASAH1Q13510 395 aa4.01□□□□□ -1.77
PTCD3-207ENST00000467273 MEF2DQ14814 521 aa4.01□□□□□ -1.77
PTCD3-207ENST00000467273 TAL2Q16559 108 aa4.01□□□□□ -1.77
PTCD3-207ENST00000467273 FAM74A3Q4VXF1 159 aa4.01□□□□□ -1.77
PTCD3-207ENST00000467273 ACTL10Q5JWF8 245 aa4.01□□□□□ -1.77
PTCD3-207ENST00000467273 KRTAP5-4Q6L8H1 288 aa4.01□□□□□ -1.77
PTCD3-207ENST00000467273 Q6P435 159 aa4.01□□□□□ -1.77
PTCD3-207ENST00000467273 SLC25A48Q6ZT89 311 aaKnown RBP4.01□□□□□ -1.77
PTCD3-207ENST00000467273 PRSS35Q8N3Z0 413 aa4.01□□□□□ -1.77
PTCD3-207ENST00000467273 IQCF1Q8N6M8 205 aa4.01□□□□□ -1.77
PTCD3-207ENST00000467273 MAPKAPK5-AS1Q8N8E1 139 aa4.01□□□□□ -1.77
PTCD3-207ENST00000467273 NPBQ8NG41 125 aa4.01□□□□□ -1.77
PTCD3-207ENST00000467273 OR13A1Q8NGR1 328 aa4.01□□□□□ -1.77
PTCD3-207ENST00000467273 OR1B1Q8NGR6 318 aa4.01□□□□□ -1.77
PTCD3-207ENST00000467273 STOML3Q8TAV4 291 aa4.01□□□□□ -1.77
PTCD3-207ENST00000467273 SMIM12Q96EX1 92 aa4.01□□□□□ -1.77
PTCD3-207ENST00000467273 PYURFQ96I23 114 aa4.01□□□□□ -1.77
PTCD3-207ENST00000467273 KCTD14Q9BQ13 255 aaPredicted RBP4.01□□□□□ -1.77
PTCD3-207ENST00000467273 ARL6Q9H0F7 186 aa4.01□□□□□ -1.77
PTCD3-207ENST00000467273 TMEM138Q9NPI0 162 aa4.01□□□□□ -1.77
PTCD3-207ENST00000467273 GSKIPQ9P0R6 139 aa4.01□□□□□ -1.77
PTCD3-207ENST00000467273 GHRLQ9UBU3 117 aa4.01□□□□□ -1.77
PTCD3-207ENST00000467273 R4GMQ9 66 aa4.01□□□□□ -1.77
PTCD3-207ENST00000467273 FAT2Q9NYQ8 4349 aa4.01□□□□□ -1.77
PTCD3-207ENST00000467273 PKD1P98161 4303 aa4□□□□□ -1.77
PTCD3-207ENST00000467273 ZNF736B4DX44 427 aaPredicted RBP4□□□□□ -1.77
PTCD3-207ENST00000467273 NME4O00746 187 aa4□□□□□ -1.77
PTCD3-207ENST00000467273 SLC22A1O15245 554 aa4□□□□□ -1.77
PTCD3-207ENST00000467273 ATP5LO75964 103 aa4□□□□□ -1.77
PTCD3-207ENST00000467273 CA1P00915 261 aaPredicted RBP4□□□□□ -1.77
PTCD3-207ENST00000467273 TRGV3P03979 118 aa4□□□□□ -1.77
PTCD3-207ENST00000467273 ALPLP05186 524 aa4□□□□□ -1.77
PTCD3-207ENST00000467273 FABP3P05413 133 aa4□□□□□ -1.77
PTCD3-207ENST00000467273 CD7P09564 240 aa4□□□□□ -1.77
PTCD3-207ENST00000467273 SMIM6P0DI80 62 aa4□□□□□ -1.77
PTCD3-207ENST00000467273 HIST1H1EP10412 219 aaKnown RBP4□□□□□ -1.77
PTCD3-207ENST00000467273 MGMTP16455 207 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms