RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 SPANXN5Q5MJ07 72 aa0.28□□□□□ -2.36
SMC4-207ENST00000467263 SPANXN3Q5MJ09 141 aa0.28□□□□□ -2.36
SMC4-207ENST00000467263 RPL22L1Q6P5R6 122 aaKnown RBP0.28□□□□□ -2.36
SMC4-207ENST00000467263 LRRN1Q6UXK5 716 aa0.28□□□□□ -2.36
SMC4-207ENST00000467263 DPPA3Q6W0C5 159 aa0.28□□□□□ -2.36
SMC4-207ENST00000467263 Q6ZS49 121 aa0.28□□□□□ -2.36
SMC4-207ENST00000467263 TMEM156Q8N614 296 aa0.28□□□□□ -2.36
SMC4-207ENST00000467263 PIGXQ8TBF5 258 aa0.28□□□□□ -2.36
SMC4-207ENST00000467263 ULBP3Q9BZM4 244 aa0.28□□□□□ -2.36
SMC4-207ENST00000467263 TP73-AS1Q9UF72 201 aa0.28□□□□□ -2.36
SMC4-207ENST00000467263 NAV2Q8IVL1 2488 aa0.28□□□□□ -2.36
SMC4-207ENST00000467263 MED12Q93074 2177 aa0.28□□□□□ -2.37
SMC4-207ENST00000467263 CLDN25C9JDP6 229 aa0.27□□□□□ -2.37
SMC4-207ENST00000467263 H0Y980 276 aa0.27□□□□□ -2.37
SMC4-207ENST00000467263 M0QZ92 97 aa0.27□□□□□ -2.37
SMC4-207ENST00000467263 CASQ1P31415 396 aa0.27□□□□□ -2.37
SMC4-207ENST00000467263 MED21Q13503 144 aa0.27□□□□□ -2.37
SMC4-207ENST00000467263 KHDC3LQ587J8 217 aa0.27□□□□□ -2.37
SMC4-207ENST00000467263 RNASE10Q5GAN6 216 aaKnown RBP0.27□□□□□ -2.37
SMC4-207ENST00000467263 OR51D1Q8NGF3 324 aa0.27□□□□□ -2.37
SMC4-207ENST00000467263 OR5A1Q8NGJ0 315 aa0.27□□□□□ -2.37
SMC4-207ENST00000467263 MRPL30Q8TCC3 161 aaKnown RBP0.27□□□□□ -2.37
SMC4-207ENST00000467263 DNAJC9Q8WXX5 260 aa0.27□□□□□ -2.37
SMC4-207ENST00000467263 RAB8BQ92930 207 aa0.27□□□□□ -2.37
SMC4-207ENST00000467263 OR51I1Q9H343 314 aa0.27□□□□□ -2.37
SMC4-207ENST00000467263 FGFR1OP2Q9NVK5 253 aa0.27□□□□□ -2.37
SMC4-207ENST00000467263 A0A0D9SG52 128 aa0.26□□□□□ -2.37
SMC4-207ENST00000467263 GOLGA6L19H0YKK7 550 aa0.26□□□□□ -2.37
SMC4-207ENST00000467263 MIFP14174 115 aa0.26□□□□□ -2.37
SMC4-207ENST00000467263 ZNF25P17030 456 aaPredicted RBP0.26□□□□□ -2.37
SMC4-207ENST00000467263 SFXN4Q6P4A7 337 aa0.26□□□□□ -2.37
SMC4-207ENST00000467263 FAM9CQ8IZT9 166 aa0.26□□□□□ -2.37
SMC4-207ENST00000467263 CMTM6Q9NX76 183 aa0.26□□□□□ -2.37
SMC4-207ENST00000467263 EVC2Q86UK5 1308 aa0.26□□□□□ -2.37
SMC4-207ENST00000467263 FRAS1Q86XX4 4008 aa0.26□□□□□ -2.37
SMC4-207ENST00000467263 TOPBP1Q92547 1522 aa0.26□□□□□ -2.37
SMC4-207ENST00000467263 PEAK1Q9H792 1746 aa0.25□□□□□ -2.37
SMC4-207ENST00000467263 E9PCH4 1651 aa0.25□□□□□ -2.37
SMC4-207ENST00000467263 A0A1B0GV50 99 aa0.25□□□□□ -2.37
SMC4-207ENST00000467263 NCR3O14931 201 aa0.25□□□□□ -2.37
SMC4-207ENST00000467263 INE1O15225 51 aa0.25□□□□□ -2.37
SMC4-207ENST00000467263 UBL3O95164 117 aa0.25□□□□□ -2.37
SMC4-207ENST00000467263 HBA1P69905 142 aa0.25□□□□□ -2.37
SMC4-207ENST00000467263 RHOGP84095 191 aa0.25□□□□□ -2.37
SMC4-207ENST00000467263 RHEBQ15382 184 aa0.25□□□□□ -2.37
SMC4-207ENST00000467263 LPCAT4Q643R3 524 aa0.25□□□□□ -2.37
SMC4-207ENST00000467263 MIR17HGQ75NE6 70 aa0.25□□□□□ -2.37
SMC4-207ENST00000467263 SFT2D1Q8WV19 159 aa0.25□□□□□ -2.37
SMC4-207ENST00000467263 BORCS5Q969J3 196 aa0.25□□□□□ -2.37
SMC4-207ENST00000467263 OPTNQ96CV9 577 aa0.25□□□□□ -2.37
SMC4-207ENST00000467263 IMP4Q96G21 291 aaKnown RBP0.25□□□□□ -2.37
SMC4-207ENST00000467263 XPNPEP1Q9NQW7 623 aa0.25□□□□□ -2.37
SMC4-207ENST00000467263 MAST4O15021 2626 aa0.24□□□□□ -2.37
SMC4-207ENST00000467263 ADGRB2O60241 1585 aa0.24□□□□□ -2.37
SMC4-207ENST00000467263 RIC1Q4ADV7 1423 aa0.24□□□□□ -2.37
SMC4-207ENST00000467263 PQLC2LA1A4F0 135 aa0.24□□□□□ -2.37
SMC4-207ENST00000467263 LYZL6O75951 148 aa0.24□□□□□ -2.37
SMC4-207ENST00000467263 MGST1P10620 155 aaKnown RBP0.24□□□□□ -2.37
SMC4-207ENST00000467263 PMAIP1Q13794 54 aa0.24□□□□□ -2.37
SMC4-207ENST00000467263 TERB2Q8NHR7 220 aa0.24□□□□□ -2.37
SMC4-207ENST00000467263 TMEM70Q9BUB7 260 aa0.24□□□□□ -2.37
SMC4-207ENST00000467263 DRC3Q9H069 523 aa0.24□□□□□ -2.37
SMC4-207ENST00000467263 CDC42SE1Q9NRR8 79 aa0.24□□□□□ -2.37
SMC4-207ENST00000467263 DOCK3Q8IZD9 2030 aa0.24□□□□□ -2.37
SMC4-207ENST00000467263 SULT1B1O43704 296 aa0.23□□□□□ -2.37
SMC4-207ENST00000467263 PRH1P02810 166 aa0.23□□□□□ -2.37
SMC4-207ENST00000467263 BAALC-AS2P0C853 105 aa0.23□□□□□ -2.37
SMC4-207ENST00000467263 OCM2P0CE71 109 aa0.23□□□□□ -2.37
SMC4-207ENST00000467263 COX6A1P12074 109 aa0.23□□□□□ -2.37
SMC4-207ENST00000467263 TCL1AP56279 114 aa0.23□□□□□ -2.37
SMC4-207ENST00000467263 OGFRL1Q5TC84 451 aaPredicted RBP0.23□□□□□ -2.37
SMC4-207ENST00000467263 TEX261Q6UWH6 196 aa0.23□□□□□ -2.37
SMC4-207ENST00000467263 ALKAL1Q6UXT8 129 aa0.23□□□□□ -2.37
SMC4-207ENST00000467263 C10orf95Q9H7T3 257 aa0.23□□□□□ -2.37
SMC4-207ENST00000467263 TAS2R4Q9NYW5 299 aa0.23□□□□□ -2.37
SMC4-207ENST00000467263 U3KQ87 197 aa0.23□□□□□ -2.37
SMC4-207ENST00000467263 CASP8AP2Q9UKL3 1982 aa0.23□□□□□ -2.37
SMC4-207ENST00000467263 NAV3Q8IVL0 2385 aa0.23□□□□□ -2.37
SMC4-207ENST00000467263 A0A0A6YYH2 397 aa0.22□□□□□ -2.37
SMC4-207ENST00000467263 A0A1W2PPM0 123 aa0.22□□□□□ -2.37
SMC4-207ENST00000467263 A6NJ64 397 aa0.22□□□□□ -2.37
SMC4-207ENST00000467263 EEF1E1-BLOC1S5C9J1V9 151 aa0.22□□□□□ -2.37
SMC4-207ENST00000467263 M0QX08 132 aa0.22□□□□□ -2.37
SMC4-207ENST00000467263 KCNK1O00180 336 aa0.22□□□□□ -2.37
SMC4-207ENST00000467263 RAB5BP61020 215 aa0.22□□□□□ -2.37
SMC4-207ENST00000467263 PDPK2PQ6A1A2 396 aa0.22□□□□□ -2.37
SMC4-207ENST00000467263 FAM151BQ6UXP7 276 aa0.22□□□□□ -2.37
SMC4-207ENST00000467263 LRRC25Q8N386 305 aaPredicted RBP0.22□□□□□ -2.37
SMC4-207ENST00000467263 OR13C4Q8NGS5 318 aa0.22□□□□□ -2.37
SMC4-207ENST00000467263 FBXL12Q9NXK8 326 aa0.22□□□□□ -2.37
SMC4-207ENST00000467263 RASL12Q9NYN1 266 aa0.22□□□□□ -2.37
SMC4-207ENST00000467263 DOCK5Q9H7D0 1870 aa0.22□□□□□ -2.37
SMC4-207ENST00000467263 PIK3R4Q99570 1358 aa0.21□□□□□ -2.38
SMC4-207ENST00000467263 TRAV12-1A0A0B4J245 112 aa0.21□□□□□ -2.38
SMC4-207ENST00000467263 LINC00854A0A1B0GVQ3 168 aa0.21□□□□□ -2.38
SMC4-207ENST00000467263 CCDC160A6NGH7 325 aa0.21□□□□□ -2.38
SMC4-207ENST00000467263 LRRN3E7EW58 273 aa0.21□□□□□ -2.38
SMC4-207ENST00000467263 DEXIO95424 95 aa0.21□□□□□ -2.38
SMC4-207ENST00000467263 SRSF6Q13247 344 aaKnown RBP0.21□□□□□ -2.38
SMC4-207ENST00000467263 MPV17LQ2QL34 196 aa0.21□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms