RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 FNDC10F2Z333 226 aa2.49□□□□□ -2.01
VPS13D-203ENST00000466732 H0YJW9 148 aa2.49□□□□□ -2.01
VPS13D-203ENST00000466732 H3BMH7 237 aa2.49□□□□□ -2.01
VPS13D-203ENST00000466732 CCDC179H3BU77 68 aa2.49□□□□□ -2.01
VPS13D-203ENST00000466732 SIRPB1O00241 398 aa2.49□□□□□ -2.01
VPS13D-203ENST00000466732 GNGT2O14610 69 aa2.49□□□□□ -2.01
VPS13D-203ENST00000466732 RER1O15258 196 aa2.49□□□□□ -2.01
VPS13D-203ENST00000466732 EEF1E1O43324 174 aaKnown RBP2.49□□□□□ -2.01
VPS13D-203ENST00000466732 SYNGR1O43759 233 aa2.49□□□□□ -2.01
VPS13D-203ENST00000466732 DHRS3O75911 302 aa2.49□□□□□ -2.01
VPS13D-203ENST00000466732 DIRAS1O95057 198 aa2.49□□□□□ -2.01
VPS13D-203ENST00000466732 UBL3O95164 117 aa2.49□□□□□ -2.01
VPS13D-203ENST00000466732 ZNF682O95780 498 aa2.49□□□□□ -2.01
VPS13D-203ENST00000466732 HRASP01112 189 aa2.49□□□□□ -2.01
VPS13D-203ENST00000466732 KRASP01116 189 aa2.49□□□□□ -2.01
VPS13D-203ENST00000466732 P04436 131 aa2.49□□□□□ -2.01
VPS13D-203ENST00000466732 PFN1P07737 140 aaKnown RBP2.49□□□□□ -2.01
VPS13D-203ENST00000466732 SEC11BP0C7V7 166 aa2.49□□□□□ -2.01
VPS13D-203ENST00000466732 RPS4Y1P22090 263 aaKnown RBP2.49□□□□□ -2.01
VPS13D-203ENST00000466732 BLVRBP30043 206 aaPredicted RBP2.49□□□□□ -2.01
VPS13D-203ENST00000466732 PRDX3P30048 256 aaKnown RBP2.49□□□□□ -2.01
VPS13D-203ENST00000466732 ZNF93P35789 620 aaPredicted RBP2.49□□□□□ -2.01
VPS13D-203ENST00000466732 SRP14P37108 136 aaKnown RBP2.49□□□□□ -2.01
VPS13D-203ENST00000466732 OR1E2P47887 323 aa2.49□□□□□ -2.01
VPS13D-203ENST00000466732 GZMMP51124 257 aa2.49□□□□□ -2.01
VPS13D-203ENST00000466732 C1QTNF8P60827 252 aa2.49□□□□□ -2.01
VPS13D-203ENST00000466732 GNG5P63218 68 aa2.49□□□□□ -2.01
VPS13D-203ENST00000466732 MEF2CQ06413 473 aaPredicted RBP2.49□□□□□ -2.01
VPS13D-203ENST00000466732 FMODQ06828 376 aa2.49□□□□□ -2.01
VPS13D-203ENST00000466732 RAB40BQ12829 278 aa2.49□□□□□ -2.01
VPS13D-203ENST00000466732 KLRB1Q12918 225 aa2.49□□□□□ -2.01
VPS13D-203ENST00000466732 CATR1Q13166 79 aa2.49□□□□□ -2.01
VPS13D-203ENST00000466732 KLRD1Q13241 179 aa2.49□□□□□ -2.01
VPS13D-203ENST00000466732 ADIRFQ15847 76 aa2.49□□□□□ -2.01
VPS13D-203ENST00000466732 CCL15Q16663 113 aa2.49□□□□□ -2.01
VPS13D-203ENST00000466732 HLA-DRB5Q30154 266 aa2.49□□□□□ -2.01
VPS13D-203ENST00000466732 ACSF3Q4G176 576 aaPredicted RBP2.49□□□□□ -2.01
VPS13D-203ENST00000466732 UBE2NLQ5JXB2 153 aa2.49□□□□□ -2.01
VPS13D-203ENST00000466732 ZNF684Q5T5D7 378 aa2.49□□□□□ -2.01
VPS13D-203ENST00000466732 C1orf195Q5TG92 126 aa2.49□□□□□ -2.01
VPS13D-203ENST00000466732 COMMD6Q7Z4G1 85 aa2.49□□□□□ -2.01
VPS13D-203ENST00000466732 MKXQ8IYA7 352 aa2.49□□□□□ -2.01
VPS13D-203ENST00000466732 TMEM86BQ8N661 226 aa2.49□□□□□ -2.01
VPS13D-203ENST00000466732 TEX29Q8N6K0 151 aa2.49□□□□□ -2.01
VPS13D-203ENST00000466732 ZNF433Q8N7K0 673 aaPredicted RBP2.49□□□□□ -2.01
VPS13D-203ENST00000466732 MDS2Q8NDY4 140 aa2.49□□□□□ -2.01
VPS13D-203ENST00000466732 OR2K2Q8NGT1 345 aa2.49□□□□□ -2.01
VPS13D-203ENST00000466732 OR6K6Q8NGW6 343 aa2.49□□□□□ -2.01
VPS13D-203ENST00000466732 OR4A5Q8NH83 315 aa2.49□□□□□ -2.01
VPS13D-203ENST00000466732 OR51E1Q8TCB6 317 aa2.49□□□□□ -2.01
VPS13D-203ENST00000466732 TWIST2Q8WVJ9 160 aa2.49□□□□□ -2.01
VPS13D-203ENST00000466732 DNAJC19Q96DA6 116 aa2.49□□□□□ -2.01
VPS13D-203ENST00000466732 LINC00477Q96M19 166 aa2.49□□□□□ -2.01
VPS13D-203ENST00000466732 OR4C12Q96R67 309 aa2.49□□□□□ -2.01
VPS13D-203ENST00000466732 HSD17B10Q99714 261 aaKnown RBP2.49□□□□□ -2.01
VPS13D-203ENST00000466732 SPIN2AQ99865 258 aa2.49□□□□□ -2.01
VPS13D-203ENST00000466732 RASL11BQ9BPW5 248 aa2.49□□□□□ -2.01
VPS13D-203ENST00000466732 SPIN2BQ9BPZ2 258 aa2.49□□□□□ -2.01
VPS13D-203ENST00000466732 TBL1YQ9BQ87 522 aa2.49□□□□□ -2.01
VPS13D-203ENST00000466732 SLC25A21Q9BQT8 299 aaPredicted RBP2.49□□□□□ -2.01
VPS13D-203ENST00000466732 NIPSNAP3BQ9BS92 247 aa2.49□□□□□ -2.01
VPS13D-203ENST00000466732 GGTLC1Q9BX51 225 aa2.49□□□□□ -2.01
VPS13D-203ENST00000466732 SLC17A9Q9BYT1 436 aa2.49□□□□□ -2.01
VPS13D-203ENST00000466732 OR2H1Q9GZK4 316 aa2.49□□□□□ -2.01
VPS13D-203ENST00000466732 MS4A6AQ9H2W1 248 aa2.49□□□□□ -2.01
VPS13D-203ENST00000466732 ST20Q9HBF5 79 aa2.49□□□□□ -2.01
VPS13D-203ENST00000466732 RPRMQ9NS64 109 aa2.49□□□□□ -2.01
VPS13D-203ENST00000466732 EHFQ9NZC4 300 aa2.49□□□□□ -2.01
VPS13D-203ENST00000466732 COMMD9Q9P000 198 aa2.49□□□□□ -2.01
VPS13D-203ENST00000466732 PRNDQ9UKY0 176 aa2.49□□□□□ -2.01
VPS13D-203ENST00000466732 FZR1Q9UM11 496 aa2.49□□□□□ -2.01
VPS13D-203ENST00000466732 TP53TG1Q9Y2A0 90 aa2.49□□□□□ -2.01
VPS13D-203ENST00000466732 IER3IP1Q9Y5U9 82 aa2.49□□□□□ -2.01
VPS13D-203ENST00000466732 ALS2Q96Q42 1657 aa2.49□□□□□ -2.01
VPS13D-203ENST00000466732 PLXNA4Q9HCM2 1894 aa2.49□□□□□ -2.01
VPS13D-203ENST00000466732 ANKRD12Q6UB98 2062 aa2.49□□□□□ -2.01
VPS13D-203ENST00000466732 MAST2Q6P0Q8 1798 aa2.49□□□□□ -2.01
VPS13D-203ENST00000466732 DUOX1Q9NRD9 1551 aa2.49□□□□□ -2.01
VPS13D-203ENST00000466732 NYNRINQ9P2P1 1898 aaKnown RBP2.48□□□□□ -2.01
VPS13D-203ENST00000466732 TCRBV9S1A1TA0A576 114 aa2.48□□□□□ -2.01
VPS13D-203ENST00000466732 TLCD2A6NGC4 264 aa2.48□□□□□ -2.01
VPS13D-203ENST00000466732 H3BRM9 83 aa2.48□□□□□ -2.01
VPS13D-203ENST00000466732 GABARAPH6UMI1 98 aa2.48□□□□□ -2.01
VPS13D-203ENST00000466732 TAAR5O14804 337 aa2.48□□□□□ -2.01
VPS13D-203ENST00000466732 TBL1XO60907 577 aa2.48□□□□□ -2.01
VPS13D-203ENST00000466732 NPIPB7O75200 414 aa2.48□□□□□ -2.01
VPS13D-203ENST00000466732 PPIBP23284 216 aaKnown RBP2.48□□□□□ -2.01
VPS13D-203ENST00000466732 MARCKSL1P49006 195 aa2.48□□□□□ -2.01
VPS13D-203ENST00000466732 POLR2JP52435 117 aaKnown RBP2.48□□□□□ -2.01
VPS13D-203ENST00000466732 OSTNP61366 133 aa2.48□□□□□ -2.01
VPS13D-203ENST00000466732 SEC11AP67812 179 aa2.48□□□□□ -2.01
VPS13D-203ENST00000466732 MRPS6P82932 125 aaKnown RBP2.48□□□□□ -2.01
VPS13D-203ENST00000466732 ZNF92Q03936 586 aa2.48□□□□□ -2.01
VPS13D-203ENST00000466732 C1DQ13901 141 aaKnown RBP2.48□□□□□ -2.01
VPS13D-203ENST00000466732 FAM53BQ14153 422 aa2.48□□□□□ -2.01
VPS13D-203ENST00000466732 MEIG1Q5JSS6 88 aa2.48□□□□□ -2.01
VPS13D-203ENST00000466732 BVES-AS1Q5T3Y7 98 aa2.48□□□□□ -2.01
VPS13D-203ENST00000466732 SFXN4Q6P4A7 337 aa2.48□□□□□ -2.01
VPS13D-203ENST00000466732 Q6Q795 121 aa2.48□□□□□ -2.01
VPS13D-203ENST00000466732 RASL11AQ6T310 242 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms