RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 C6orf62Q9GZU0 229 aaPredicted RBP14.15□□□□□ -0.14
COL9A3-206ENST00000466532 TRAV14DV4A0A0A6YYC5 116 aa14.14□□□□□ -0.15
COL9A3-206ENST00000466532 M0QYG6 137 aa14.14□□□□□ -0.15
COL9A3-206ENST00000466532 ERHP84090 104 aaKnown RBP14.14□□□□□ -0.15
COL9A3-206ENST00000466532 ZNF124Q15973 351 aa14.14□□□□□ -0.15
COL9A3-206ENST00000466532 CEMP1Q6PRD7 247 aaPredicted RBP14.14□□□□□ -0.15
COL9A3-206ENST00000466532 IGHV3OR16-13A0A075B7E8 117 aa14.13□□□□□ -0.15
COL9A3-206ENST00000466532 IGHV3-74A0A0B4J1X5 117 aa14.13□□□□□ -0.15
COL9A3-206ENST00000466532 ATF4P18848 351 aaPredicted RBP14.13□□□□□ -0.15
COL9A3-206ENST00000466532 CMC4P56277 68 aaPredicted RBP14.13□□□□□ -0.15
COL9A3-206ENST00000466532 IZUMO4Q1ZYL8 232 aa14.13□□□□□ -0.15
COL9A3-206ENST00000466532 SPINK9Q5DT21 86 aa14.13□□□□□ -0.15
COL9A3-206ENST00000466532 RNASE12Q5GAN4 147 aaKnown RBP14.13□□□□□ -0.15
COL9A3-206ENST00000466532 TMEM217Q8N7C4 229 aa14.13□□□□□ -0.15
COL9A3-206ENST00000466532 PGAM2P15259 253 aa14.12□□□□□ -0.15
COL9A3-206ENST00000466532 PI3P19957 117 aa14.12□□□□□ -0.15
COL9A3-206ENST00000466532 RND3P61587 244 aa14.12□□□□□ -0.15
COL9A3-206ENST00000466532 GBGT1Q8N5D6 347 aa14.12□□□□□ -0.15
COL9A3-206ENST00000466532 ZNF486Q96H40 463 aaPredicted RBP14.12□□□□□ -0.15
COL9A3-206ENST00000466532 GINS3Q9BRX5 216 aa14.12□□□□□ -0.15
COL9A3-206ENST00000466532 FAM25AB3EWG3 89 aa14.11□□□□□ -0.15
COL9A3-206ENST00000466532 FAM25CB3EWG5 89 aa14.11□□□□□ -0.15
COL9A3-206ENST00000466532 FAM25GB3EWG6 89 aa14.11□□□□□ -0.15
COL9A3-206ENST00000466532 RORCP51449 518 aa14.11□□□□□ -0.15
COL9A3-206ENST00000466532 FAM90A2PQ658T7 463 aa14.11□□□□□ -0.15
COL9A3-206ENST00000466532 TCF24Q7RTU0 167 aa14.11□□□□□ -0.15
COL9A3-206ENST00000466532 DUSP18Q8NEJ0 188 aa14.11□□□□□ -0.15
COL9A3-206ENST00000466532 CSTL1Q9H114 145 aa14.11□□□□□ -0.15
COL9A3-206ENST00000466532 KLK5Q9Y337 293 aaPredicted RBP14.11□□□□□ -0.15
COL9A3-206ENST00000466532 MPTX1A8MV57 137 aa14.1□□□□□ -0.15
COL9A3-206ENST00000466532 IGKV1-5P01602 117 aa14.1□□□□□ -0.15
COL9A3-206ENST00000466532 SNCAP37840 140 aa14.1□□□□□ -0.15
COL9A3-206ENST00000466532 NPBWR1P48145 328 aa14.1□□□□□ -0.15
COL9A3-206ENST00000466532 AKR1C2P52895 323 aa14.1□□□□□ -0.15
COL9A3-206ENST00000466532 PIGPP57054 158 aa14.1□□□□□ -0.15
COL9A3-206ENST00000466532 PAFAH1B2P68402 229 aa14.1□□□□□ -0.15
COL9A3-206ENST00000466532 RNASE10Q5GAN6 216 aaKnown RBP14.1□□□□□ -0.15
COL9A3-206ENST00000466532 MZT2AQ6P582 158 aa14.1□□□□□ -0.15
COL9A3-206ENST00000466532 TOMM20LQ6UXN7 152 aa14.1□□□□□ -0.15
COL9A3-206ENST00000466532 LHFPL1Q86WI0 220 aa14.1□□□□□ -0.15
COL9A3-206ENST00000466532 SLC35G3Q8N808 338 aa14.1□□□□□ -0.15
COL9A3-206ENST00000466532 TP53RKQ96S44 253 aa14.1□□□□□ -0.15
COL9A3-206ENST00000466532 KLK11Q9UBX7 282 aa14.1□□□□□ -0.15
COL9A3-206ENST00000466532 ST8SIA2Q92186 375 aa14.09□□□□□ -0.15
COL9A3-206ENST00000466532 PDCD10Q9BUL8 212 aa14.09□□□□□ -0.15
COL9A3-206ENST00000466532 A0A0B4J293 547 aa14.08□□□□□ -0.16
COL9A3-206ENST00000466532 C3orf85A0A1B0GTC6 90 aa14.08□□□□□ -0.16
COL9A3-206ENST00000466532 ST8SIA3O43173 380 aa14.08□□□□□ -0.16
COL9A3-206ENST00000466532 ATG12O94817 140 aa14.08□□□□□ -0.16
COL9A3-206ENST00000466532 IFNA17P01571 189 aa14.08□□□□□ -0.16
COL9A3-206ENST00000466532 APOHP02749 345 aaPredicted RBP14.08□□□□□ -0.16
COL9A3-206ENST00000466532 CD3DP04234 171 aa14.08□□□□□ -0.16
COL9A3-206ENST00000466532 CD5P06127 495 aa14.08□□□□□ -0.16
COL9A3-206ENST00000466532 P0C879 139 aa14.08□□□□□ -0.16
COL9A3-206ENST00000466532 PPP5CP53041 499 aa14.08□□□□□ -0.16
COL9A3-206ENST00000466532 ZNF600Q6ZNG1 722 aa14.08□□□□□ -0.16
COL9A3-206ENST00000466532 ARRDC1Q8N5I2 433 aa14.08□□□□□ -0.16
COL9A3-206ENST00000466532 OR52I2Q8NH67 350 aa14.08□□□□□ -0.16
COL9A3-206ENST00000466532 GATAD1Q8WUU5 269 aa14.08□□□□□ -0.16
COL9A3-206ENST00000466532 VSIRQ9H7M9 311 aa14.08□□□□□ -0.16
COL9A3-206ENST00000466532 ZFAND3Q9H8U3 227 aa14.08□□□□□ -0.16
COL9A3-206ENST00000466532 PUS1Q9Y606 427 aaKnown RBP eCLIP14.08□□□□□ -0.16
COL9A3-206ENST00000466532 AGRNO00468 2067 aa14.08□□□□□ -0.16
COL9A3-206ENST00000466532 IGHV3-66A0A0C4DH42 116 aa14.07□□□□□ -0.16
COL9A3-206ENST00000466532 INS-IGF2F8WCM5 200 aa14.07□□□□□ -0.16
COL9A3-206ENST00000466532 TRIM16LQ309B1 348 aa14.07□□□□□ -0.16
COL9A3-206ENST00000466532 LILRB2Q8N423 598 aa14.07□□□□□ -0.16
COL9A3-206ENST00000466532 PHLDA1Q8WV24 401 aaPredicted RBP14.07□□□□□ -0.16
COL9A3-206ENST00000466532 AP3S1Q92572 193 aa14.07□□□□□ -0.16
COL9A3-206ENST00000466532 RARRES2Q99969 163 aa14.07□□□□□ -0.16
COL9A3-206ENST00000466532 COPZ2Q9P299 210 aa14.07□□□□□ -0.16
COL9A3-206ENST00000466532 EXTL2Q9UBQ6 330 aa14.07□□□□□ -0.16
COL9A3-206ENST00000466532 DNASE2O00115 360 aaPredicted RBP14.06□□□□□ -0.16
COL9A3-206ENST00000466532 CORTO00230 105 aa14.06□□□□□ -0.16
COL9A3-206ENST00000466532 DFFBO76075 338 aa14.06□□□□□ -0.16
COL9A3-206ENST00000466532 TMEM50AO95807 157 aa14.06□□□□□ -0.16
COL9A3-206ENST00000466532 RNASE2P10153 161 aaKnown RBP14.06□□□□□ -0.16
COL9A3-206ENST00000466532 TBPP20226 339 aa14.06□□□□□ -0.16
COL9A3-206ENST00000466532 ETV6P41212 452 aa14.06□□□□□ -0.16
COL9A3-206ENST00000466532 HOXA1P49639 335 aaPredicted RBP14.06□□□□□ -0.16
COL9A3-206ENST00000466532 SUB1P53999 127 aaKnown RBP eCLIP14.06□□□□□ -0.16
COL9A3-206ENST00000466532 RPL11P62913 178 aaKnown RBP14.06□□□□□ -0.16
COL9A3-206ENST00000466532 CCDC71LQ8N9Z2 235 aa14.06□□□□□ -0.16
COL9A3-206ENST00000466532 MS4A6AQ9H2W1 248 aa14.06□□□□□ -0.16
COL9A3-206ENST00000466532 MTFP1Q9UDX5 166 aa14.06□□□□□ -0.16
COL9A3-206ENST00000466532 KMT2AQ03164 3969 aa14.06□□□□□ -0.16
COL9A3-206ENST00000466532 A0A1B0GU03 582 aa14.05□□□□□ -0.16
COL9A3-206ENST00000466532 SP6Q3SY56 376 aa14.05□□□□□ -0.16
COL9A3-206ENST00000466532 PVRIGQ6DKI7 326 aa14.05□□□□□ -0.16
COL9A3-206ENST00000466532 OR4D10Q8NGI6 311 aa14.05□□□□□ -0.16
COL9A3-206ENST00000466532 OR11H2Q8NH07 326 aa14.05□□□□□ -0.16
COL9A3-206ENST00000466532 ZFAND1Q8TCF1 268 aa14.05□□□□□ -0.16
COL9A3-206ENST00000466532 NAA50Q9GZZ1 169 aaKnown RBP14.05□□□□□ -0.16
COL9A3-206ENST00000466532 TMEM231Q9H6L2 316 aa14.05□□□□□ -0.16
COL9A3-206ENST00000466532 ENY2Q9NPA8 101 aa14.05□□□□□ -0.16
COL9A3-206ENST00000466532 FRAS1Q86XX4 4008 aa14.05□□□□□ -0.16
COL9A3-206ENST00000466532 CA1P00915 261 aaPredicted RBP14.04□□□□□ -0.16
COL9A3-206ENST00000466532 ZNF182P17025 639 aaPredicted RBP14.04□□□□□ -0.16
COL9A3-206ENST00000466532 DEFB131AP59861 70 aa14.04□□□□□ -0.16
COL9A3-206ENST00000466532 SCGB2B2Q4G0G5 96 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms