RNA–Protein interactions for RNA: ENST00000465655.2

RPL39P28-201, Transcript of ribosomal protein L39 pseudogene 28, humanhuman

BASIC

Gene RPL39P28, Length 155 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P28-201ENST00000465655 CPSF4LA6NMK7 179 aaKnown RBP0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 C15orf61A6NNL5 157 aa0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 IGLL5B9A064 214 aa0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 HAX1O00165 279 aa0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 PRRG2O14669 202 aa0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 RRHO14718 337 aa0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 UQCRQO14949 82 aa0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 CRXO43186 299 aaPredicted RBP0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 PAX4O43316 350 aa0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 SSSCA1O60232 199 aa0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 DUSP14O95147 198 aaKnown RBP0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 NDUFB4O95168 129 aa0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 LEPROTL1O95214 131 aa0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 C1orf105O95561 183 aa0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 NTN1O95631 604 aa0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 PLAUP00749 431 aa0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 TNFP01375 233 aa0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 IGKV1D-16P01601 117 aa0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 IGKCP01834 107 aa0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 IGHG3P01860 377 aa0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 IGHMP01871 453 aa0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 APCSP02743 223 aa0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 IL4P05112 153 aa0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 LGALS1P09382 135 aaKnown RBP0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 HOXB7P09629 217 aa0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 OR5AL1P0C617 328 aa0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 OR9G9P0C7N8 305 aa0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 ASAH2BP0C7U1 165 aa0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 SCGB1C2P0DMR2 95 aa0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 PYYP10082 97 aa0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 PRB4P10163 310 aaPredicted RBP0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 COX8AP10176 69 aa0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 COX6A1P12074 109 aa0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 HLA-DOBP13765 273 aa0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 LIFP15018 202 aa0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 COX7CP15954 63 aa0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 IGFBP3P17936 291 aaPredicted RBP0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 SRD5A1P18405 259 aa0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 FSTP19883 344 aa0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 FKBP2P26885 142 aaKnown RBP0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 HOXD3P31249 432 aaPredicted RBP0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 CDAP32320 146 aa0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 SFTPDP35247 375 aa0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 SAA4P35542 130 aa0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 ASIPP42127 132 aa0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 SPINT3P49223 89 aa0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 SGSHP51688 502 aa0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 DYNLT3P51808 116 aa0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 UBE2E1P51965 193 aa0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 EFNB2P52799 333 aa0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 SUB1P53999 127 aaKnown RBP eCLIP0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 FXYD2P54710 66 aa0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 FOXA3P55318 350 aaPredicted RBP0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 CLDN17P56750 224 aa0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 LINC00310P59036 64 aa0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 YPEL3P61236 119 aaPredicted RBP0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 DAD1P61803 113 aa0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 NPC2P61916 151 aa0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 WDR5P61964 334 aaKnown RBP0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 SNRPD3P62318 126 aaKnown RBP0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 FKBP1AP62942 108 aaKnown RBP0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 HBG2P69892 147 aa0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 RBM3P98179 157 aaKnown RBP0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 PLGLB1Q02325 96 aa0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 SP4Q02446 784 aa0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 PRDX1Q06830 199 aaKnown RBP0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 LOXL1Q08397 574 aaPredicted RBP0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 ARL16Q0P5N6 197 aa0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 Q0VG73 95 aa0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 EFEMP1Q12805 493 aa0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 FOXF2Q12947 444 aa0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 DAZ2Q13117 558 aaKnown RBP0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 ARFRP1Q13795 201 aa0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 KLF5Q13887 457 aaPredicted RBP0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 CIRBPQ14011 172 aaKnown RBP0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 TMEM187Q14656 261 aa0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 IGFBP7Q16270 282 aa0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 CSRP2Q16527 193 aa0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 RTL8BQ17RB0 113 aa0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 ECSCRQ19T08 205 aa0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 Q1RN00 199 aa0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 RRN3P1Q2M238 152 aa0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 NSUN5P1Q3KNT7 163 aa0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 ABCA11PQ4W5N1 156 aa0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 ORMDL2Q53FV1 153 aa0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 SYT14P1Q58G82 188 aa0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 SPRNQ5BIV9 151 aa0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 SPANXN4Q5MJ08 99 aa0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 SLC25A30Q5SVS4 291 aa0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 FAM201AQ5SY85 155 aa0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 MRPL2Q5T653 305 aaKnown RBP0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 PLPP4Q5VZY2 271 aa0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 MIC13Q5XKP0 118 aa0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 C12orf73Q69YU5 71 aa0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 TMEM200BQ69YZ2 307 aa0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 DMKNQ6E0U4 476 aaPredicted RBP0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 MORN3Q6PF18 240 aaPredicted RBP0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 PCSK4Q6UW60 755 aa0.74□□□□□ -2.29
RPL39P28-201ENST00000465655 IGFL2Q6UWQ7 119 aa0.74□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms