RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 F8W735 103 aaPredicted RBP15.55■□□□□ 0.08
SKA3-205ENST00000465471 I3L2K1 104 aa15.55■□□□□ 0.08
SKA3-205ENST00000465471 TNFRSF9Q07011 255 aa15.55■□□□□ 0.08
SKA3-205ENST00000465471 RPEL1Q2QD12 228 aa15.55■□□□□ 0.08
SKA3-205ENST00000465471 CLEC19AQ6UXS0 136 aa15.55■□□□□ 0.08
SKA3-205ENST00000465471 COQ8AQ8NI60 647 aa15.55■□□□□ 0.08
SKA3-205ENST00000465471 SCARB1Q8WTV0 552 aa15.55■□□□□ 0.08
SKA3-205ENST00000465471 ENY2Q9NPA8 101 aa15.55■□□□□ 0.08
SKA3-205ENST00000465471 TRAV6A0A075B6T7 132 aa15.54■□□□□ 0.08
SKA3-205ENST00000465471 ARL3P36405 182 aa15.54■□□□□ 0.08
SKA3-205ENST00000465471 SNCAP37840 140 aa15.54■□□□□ 0.08
SKA3-205ENST00000465471 GGNBP1Q5YKI7 109 aa15.54■□□□□ 0.08
SKA3-205ENST00000465471 MITD1Q8WV92 249 aa15.54■□□□□ 0.08
SKA3-205ENST00000465471 GGCTO75223 188 aaKnown RBP15.53■□□□□ 0.08
SKA3-205ENST00000465471 CLEC3BP05452 202 aa15.53■□□□□ 0.08
SKA3-205ENST00000465471 HOXB5P09067 269 aa15.53■□□□□ 0.08
SKA3-205ENST00000465471 H2AFB2P0C5Z0 115 aa15.53■□□□□ 0.08
SKA3-205ENST00000465471 FCGR2BP31994 310 aaPredicted RBP15.53■□□□□ 0.08
SKA3-205ENST00000465471 INSL3P51460 131 aa15.53■□□□□ 0.08
SKA3-205ENST00000465471 SYNJ2BPP57105 145 aa15.53■□□□□ 0.08
SKA3-205ENST00000465471 DEFA6Q01524 100 aa15.53■□□□□ 0.08
SKA3-205ENST00000465471 OR52B4Q8NGK2 314 aa15.53■□□□□ 0.08
SKA3-205ENST00000465471 C21orf62Q9NYP8 219 aa15.53■□□□□ 0.08
SKA3-205ENST00000465471 CEBPZOSA8MTT3 80 aa15.52■□□□□ 0.08
SKA3-205ENST00000465471 FAM90A26D6RGX4 464 aa15.52■□□□□ 0.08
SKA3-205ENST00000465471 ADAP1O75689 374 aa15.52■□□□□ 0.08
SKA3-205ENST00000465471 NXPH3O95157 252 aa15.52■□□□□ 0.08
SKA3-205ENST00000465471 GPR183P32249 361 aa15.52■□□□□ 0.08
SKA3-205ENST00000465471 SUB1P53999 127 aaKnown RBP eCLIP15.52■□□□□ 0.08
SKA3-205ENST00000465471 KRTAP10-11P60412 298 aa15.52■□□□□ 0.08
SKA3-205ENST00000465471 C11orf87Q6NUJ2 197 aa15.52■□□□□ 0.08
SKA3-205ENST00000465471 IL34Q6ZMJ4 242 aa15.52■□□□□ 0.08
SKA3-205ENST00000465471 GPHB5Q86YW7 130 aa15.52■□□□□ 0.08
SKA3-205ENST00000465471 DUSP18Q8NEJ0 188 aa15.52■□□□□ 0.08
SKA3-205ENST00000465471 OR9G4Q8NGQ1 327 aa15.52■□□□□ 0.08
SKA3-205ENST00000465471 OR1S1Q8NH92 325 aa15.52■□□□□ 0.08
SKA3-205ENST00000465471 MISP3Q96FF7 219 aa15.52■□□□□ 0.08
SKA3-205ENST00000465471 RBKSQ9H477 322 aa15.52■□□□□ 0.08
SKA3-205ENST00000465471 HEYLQ9NQ87 328 aaPredicted RBP15.52■□□□□ 0.08
SKA3-205ENST00000465471 IGHV3-21A0A0B4J1V1 117 aa15.51■□□□□ 0.07
SKA3-205ENST00000465471 TGOLN2O43493 480 aa15.51■□□□□ 0.07
SKA3-205ENST00000465471 MT-CO2P00403 227 aa15.51■□□□□ 0.07
SKA3-205ENST00000465471 HTR2BP41595 481 aa15.51■□□□□ 0.07
SKA3-205ENST00000465471 C2orf83Q53S99 150 aa15.51■□□□□ 0.07
SKA3-205ENST00000465471 ENKURQ8TC29 256 aa15.51■□□□□ 0.07
SKA3-205ENST00000465471 TMEM170AQ8WVE7 144 aa15.51■□□□□ 0.07
SKA3-205ENST00000465471 BSCL2Q96G97 398 aaPredicted RBP15.51■□□□□ 0.07
SKA3-205ENST00000465471 MPTX1A8MV57 137 aa15.5■□□□□ 0.07
SKA3-205ENST00000465471 LGALS9O00182 355 aa15.5■□□□□ 0.07
SKA3-205ENST00000465471 CORTO00230 105 aa15.5■□□□□ 0.07
SKA3-205ENST00000465471 OR2C1O95371 312 aa15.5■□□□□ 0.07
SKA3-205ENST00000465471 REC114Q7Z4M0 266 aa15.5■□□□□ 0.07
SKA3-205ENST00000465471 NRARPQ7Z6K4 114 aa15.5■□□□□ 0.07
SKA3-205ENST00000465471 SLC24A4Q8NFF2 622 aa15.5■□□□□ 0.07
SKA3-205ENST00000465471 DTD1Q8TEA8 209 aa15.5■□□□□ 0.07
SKA3-205ENST00000465471 ZNF431Q8TF32 576 aaPredicted RBP15.5■□□□□ 0.07
SKA3-205ENST00000465471 SEC22CQ9BRL7 303 aa15.5■□□□□ 0.07
SKA3-205ENST00000465471 SIGLEC8Q9NYZ4 499 aa15.5■□□□□ 0.07
SKA3-205ENST00000465471 PRKDCP78527 4128 aaKnown RBP15.49■□□□□ 0.07
SKA3-205ENST00000465471 OR2T8A6NH00 312 aa15.49■□□□□ 0.07
SKA3-205ENST00000465471 SAP30O75446 220 aa15.49■□□□□ 0.07
SKA3-205ENST00000465471 TATDN3Q17R31 274 aa15.49■□□□□ 0.07
SKA3-205ENST00000465471 SPSB3Q6PJ21 355 aa15.49■□□□□ 0.07
SKA3-205ENST00000465471 ZNF414Q96IQ9 312 aa15.49■□□□□ 0.07
SKA3-205ENST00000465471 TXN2Q99757 166 aa15.49■□□□□ 0.07
SKA3-205ENST00000465471 ELOVL1Q9BW60 279 aa15.49■□□□□ 0.07
SKA3-205ENST00000465471 ZNF436Q9C0F3 470 aaPredicted RBP15.49■□□□□ 0.07
SKA3-205ENST00000465471 HIPK2Q9H2X6 1198 aa15.49■□□□□ 0.07
SKA3-205ENST00000465471 FNDC4Q9H6D8 234 aaPredicted RBP15.49■□□□□ 0.07
SKA3-205ENST00000465471 IL5P05113 134 aa15.48■□□□□ 0.07
SKA3-205ENST00000465471 CSN3P07498 182 aa15.48■□□□□ 0.07
SKA3-205ENST00000465471 ADMP35318 185 aa15.48■□□□□ 0.07
SKA3-205ENST00000465471 DEFA1P59665 94 aa15.48■□□□□ 0.07
SKA3-205ENST00000465471 DEFA3P59666 94 aa15.48■□□□□ 0.07
SKA3-205ENST00000465471 OR4D5Q8NGN0 318 aa15.48■□□□□ 0.07
SKA3-205ENST00000465471 PINX1Q96BK5 328 aaKnown RBP15.48■□□□□ 0.07
SKA3-205ENST00000465471 CHRDL1Q9BU40 450 aa15.48■□□□□ 0.07
SKA3-205ENST00000465471 AURKAIP1Q9NWT8 199 aaPredicted RBP15.48■□□□□ 0.07
SKA3-205ENST00000465471 GAR1Q9NY12 217 aaKnown RBP15.48■□□□□ 0.07
SKA3-205ENST00000465471 A8MWP6 167 aa15.47■□□□□ 0.07
SKA3-205ENST00000465471 IFNA21P01568 189 aa15.47■□□□□ 0.07
SKA3-205ENST00000465471 CTSGP08311 255 aa15.47■□□□□ 0.07
SKA3-205ENST00000465471 NPY1RP25929 384 aa15.47■□□□□ 0.07
SKA3-205ENST00000465471 MFAP4P55083 255 aa15.47■□□□□ 0.07
SKA3-205ENST00000465471 PLET1Q6UQ28 207 aa15.47■□□□□ 0.07
SKA3-205ENST00000465471 ZC4H2Q9NQZ6 224 aa15.47■□□□□ 0.07
SKA3-205ENST00000465471 PEMTQ9UBM1 199 aa15.47■□□□□ 0.07
SKA3-205ENST00000465471 U3KQ87 197 aa15.47■□□□□ 0.07
SKA3-205ENST00000465471 IGLV1-51P01701 117 aa15.46■□□□□ 0.07
SKA3-205ENST00000465471 IGHV3-48P01763 117 aa15.46■□□□□ 0.07
SKA3-205ENST00000465471 PRB2P02812 416 aaPredicted RBP15.46■□□□□ 0.07
SKA3-205ENST00000465471 ID3Q02535 119 aa15.46■□□□□ 0.07
SKA3-205ENST00000465471 Q56UQ5 140 aa15.46■□□□□ 0.07
SKA3-205ENST00000465471 ADAMTSL5Q6ZMM2 481 aa15.46■□□□□ 0.07
SKA3-205ENST00000465471 RNASEH2CQ8TDP1 164 aaKnown RBP15.46■□□□□ 0.07
SKA3-205ENST00000465471 OR10C1Q96KK4 312 aa15.46■□□□□ 0.07
SKA3-205ENST00000465471 OR4C12Q96R67 309 aa15.46■□□□□ 0.07
SKA3-205ENST00000465471 ZMAT5Q9UDW3 170 aaKnown RBP15.46■□□□□ 0.07
SKA3-205ENST00000465471 SYNGR2O43760 224 aa15.45■□□□□ 0.06
SKA3-205ENST00000465471 MED6O75586 246 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms