RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 ACOT6Q3I5F7 207 aaPredicted RBP1.37□□□□□ -2.19
CLK1-208ENST00000464454 FP248Q71RG6 208 aaPredicted RBP1.37□□□□□ -2.19
CLK1-208ENST00000464454 LYG2Q86SG7 212 aa1.37□□□□□ -2.19
CLK1-208ENST00000464454 DHFR2Q86XF0 187 aa1.37□□□□□ -2.19
CLK1-208ENST00000464454 CLDN22Q8N7P3 220 aa1.37□□□□□ -2.19
CLK1-208ENST00000464454 OR8B3Q8NGG8 313 aa1.37□□□□□ -2.19
CLK1-208ENST00000464454 RASSF5Q8WWW0 418 aa1.37□□□□□ -2.19
CLK1-208ENST00000464454 C11orf40Q8WZ69 217 aa1.37□□□□□ -2.19
CLK1-208ENST00000464454 DCUN1D1Q96GG9 259 aa1.37□□□□□ -2.19
CLK1-208ENST00000464454 Q96M85 177 aa1.37□□□□□ -2.19
CLK1-208ENST00000464454 NIPSNAP1Q9BPW8 284 aa1.37□□□□□ -2.19
CLK1-208ENST00000464454 KRTAP4-1Q9BYQ7 146 aa1.37□□□□□ -2.19
CLK1-208ENST00000464454 FBXO5Q9UKT4 447 aa1.37□□□□□ -2.19
CLK1-208ENST00000464454 ARL5AQ9Y689 179 aa1.37□□□□□ -2.19
CLK1-208ENST00000464454 NCOA1Q15788 1441 aa1.37□□□□□ -2.19
CLK1-208ENST00000464454 GLI3P10071 1580 aa1.37□□□□□ -2.19
CLK1-208ENST00000464454 MED13Q9UHV7 2174 aa1.37□□□□□ -2.19
CLK1-208ENST00000464454 KIF24Q5T7B8 1368 aa1.36□□□□□ -2.19
CLK1-208ENST00000464454 PCDH15Q96QU1 1955 aa1.36□□□□□ -2.19
CLK1-208ENST00000464454 A0A087WUJ7 227 aa1.36□□□□□ -2.19
CLK1-208ENST00000464454 PQLC2LA1A4F0 135 aa1.36□□□□□ -2.19
CLK1-208ENST00000464454 IBA57-AS1B1ANH7 110 aa1.36□□□□□ -2.19
CLK1-208ENST00000464454 H3BQV1 296 aa1.36□□□□□ -2.19
CLK1-208ENST00000464454 IGKV1-5P01602 117 aa1.36□□□□□ -2.19
CLK1-208ENST00000464454 CYBAP13498 195 aa1.36□□□□□ -2.19
CLK1-208ENST00000464454 RPL5P46777 297 aaKnown RBP1.36□□□□□ -2.19
CLK1-208ENST00000464454 HBA1P69905 142 aa1.36□□□□□ -2.19
CLK1-208ENST00000464454 WRNQ14191 1432 aaPredicted RBP eCLIP1.36□□□□□ -2.19
CLK1-208ENST00000464454 Q1T7F1 81 aa1.36□□□□□ -2.19
CLK1-208ENST00000464454 TMEM97Q5BJF2 176 aa1.36□□□□□ -2.19
CLK1-208ENST00000464454 SPANXN3Q5MJ09 141 aa1.36□□□□□ -2.19
CLK1-208ENST00000464454 LPCAT3Q6P1A2 487 aa1.36□□□□□ -2.19
CLK1-208ENST00000464454 DHRS4L2Q6PKH6 230 aa1.36□□□□□ -2.19
CLK1-208ENST00000464454 Q6ZSA8 131 aa1.36□□□□□ -2.19
CLK1-208ENST00000464454 STX12Q86Y82 276 aa1.36□□□□□ -2.19
CLK1-208ENST00000464454 ANKRD29Q8N6D5 301 aa1.36□□□□□ -2.19
CLK1-208ENST00000464454 PXT1Q8NFP0 134 aa1.36□□□□□ -2.19
CLK1-208ENST00000464454 OR13C4Q8NGS5 318 aa1.36□□□□□ -2.19
CLK1-208ENST00000464454 PPP1R2P1Q96PQ5 205 aa1.36□□□□□ -2.19
CLK1-208ENST00000464454 HELZ2Q9BYK8 2649 aaKnown RBP1.36□□□□□ -2.19
CLK1-208ENST00000464454 CYSTM1Q9H1C7 97 aa1.36□□□□□ -2.19
CLK1-208ENST00000464454 BOLA2Q9H3K6 86 aa1.36□□□□□ -2.19
CLK1-208ENST00000464454 CENPHQ9H3R5 247 aa1.36□□□□□ -2.19
CLK1-208ENST00000464454 DOCK5Q9H7D0 1870 aa1.36□□□□□ -2.19
CLK1-208ENST00000464454 FBXL12Q9NXK8 326 aa1.36□□□□□ -2.19
CLK1-208ENST00000464454 BAIAP2Q9UQB8 552 aa1.36□□□□□ -2.19
CLK1-208ENST00000464454 PKIGQ9Y2B9 76 aa1.36□□□□□ -2.19
CLK1-208ENST00000464454 NUP155O75694 1391 aa1.35□□□□□ -2.19
CLK1-208ENST00000464454 MTUS2Q5JR59 1369 aa1.35□□□□□ -2.19
CLK1-208ENST00000464454 CCDC88AQ3V6T2 1871 aa1.35□□□□□ -2.19
CLK1-208ENST00000464454 GNG10P50151 68 aa1.35□□□□□ -2.19
CLK1-208ENST00000464454 HIST1H3AP68431 136 aa1.35□□□□□ -2.19
CLK1-208ENST00000464454 H3F3AP84243 136 aa1.35□□□□□ -2.19
CLK1-208ENST00000464454 KCNJ8Q15842 424 aa1.35□□□□□ -2.19
CLK1-208ENST00000464454 IAH1Q2TAA2 248 aaPredicted RBP1.35□□□□□ -2.19
CLK1-208ENST00000464454 OR10X1Q8NGY0 326 aa1.35□□□□□ -2.19
CLK1-208ENST00000464454 AP3S1Q92572 193 aa1.35□□□□□ -2.19
CLK1-208ENST00000464454 SCGB3A1Q96QR1 104 aa1.35□□□□□ -2.19
CLK1-208ENST00000464454 MRPL27Q9P0M9 148 aaKnown RBP1.35□□□□□ -2.19
CLK1-208ENST00000464454 LHFPL6Q9Y693 200 aa1.35□□□□□ -2.19
CLK1-208ENST00000464454 BAZ2BQ9UIF8 2168 aaKnown RBP1.35□□□□□ -2.19
CLK1-208ENST00000464454 RP1L1Q8IWN7 2480 aaPredicted RBP1.34□□□□□ -2.19
CLK1-208ENST00000464454 STRCQ7RTU9 1775 aa1.34□□□□□ -2.19
CLK1-208ENST00000464454 IGKV1D-43A0A0B4J1Z2 117 aa1.34□□□□□ -2.19
CLK1-208ENST00000464454 DPRXA6NFQ7 191 aa1.34□□□□□ -2.19
CLK1-208ENST00000464454 PGRMC1O00264 195 aaKnown RBP1.34□□□□□ -2.19
CLK1-208ENST00000464454 FAAHO00519 579 aa1.34□□□□□ -2.19
CLK1-208ENST00000464454 PMP2P02689 132 aa1.34□□□□□ -2.19
CLK1-208ENST00000464454 TTRP02766 147 aa1.34□□□□□ -2.19
CLK1-208ENST00000464454 KRR1Q13601 381 aaKnown RBP1.34□□□□□ -2.19
CLK1-208ENST00000464454 ZNF345Q14585 488 aa1.34□□□□□ -2.19
CLK1-208ENST00000464454 TAF1AQ15573 450 aaPredicted RBP1.34□□□□□ -2.19
CLK1-208ENST00000464454 AAED1Q7RTV5 226 aa1.34□□□□□ -2.19
CLK1-208ENST00000464454 PHF13Q86YI8 300 aaPredicted RBP1.34□□□□□ -2.19
CLK1-208ENST00000464454 C9orf163Q8N9P6 203 aa1.34□□□□□ -2.19
CLK1-208ENST00000464454 TMEM106AQ96A25 262 aa1.34□□□□□ -2.19
CLK1-208ENST00000464454 TOMM6Q96B49 74 aa1.34□□□□□ -2.19
CLK1-208ENST00000464454 TSPAN32Q96QS1 320 aa1.34□□□□□ -2.19
CLK1-208ENST00000464454 ULBP3Q9BZM4 244 aa1.34□□□□□ -2.19
CLK1-208ENST00000464454 YIPF3Q9GZM5 350 aa1.34□□□□□ -2.19
CLK1-208ENST00000464454 STOML2Q9UJZ1 356 aa1.34□□□□□ -2.19
CLK1-208ENST00000464454 TMEM56-RWDD3S4R434 201 aa1.34□□□□□ -2.19
CLK1-208ENST00000464454 TOPBP1Q92547 1522 aa1.34□□□□□ -2.2
CLK1-208ENST00000464454 PCF11O94913 1555 aaKnown RBP1.34□□□□□ -2.2
CLK1-208ENST00000464454 ROCK1Q13464 1354 aa1.34□□□□□ -2.2
CLK1-208ENST00000464454 TONSLQ96HA7 1378 aa1.34□□□□□ -2.2
CLK1-208ENST00000464454 CCDC144AA2RUR9 1427 aa1.33□□□□□ -2.2
CLK1-208ENST00000464454 ZCCHC6Q5VYS8 1495 aaKnown RBP1.33□□□□□ -2.2
CLK1-208ENST00000464454 EXOC1LA0A1B0GW35 172 aa1.33□□□□□ -2.2
CLK1-208ENST00000464454 CRYZL1O95825 349 aa1.33□□□□□ -2.2
CLK1-208ENST00000464454 SERPINA1P01009 418 aa1.33□□□□□ -2.2
CLK1-208ENST00000464454 IFNA10P01566 189 aa1.33□□□□□ -2.2
CLK1-208ENST00000464454 ANGP03950 147 aaKnown RBP1.33□□□□□ -2.2
CLK1-208ENST00000464454 CLPSP04118 112 aa1.33□□□□□ -2.2
CLK1-208ENST00000464454 FABP1P07148 127 aa1.33□□□□□ -2.2
CLK1-208ENST00000464454 ARL14EPLP0DKL9 152 aa1.33□□□□□ -2.2
CLK1-208ENST00000464454 ALX1Q15699 326 aa1.33□□□□□ -2.2
CLK1-208ENST00000464454 KISS1Q15726 138 aa1.33□□□□□ -2.2
CLK1-208ENST00000464454 SNCBQ16143 134 aa1.33□□□□□ -2.2
CLK1-208ENST00000464454 OR6V1Q8N148 313 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms