RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 CD7P09564 240 aa9.76□□□□□ -0.85
XRN1-203ENST00000463916 ERHP84090 104 aaKnown RBP9.76□□□□□ -0.85
XRN1-203ENST00000463916 TMEM268Q5VZI3 342 aa9.76□□□□□ -0.85
XRN1-203ENST00000463916 TMEM61Q8N0U2 210 aa9.76□□□□□ -0.85
XRN1-203ENST00000463916 GPR146Q96CH1 333 aa9.76□□□□□ -0.85
XRN1-203ENST00000463916 TMEM56-RWDD3S4R434 201 aa9.76□□□□□ -0.85
XRN1-203ENST00000463916 A8MZ25 164 aa9.76□□□□□ -0.85
XRN1-203ENST00000463916 INS-IGF2F8WCM5 200 aa9.76□□□□□ -0.85
XRN1-203ENST00000463916 C8orf88P0DMB2 117 aa9.76□□□□□ -0.85
XRN1-203ENST00000463916 TMEM187Q14656 261 aa9.76□□□□□ -0.85
XRN1-203ENST00000463916 AARDQ4LEZ3 155 aa9.76□□□□□ -0.85
XRN1-203ENST00000463916 Q56UQ5 140 aa9.76□□□□□ -0.85
XRN1-203ENST00000463916 TOMM5Q8N4H5 51 aa9.76□□□□□ -0.85
XRN1-203ENST00000463916 SLC35G3Q8N808 338 aa9.76□□□□□ -0.85
XRN1-203ENST00000463916 RNASE11Q8TAA1 199 aaKnown RBP9.76□□□□□ -0.85
XRN1-203ENST00000463916 PINX1Q96BK5 328 aaKnown RBP9.76□□□□□ -0.85
XRN1-203ENST00000463916 TECRQ9NZ01 308 aaKnown RBP9.76□□□□□ -0.85
XRN1-203ENST00000463916 AKR1C4P17516 323 aa9.75□□□□□ -0.85
XRN1-203ENST00000463916 DHODHQ02127 395 aa9.75□□□□□ -0.85
XRN1-203ENST00000463916 GUCA2BQ16661 112 aa9.75□□□□□ -0.85
XRN1-203ENST00000463916 PVRIGQ6DKI7 326 aa9.75□□□□□ -0.85
XRN1-203ENST00000463916 SPSB3Q6PJ21 355 aa9.75□□□□□ -0.85
XRN1-203ENST00000463916 BTNL8Q6UX41 500 aa9.75□□□□□ -0.85
XRN1-203ENST00000463916 GTSCR1Q86UQ5 136 aa9.75□□□□□ -0.85
XRN1-203ENST00000463916 SGPP2Q8IWX5 399 aa9.75□□□□□ -0.85
XRN1-203ENST00000463916 TMEM190Q8WZ59 177 aa9.75□□□□□ -0.85
XRN1-203ENST00000463916 GALNT14Q96FL9 552 aa9.75□□□□□ -0.85
XRN1-203ENST00000463916 ATP6V0BQ99437 205 aa9.75□□□□□ -0.85
XRN1-203ENST00000463916 WFDC10AQ9H1F0 79 aa9.75□□□□□ -0.85
XRN1-203ENST00000463916 CACNG5Q9UF02 275 aa9.75□□□□□ -0.85
XRN1-203ENST00000463916 RNASE2P10153 161 aaKnown RBP9.75□□□□□ -0.85
XRN1-203ENST00000463916 CD81P60033 236 aa9.75□□□□□ -0.85
XRN1-203ENST00000463916 ZNF57Q68EA5 555 aaPredicted RBP9.75□□□□□ -0.85
XRN1-203ENST00000463916 FAM219AQ8IW50 185 aa9.75□□□□□ -0.85
XRN1-203ENST00000463916 SRRQ9GZT4 340 aa9.75□□□□□ -0.85
XRN1-203ENST00000463916 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.75□□□□□ -0.85
XRN1-203ENST00000463916 ZNF207O43670 478 aaKnown RBP9.74□□□□□ -0.85
XRN1-203ENST00000463916 SCAF4O95104 1147 aaKnown RBP9.74□□□□□ -0.85
XRN1-203ENST00000463916 SNCAP37840 140 aa9.74□□□□□ -0.85
XRN1-203ENST00000463916 HOXA1P49639 335 aaPredicted RBP9.74□□□□□ -0.85
XRN1-203ENST00000463916 MFAP4P55083 255 aa9.74□□□□□ -0.85
XRN1-203ENST00000463916 MLANAQ16655 118 aa9.74□□□□□ -0.85
XRN1-203ENST00000463916 WWC2-AS2Q96NR7 200 aa9.74□□□□□ -0.85
XRN1-203ENST00000463916 NEURL2Q9BR09 285 aa9.74□□□□□ -0.85
XRN1-203ENST00000463916 PDCD10Q9BUL8 212 aa9.74□□□□□ -0.85
XRN1-203ENST00000463916 PALMDQ9NP74 551 aa9.74□□□□□ -0.85
XRN1-203ENST00000463916 MRPL27Q9P0M9 148 aaKnown RBP9.74□□□□□ -0.85
XRN1-203ENST00000463916 KCNIP3Q9Y2W7 256 aa9.74□□□□□ -0.85
XRN1-203ENST00000463916 UFC1Q9Y3C8 167 aa9.74□□□□□ -0.85
XRN1-203ENST00000463916 NDUFA4O00483 81 aa9.73□□□□□ -0.85
XRN1-203ENST00000463916 NXPH3O95157 252 aa9.73□□□□□ -0.85
XRN1-203ENST00000463916 FCGR2BP31994 310 aaPredicted RBP9.73□□□□□ -0.85
XRN1-203ENST00000463916 ELLP55199 621 aaPredicted RBP9.73□□□□□ -0.85
XRN1-203ENST00000463916 SPCS3P61009 180 aa9.73□□□□□ -0.85
XRN1-203ENST00000463916 BAK1Q16611 211 aa9.73□□□□□ -0.85
XRN1-203ENST00000463916 BSXQ3C1V8 233 aa9.73□□□□□ -0.85
XRN1-203ENST00000463916 LYZL2Q7Z4W2 148 aa9.73□□□□□ -0.85
XRN1-203ENST00000463916 DEFB125Q8N687 156 aa9.73□□□□□ -0.85
XRN1-203ENST00000463916 SCGB3A2Q96PL1 93 aa9.73□□□□□ -0.85
XRN1-203ENST00000463916 C20orf24Q9BUV8 137 aa9.73□□□□□ -0.85
XRN1-203ENST00000463916 FNDC4Q9H6D8 234 aaPredicted RBP9.73□□□□□ -0.85
XRN1-203ENST00000463916 MRPL36Q9P0J6 103 aaKnown RBP9.73□□□□□ -0.85
XRN1-203ENST00000463916 KMT2CQ8NEZ4 4911 aaKnown RBP9.73□□□□□ -0.85
XRN1-203ENST00000463916 AP3S2P59780 193 aa9.73□□□□□ -0.85
XRN1-203ENST00000463916 SPANXN2Q5MJ10 180 aa9.73□□□□□ -0.85
XRN1-203ENST00000463916 TMED4Q7Z7H5 227 aa9.73□□□□□ -0.85
XRN1-203ENST00000463916 OR52E5Q8NH55 327 aa9.73□□□□□ -0.85
XRN1-203ENST00000463916 MARC2Q969Z3 335 aa9.73□□□□□ -0.85
XRN1-203ENST00000463916 RCHY1Q96PM5 261 aa9.73□□□□□ -0.85
XRN1-203ENST00000463916 SDHCQ99643 169 aaPredicted RBP9.73□□□□□ -0.85
XRN1-203ENST00000463916 TM2D3Q9BRN9 247 aa9.73□□□□□ -0.85
XRN1-203ENST00000463916 DAZ1Q9NQZ3 744 aaKnown RBP9.73□□□□□ -0.85
XRN1-203ENST00000463916 DNAH7Q8WXX0 4024 aa9.72□□□□□ -0.85
XRN1-203ENST00000463916 NUPL2O15504 423 aaKnown RBP9.72□□□□□ -0.85
XRN1-203ENST00000463916 FAUP35544 74 aaKnown RBP9.72□□□□□ -0.85
XRN1-203ENST00000463916 HAGHQ16775 308 aa9.72□□□□□ -0.85
XRN1-203ENST00000463916 IL22RA2Q969J5 263 aa9.72□□□□□ -0.85
XRN1-203ENST00000463916 TXN2Q99757 166 aa9.72□□□□□ -0.85
XRN1-203ENST00000463916 TUBA4BQ9H853 241 aa9.72□□□□□ -0.85
XRN1-203ENST00000463916 NMSQ5H8A3 153 aa9.71□□□□□ -0.85
XRN1-203ENST00000463916 LINC00322Q6ZN03 302 aaPredicted RBP9.71□□□□□ -0.85
XRN1-203ENST00000463916 TMEM170AQ8WVE7 144 aa9.71□□□□□ -0.85
XRN1-203ENST00000463916 RBMY1BA6NDE4 496 aaKnown RBP9.71□□□□□ -0.86
XRN1-203ENST00000463916 RBMY1EA6NEQ0 496 aaKnown RBP9.71□□□□□ -0.86
XRN1-203ENST00000463916 C15orf62A8K5M9 175 aa9.71□□□□□ -0.86
XRN1-203ENST00000463916 OR11H12B2RN74 326 aa9.71□□□□□ -0.86
XRN1-203ENST00000463916 K7EMT4 169 aa9.71□□□□□ -0.86
XRN1-203ENST00000463916 GNG7O60262 68 aa9.71□□□□□ -0.86
XRN1-203ENST00000463916 RBMY1DP0C7P1 496 aaKnown RBP9.71□□□□□ -0.86
XRN1-203ENST00000463916 CCR6P51684 374 aa9.71□□□□□ -0.86
XRN1-203ENST00000463916 OR10C1Q96KK4 312 aa9.71□□□□□ -0.86
XRN1-203ENST00000463916 ENY2Q9NPA8 101 aa9.71□□□□□ -0.86
XRN1-203ENST00000463916 GAR1Q9NY12 217 aaKnown RBP9.71□□□□□ -0.86
XRN1-203ENST00000463916 IGHV3-49A0A0A0MS15 119 aa9.7□□□□□ -0.86
XRN1-203ENST00000463916 A0A0B4J2A0 478 aa9.7□□□□□ -0.86
XRN1-203ENST00000463916 YIF1AO95070 293 aa9.7□□□□□ -0.86
XRN1-203ENST00000463916 SULT1A3P0DMM9 295 aa9.7□□□□□ -0.86
XRN1-203ENST00000463916 SULT1A4P0DMN0 295 aa9.7□□□□□ -0.86
XRN1-203ENST00000463916 SUB1P53999 127 aaKnown RBP eCLIP9.7□□□□□ -0.86
XRN1-203ENST00000463916 RELQ04864 619 aaPredicted RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms