RNA–Protein interactions for RNA: ENST00000463705.5

CHRNA4-202, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 5,201 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-202ENST00000463705 ZNF56Q15929 161 aa11.19□□□□□ -0.62
CHRNA4-202ENST00000463705 SDF2L1Q9HCN8 221 aa11.19□□□□□ -0.62
CHRNA4-202ENST00000463705 PEMTQ9UBM1 199 aa11.19□□□□□ -0.62
CHRNA4-202ENST00000463705 TCF20Q9UGU0 1960 aaKnown RBP11.19□□□□□ -0.62
CHRNA4-202ENST00000463705 FREM3P0C091 2139 aa11.19□□□□□ -0.62
CHRNA4-202ENST00000463705 NPFFR1Q9GZQ6 430 aa11.19□□□□□ -0.62
CHRNA4-202ENST00000463705 THADAQ6YHU6 1953 aa11.19□□□□□ -0.62
CHRNA4-202ENST00000463705 IGHV3-23P01764 117 aa11.19□□□□□ -0.62
CHRNA4-202ENST00000463705 Q9H3A6 140 aa11.19□□□□□ -0.62
CHRNA4-202ENST00000463705 RTTNQ86VV8 2226 aa11.18□□□□□ -0.62
CHRNA4-202ENST00000463705 TCRBV4S1A1TA0A5B7 111 aa11.18□□□□□ -0.62
CHRNA4-202ENST00000463705 RPUSD1Q9UJJ7 312 aaKnown RBP11.18□□□□□ -0.62
CHRNA4-202ENST00000463705 NCOR1O75376 2440 aa11.18□□□□□ -0.62
CHRNA4-202ENST00000463705 SMAD7O15105 426 aaKnown RBP11.18□□□□□ -0.62
CHRNA4-202ENST00000463705 CRXO43186 299 aaPredicted RBP11.18□□□□□ -0.62
CHRNA4-202ENST00000463705 CLEC19AQ6UXS0 136 aa11.18□□□□□ -0.62
CHRNA4-202ENST00000463705 COLCA1Q6ZS62 124 aa11.18□□□□□ -0.62
CHRNA4-202ENST00000463705 SGK494Q96LW2 274 aa11.18□□□□□ -0.62
CHRNA4-202ENST00000463705 ZNF257Q9Y2Q1 563 aa11.18□□□□□ -0.62
CHRNA4-202ENST00000463705 MYOD1P15172 320 aa11.18□□□□□ -0.62
CHRNA4-202ENST00000463705 SLC25A34Q6PIV7 304 aa11.18□□□□□ -0.62
CHRNA4-202ENST00000463705 TRBV20OR9-2A0A075B6H5 130 aa11.17□□□□□ -0.62
CHRNA4-202ENST00000463705 IGKV1-27A0A075B6S5 117 aa11.17□□□□□ -0.62
CHRNA4-202ENST00000463705 RAMP3O60896 148 aa11.17□□□□□ -0.62
CHRNA4-202ENST00000463705 LGALS3P17931 250 aaKnown RBP11.17□□□□□ -0.62
CHRNA4-202ENST00000463705 ATP5G3P48201 142 aa11.17□□□□□ -0.62
CHRNA4-202ENST00000463705 RNF5Q99942 180 aa11.17□□□□□ -0.62
CHRNA4-202ENST00000463705 TSC2P49815 1807 aa11.17□□□□□ -0.62
CHRNA4-202ENST00000463705 OOSP1A8MZH6 123 aa11.17□□□□□ -0.62
CHRNA4-202ENST00000463705 CEACAM4O75871 244 aa11.17□□□□□ -0.62
CHRNA4-202ENST00000463705 SPTBN2O15020 2390 aa11.17□□□□□ -0.62
CHRNA4-202ENST00000463705 NPFFO15130 113 aa11.17□□□□□ -0.62
CHRNA4-202ENST00000463705 TUBA4BQ9H853 241 aa11.17□□□□□ -0.62
CHRNA4-202ENST00000463705 A0A1B0GUT8 65 aa11.17□□□□□ -0.62
CHRNA4-202ENST00000463705 IZUMO1RA6ND01 250 aa11.17□□□□□ -0.62
CHRNA4-202ENST00000463705 ZNF207O43670 478 aaKnown RBP11.17□□□□□ -0.62
CHRNA4-202ENST00000463705 TGFAP01135 160 aa11.17□□□□□ -0.62
CHRNA4-202ENST00000463705 COX6CP09669 75 aa11.17□□□□□ -0.62
CHRNA4-202ENST00000463705 GPR61Q9BZJ8 451 aa11.17□□□□□ -0.62
CHRNA4-202ENST00000463705 IGHV3-35A0A0C4DH35 117 aa11.16□□□□□ -0.62
CHRNA4-202ENST00000463705 FGF16O43320 207 aa11.16□□□□□ -0.62
CHRNA4-202ENST00000463705 RPL24P83731 157 aaKnown RBP11.16□□□□□ -0.62
CHRNA4-202ENST00000463705 PRSS22Q9GZN4 317 aa11.16□□□□□ -0.62
CHRNA4-202ENST00000463705 OR9G9P0C7N8 305 aa11.16□□□□□ -0.62
CHRNA4-202ENST00000463705 ZNF25P17030 456 aaPredicted RBP11.16□□□□□ -0.62
CHRNA4-202ENST00000463705 ZNF600Q6ZNG1 722 aa11.16□□□□□ -0.62
CHRNA4-202ENST00000463705 C20orf204Q6ZNR8 217 aa11.16□□□□□ -0.62
CHRNA4-202ENST00000463705 JMJD8Q96S16 334 aa11.16□□□□□ -0.62
CHRNA4-202ENST00000463705 A0A1W2PRE2 83 aa11.16□□□□□ -0.62
CHRNA4-202ENST00000463705 IGKV3-15P01624 115 aa11.16□□□□□ -0.62
CHRNA4-202ENST00000463705 TFF1P04155 84 aa11.16□□□□□ -0.62
CHRNA4-202ENST00000463705 CCL20P78556 96 aa11.16□□□□□ -0.62
CHRNA4-202ENST00000463705 PSMG4Q5JS54 123 aa11.16□□□□□ -0.62
CHRNA4-202ENST00000463705 HEPN1Q6WQI6 88 aa11.16□□□□□ -0.62
CHRNA4-202ENST00000463705 ZNF418Q8TF45 676 aaPredicted RBP11.16□□□□□ -0.62
CHRNA4-202ENST00000463705 A1L4Q6 167 aa11.16□□□□□ -0.62
CHRNA4-202ENST00000463705 NAPSAO96009 420 aa11.16□□□□□ -0.62
CHRNA4-202ENST00000463705 FHL1Q13642 323 aa11.16□□□□□ -0.62
CHRNA4-202ENST00000463705 Q6ZS49 121 aa11.16□□□□□ -0.62
CHRNA4-202ENST00000463705 Q6ZS92 163 aa11.16□□□□□ -0.62
CHRNA4-202ENST00000463705 WDR83OSQ9Y284 106 aa11.16□□□□□ -0.62
CHRNA4-202ENST00000463705 MED12Q93074 2177 aa11.15□□□□□ -0.62
CHRNA4-202ENST00000463705 CBLN1P23435 193 aa11.15□□□□□ -0.62
CHRNA4-202ENST00000463705 EFNA4P52798 201 aa11.15□□□□□ -0.62
CHRNA4-202ENST00000463705 RNF125Q96EQ8 232 aa11.15□□□□□ -0.62
CHRNA4-202ENST00000463705 PRELID3AQ96N28 172 aa11.15□□□□□ -0.62
CHRNA4-202ENST00000463705 GBF1Q92538 1859 aa11.15□□□□□ -0.62
CHRNA4-202ENST00000463705 FAM181BA6NEQ2 426 aa11.15□□□□□ -0.62
CHRNA4-202ENST00000463705 OTX1P32242 354 aaPredicted RBP11.15□□□□□ -0.62
CHRNA4-202ENST00000463705 VDAC2P45880 294 aaPredicted RBP11.15□□□□□ -0.62
CHRNA4-202ENST00000463705 KIAA1644Q3SXP7 199 aa11.15□□□□□ -0.62
CHRNA4-202ENST00000463705 ZNF672Q499Z4 452 aaPredicted RBP11.15□□□□□ -0.62
CHRNA4-202ENST00000463705 CYB5R2Q6BCY4 276 aa11.15□□□□□ -0.62
CHRNA4-202ENST00000463705 TMEM178BH3BS89 294 aa11.15□□□□□ -0.62
CHRNA4-202ENST00000463705 CIRBPQ14011 172 aaKnown RBP11.15□□□□□ -0.62
CHRNA4-202ENST00000463705 CLDN16Q9Y5I7 305 aa11.15□□□□□ -0.62
CHRNA4-202ENST00000463705 C5orf63A6NC05 138 aa11.15□□□□□ -0.63
CHRNA4-202ENST00000463705 ETV2O00321 342 aaPredicted RBP11.15□□□□□ -0.63
CHRNA4-202ENST00000463705 LEPP41159 167 aa11.15□□□□□ -0.63
CHRNA4-202ENST00000463705 DNLZQ5SXM8 178 aa11.15□□□□□ -0.63
CHRNA4-202ENST00000463705 MINOS1Q5TGZ0 78 aa11.15□□□□□ -0.63
CHRNA4-202ENST00000463705 ST6GALNAC3Q8NDV1 305 aa11.15□□□□□ -0.63
CHRNA4-202ENST00000463705 WFIKKN1Q96NZ8 548 aa11.15□□□□□ -0.63
CHRNA4-202ENST00000463705 MINOS1-NBL1R4GNA1 71 aa11.15□□□□□ -0.63
CHRNA4-202ENST00000463705 MBD3L1Q8WWY6 194 aa11.14□□□□□ -0.63
CHRNA4-202ENST00000463705 ASCL2Q99929 193 aa11.14□□□□□ -0.63
CHRNA4-202ENST00000463705 S4R3C0 116 aa11.14□□□□□ -0.63
CHRNA4-202ENST00000463705 JOSD1Q15040 202 aaPredicted RBP11.14□□□□□ -0.63
CHRNA4-202ENST00000463705 FAM74A4Q5TZK3 123 aa11.14□□□□□ -0.63
CHRNA4-202ENST00000463705 ZCCHC24Q8N2G6 241 aaKnown RBP11.14□□□□□ -0.63
CHRNA4-202ENST00000463705 MOB4Q9Y3A3 225 aa11.14□□□□□ -0.63
CHRNA4-202ENST00000463705 IGHV2-26A0A0B4J1V2 119 aa11.14□□□□□ -0.63
CHRNA4-202ENST00000463705 DMRT1Q9Y5R6 373 aa11.14□□□□□ -0.63
CHRNA4-202ENST00000463705 CACNA1DQ01668 2161 aa11.14□□□□□ -0.63
CHRNA4-202ENST00000463705 IGHV3OR16-13A0A075B7E8 117 aa11.14□□□□□ -0.63
CHRNA4-202ENST00000463705 IGHV3-74A0A0B4J1X5 117 aa11.14□□□□□ -0.63
CHRNA4-202ENST00000463705 GRIFINA4D1Z8 144 aa11.14□□□□□ -0.63
CHRNA4-202ENST00000463705 TIMM23O14925 209 aa11.14□□□□□ -0.63
CHRNA4-202ENST00000463705 QRFPP83859 136 aa11.13□□□□□ -0.63
CHRNA4-202ENST00000463705 FER1L6-AS1Q8NA97 138 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms