RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 OR10J1P30954 320 aa10.25□□□□□ -0.77
VAPB-203ENST00000463370 RPL29P47914 159 aaKnown RBP10.25□□□□□ -0.77
VAPB-203ENST00000463370 SLC16A13Q7RTY0 426 aa10.25□□□□□ -0.77
VAPB-203ENST00000463370 ACY3Q96HD9 319 aa10.25□□□□□ -0.77
VAPB-203ENST00000463370 UNKLQ9H9P5 680 aaKnown RBP10.25□□□□□ -0.77
VAPB-203ENST00000463370 SMCO4Q9NRQ5 59 aa10.25□□□□□ -0.77
VAPB-203ENST00000463370 ZNF727A8MUV8 499 aa10.25□□□□□ -0.77
VAPB-203ENST00000463370 FOXH1O75593 365 aa10.25□□□□□ -0.77
VAPB-203ENST00000463370 IFNA1P01562 189 aa10.25□□□□□ -0.77
VAPB-203ENST00000463370 HOXB4P17483 251 aaPredicted RBP10.25□□□□□ -0.77
VAPB-203ENST00000463370 COMPP49747 757 aaPredicted RBP10.25□□□□□ -0.77
VAPB-203ENST00000463370 UBE2G2P60604 165 aa10.25□□□□□ -0.77
VAPB-203ENST00000463370 LMO4P61968 165 aa10.25□□□□□ -0.77
VAPB-203ENST00000463370 RBMS3Q6XE24 437 aaKnown RBP10.25□□□□□ -0.77
VAPB-203ENST00000463370 PPP1R27Q86WC6 154 aa10.25□□□□□ -0.77
VAPB-203ENST00000463370 NIPSNAP3BQ9BS92 247 aa10.25□□□□□ -0.77
VAPB-203ENST00000463370 ACTL6BO94805 426 aa10.24□□□□□ -0.77
VAPB-203ENST00000463370 PSMB3P49720 205 aa10.24□□□□□ -0.77
VAPB-203ENST00000463370 RHEBQ15382 184 aa10.24□□□□□ -0.77
VAPB-203ENST00000463370 SSX2Q16385 188 aa10.24□□□□□ -0.77
VAPB-203ENST00000463370 MMD2Q8IY49 270 aa10.24□□□□□ -0.77
VAPB-203ENST00000463370 TEX22C9J3V5 150 aa10.24□□□□□ -0.77
VAPB-203ENST00000463370 SOX15O60248 233 aa10.24□□□□□ -0.77
VAPB-203ENST00000463370 STAG3L2P0CL84 134 aa10.24□□□□□ -0.77
VAPB-203ENST00000463370 STAG3L3P0CL85 134 aa10.24□□□□□ -0.77
VAPB-203ENST00000463370 RPL27AP46776 148 aaKnown RBP10.24□□□□□ -0.77
VAPB-203ENST00000463370 ATP5IP56385 69 aaPredicted RBP10.24□□□□□ -0.77
VAPB-203ENST00000463370 KIAA0141Q14154 515 aaPredicted RBP10.24□□□□□ -0.77
VAPB-203ENST00000463370 OR4F5Q8NH21 305 aa10.24□□□□□ -0.77
VAPB-203ENST00000463370 OR4F4Q96R69 305 aa10.24□□□□□ -0.77
VAPB-203ENST00000463370 SIRPDQ9H106 197 aa10.24□□□□□ -0.77
VAPB-203ENST00000463370 IGHV3-21A0A0B4J1V1 117 aa10.23□□□□□ -0.77
VAPB-203ENST00000463370 NPPCP23582 126 aa10.23□□□□□ -0.77
VAPB-203ENST00000463370 TAGLN2P37802 199 aaKnown RBP10.23□□□□□ -0.77
VAPB-203ENST00000463370 ATP5G3P48201 142 aa10.23□□□□□ -0.77
VAPB-203ENST00000463370 RAB31Q13636 194 aa10.23□□□□□ -0.77
VAPB-203ENST00000463370 MMDQ15546 238 aa10.23□□□□□ -0.77
VAPB-203ENST00000463370 SPNS3Q6ZMD2 512 aa10.23□□□□□ -0.77
VAPB-203ENST00000463370 OR51G1Q8NGK1 321 aa10.23□□□□□ -0.77
VAPB-203ENST00000463370 RPUSD4Q96CM3 377 aaKnown RBP10.23□□□□□ -0.77
VAPB-203ENST00000463370 TVP23CQ96ET8 276 aa10.23□□□□□ -0.77
VAPB-203ENST00000463370 LPAR2Q9HBW0 351 aa10.23□□□□□ -0.77
VAPB-203ENST00000463370 MANBALQ9NQG1 85 aa10.23□□□□□ -0.77
VAPB-203ENST00000463370 DMRT1Q9Y5R6 373 aa10.23□□□□□ -0.77
VAPB-203ENST00000463370 FBN2P35556 2912 aa10.23□□□□□ -0.77
VAPB-203ENST00000463370 ZNF674Q2M3X9 581 aa10.23□□□□□ -0.77
VAPB-203ENST00000463370 MIR17HGQ75NE6 70 aa10.23□□□□□ -0.77
VAPB-203ENST00000463370 NPIPB3Q92617 1050 aa10.23□□□□□ -0.77
VAPB-203ENST00000463370 IGKV1D-37A0A075B6S9 117 aa10.22□□□□□ -0.77
VAPB-203ENST00000463370 CRYBA1P05813 215 aa10.22□□□□□ -0.77
VAPB-203ENST00000463370 GPX4P36969 197 aaPredicted RBP10.22□□□□□ -0.77
VAPB-203ENST00000463370 ZNF90Q03938 601 aa10.22□□□□□ -0.77
VAPB-203ENST00000463370 HABP2Q14520 560 aaPredicted RBP10.22□□□□□ -0.77
VAPB-203ENST00000463370 FAM78BQ5VT40 261 aa10.22□□□□□ -0.77
VAPB-203ENST00000463370 C1orf122Q6ZSJ8 110 aa10.22□□□□□ -0.77
VAPB-203ENST00000463370 RNASEH2CQ8TDP1 164 aaKnown RBP10.22□□□□□ -0.77
VAPB-203ENST00000463370 CACNG8Q8WXS5 425 aa10.22□□□□□ -0.77
VAPB-203ENST00000463370 HIST1H2BAQ96A08 127 aa10.22□□□□□ -0.77
VAPB-203ENST00000463370 KCNIP2Q9NS61 270 aa10.22□□□□□ -0.77
VAPB-203ENST00000463370 IGHV2-70DA0A0C4DH43 119 aa10.22□□□□□ -0.77
VAPB-203ENST00000463370 C11orf94C9JXX5 98 aa10.22□□□□□ -0.77
VAPB-203ENST00000463370 PLGLAQ15195 96 aa10.22□□□□□ -0.77
VAPB-203ENST00000463370 TMEM249Q2WGJ8 235 aa10.22□□□□□ -0.77
VAPB-203ENST00000463370 FAM24BQ8N5W8 94 aa10.22□□□□□ -0.77
VAPB-203ENST00000463370 KIR3DL3Q8N743 410 aa10.22□□□□□ -0.77
VAPB-203ENST00000463370 SRSF12Q8WXF0 261 aaKnown RBP10.22□□□□□ -0.77
VAPB-203ENST00000463370 TMEM37Q8WXS4 190 aa10.22□□□□□ -0.77
VAPB-203ENST00000463370 MISP3Q96FF7 219 aa10.22□□□□□ -0.77
VAPB-203ENST00000463370 EAF1Q96JC9 268 aaPredicted RBP10.22□□□□□ -0.77
VAPB-203ENST00000463370 SLC35E1Q96K37 410 aa10.22□□□□□ -0.77
VAPB-203ENST00000463370 TBX15Q96SF7 602 aa10.22□□□□□ -0.77
VAPB-203ENST00000463370 UBR5O95071 2799 aaPredicted RBP10.21□□□□□ -0.77
VAPB-203ENST00000463370 SPG11Q96JI7 2443 aa10.21□□□□□ -0.77
VAPB-203ENST00000463370 MORN5Q5VZ52 161 aa10.21□□□□□ -0.77
VAPB-203ENST00000463370 C15orf54Q8N8G6 183 aa10.21□□□□□ -0.77
VAPB-203ENST00000463370 SLC25A33Q9BSK2 321 aa10.21□□□□□ -0.77
VAPB-203ENST00000463370 PARLQ9H300 379 aa10.21□□□□□ -0.77
VAPB-203ENST00000463370 SDF2L1Q9HCN8 221 aa10.21□□□□□ -0.77
VAPB-203ENST00000463370 CXorf1O96002 111 aa10.21□□□□□ -0.78
VAPB-203ENST00000463370 CEACAM3P40198 252 aa10.21□□□□□ -0.78
VAPB-203ENST00000463370 RND2P52198 227 aa10.21□□□□□ -0.78
VAPB-203ENST00000463370 SUB1P53999 127 aaKnown RBP eCLIP10.21□□□□□ -0.78
VAPB-203ENST00000463370 RHOBP62745 196 aa10.21□□□□□ -0.78
VAPB-203ENST00000463370 HES1Q14469 280 aa10.21□□□□□ -0.78
VAPB-203ENST00000463370 CST9LP1Q5W188 147 aa10.21□□□□□ -0.78
VAPB-203ENST00000463370 PVRIGQ6DKI7 326 aa10.21□□□□□ -0.78
VAPB-203ENST00000463370 ZNF343Q6P1L6 599 aa10.21□□□□□ -0.78
VAPB-203ENST00000463370 YPEL4Q96NS1 127 aa10.21□□□□□ -0.78
VAPB-203ENST00000463370 CCL19Q99731 98 aa10.21□□□□□ -0.78
VAPB-203ENST00000463370 SMIM7Q9BQ49 75 aa10.21□□□□□ -0.78
VAPB-203ENST00000463370 FAM103A1Q9BTL3 118 aaKnown RBP10.21□□□□□ -0.78
VAPB-203ENST00000463370 YTHDF2Q9Y5A9 579 aaKnown RBP10.21□□□□□ -0.78
VAPB-203ENST00000463370 NBR2O15453 112 aa10.2□□□□□ -0.78
VAPB-203ENST00000463370 TOX4O94842 621 aa10.2□□□□□ -0.78
VAPB-203ENST00000463370 OR2C1O95371 312 aa10.2□□□□□ -0.78
VAPB-203ENST00000463370 GCHFRP30047 84 aa10.2□□□□□ -0.78
VAPB-203ENST00000463370 MAS1LP35410 378 aa10.2□□□□□ -0.78
VAPB-203ENST00000463370 CYP2G1PQ6ZSU1 146 aa10.2□□□□□ -0.78
VAPB-203ENST00000463370 ZNF114Q8NC26 417 aa10.2□□□□□ -0.78
VAPB-203ENST00000463370 NRGNQ92686 78 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms