RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 KLHL12Q53G59 568 aa1.75□□□□□ -2.13
SMC4-203ENST00000462668 H1FOOQ8IZA3 346 aaPredicted RBP1.75□□□□□ -2.13
SMC4-203ENST00000462668 FER1L6-AS1Q8NA97 138 aa1.75□□□□□ -2.13
SMC4-203ENST00000462668 OR51A2Q8NGJ7 313 aa1.75□□□□□ -2.13
SMC4-203ENST00000462668 OR2T27Q8NH04 317 aa1.75□□□□□ -2.13
SMC4-203ENST00000462668 UBE2WQ96B02 151 aa1.75□□□□□ -2.13
SMC4-203ENST00000462668 PIKFYVEQ9Y2I7 2098 aa1.75□□□□□ -2.13
SMC4-203ENST00000462668 CCNB3Q8WWL7 1395 aa1.75□□□□□ -2.13
SMC4-203ENST00000462668 IGKV1D-43A0A0B4J1Z2 117 aa1.75□□□□□ -2.13
SMC4-203ENST00000462668 GNG14A0A1W2PPG7 69 aa1.75□□□□□ -2.13
SMC4-203ENST00000462668 A8MU10 97 aa1.75□□□□□ -2.13
SMC4-203ENST00000462668 ORC5O43913 435 aa1.75□□□□□ -2.13
SMC4-203ENST00000462668 SULT1A3P0DMM9 295 aa1.75□□□□□ -2.13
SMC4-203ENST00000462668 SULT1A4P0DMN0 295 aa1.75□□□□□ -2.13
SMC4-203ENST00000462668 SCGB1A1P11684 91 aa1.75□□□□□ -2.13
SMC4-203ENST00000462668 NPPCP23582 126 aa1.75□□□□□ -2.13
SMC4-203ENST00000462668 OR8G1Q15617 311 aa1.75□□□□□ -2.13
SMC4-203ENST00000462668 CST6Q15828 149 aa1.75□□□□□ -2.13
SMC4-203ENST00000462668 ATP5L2Q7Z4Y8 100 aa1.75□□□□□ -2.13
SMC4-203ENST00000462668 FNDC9Q8TBE3 224 aa1.75□□□□□ -2.13
SMC4-203ENST00000462668 GPR146Q96CH1 333 aa1.75□□□□□ -2.13
SMC4-203ENST00000462668 CNBD2Q96M20 576 aa1.75□□□□□ -2.13
SMC4-203ENST00000462668 TRIB3Q96RU7 358 aa1.75□□□□□ -2.13
SMC4-203ENST00000462668 TP53TG3Q9ULZ0 132 aa1.75□□□□□ -2.13
SMC4-203ENST00000462668 UFC1Q9Y3C8 167 aa1.75□□□□□ -2.13
SMC4-203ENST00000462668 PHLDA3Q9Y5J5 127 aa1.75□□□□□ -2.13
SMC4-203ENST00000462668 BAHCC1Q9P281 2608 aa1.75□□□□□ -2.13
SMC4-203ENST00000462668 USP24Q9UPU5 2620 aa1.75□□□□□ -2.13
SMC4-203ENST00000462668 CELSR3Q9NYQ7 3312 aa1.75□□□□□ -2.13
SMC4-203ENST00000462668 TRAPPC13A5PLN9 417 aa1.75□□□□□ -2.13
SMC4-203ENST00000462668 KPNA4O00629 521 aaPredicted RBP1.75□□□□□ -2.13
SMC4-203ENST00000462668 ZNF324O75467 553 aaPredicted RBP1.75□□□□□ -2.13
SMC4-203ENST00000462668 OR2J2O76002 312 aa1.75□□□□□ -2.13
SMC4-203ENST00000462668 CXorf1O96002 111 aa1.75□□□□□ -2.13
SMC4-203ENST00000462668 LGALS1P09382 135 aaKnown RBP1.75□□□□□ -2.13
SMC4-203ENST00000462668 SPI1P17947 270 aa1.75□□□□□ -2.13
SMC4-203ENST00000462668 RPS4Y1P22090 263 aaKnown RBP1.75□□□□□ -2.13
SMC4-203ENST00000462668 ALDH3A1P30838 453 aa1.75□□□□□ -2.13
SMC4-203ENST00000462668 SARNPP82979 210 aaKnown RBP1.75□□□□□ -2.13
SMC4-203ENST00000462668 TOMM20LQ6UXN7 152 aa1.75□□□□□ -2.13
SMC4-203ENST00000462668 Q6ZQT7 251 aa1.75□□□□□ -2.13
SMC4-203ENST00000462668 SMIM15Q7Z3B0 74 aa1.75□□□□□ -2.13
SMC4-203ENST00000462668 GRINAQ7Z429 371 aa1.75□□□□□ -2.13
SMC4-203ENST00000462668 DYNAPQ8N1N2 210 aa1.75□□□□□ -2.13
SMC4-203ENST00000462668 RNF175Q8N4F7 328 aa1.75□□□□□ -2.13
SMC4-203ENST00000462668 ERMAPQ96PL5 475 aaPredicted RBP1.75□□□□□ -2.13
SMC4-203ENST00000462668 OR5V1Q9UGF6 321 aa1.75□□□□□ -2.13
SMC4-203ENST00000462668 IGSF23A1L1A6 192 aa1.74□□□□□ -2.13
SMC4-203ENST00000462668 KNCNA6PVL3 124 aa1.74□□□□□ -2.13
SMC4-203ENST00000462668 SLC17A3O00476 420 aa1.74□□□□□ -2.13
SMC4-203ENST00000462668 COX7A2LO14548 114 aa1.74□□□□□ -2.13
SMC4-203ENST00000462668 HLA-DRB1P01911 266 aa1.74□□□□□ -2.13
SMC4-203ENST00000462668 TRGV3P03979 118 aa1.74□□□□□ -2.13
SMC4-203ENST00000462668 RBM11P57052 281 aaKnown RBP1.74□□□□□ -2.13
SMC4-203ENST00000462668 CCL20P78556 96 aa1.74□□□□□ -2.13
SMC4-203ENST00000462668 CAV1Q03135 178 aa1.74□□□□□ -2.13
SMC4-203ENST00000462668 OR13C4Q8NGS5 318 aa1.74□□□□□ -2.13
SMC4-203ENST00000462668 PYDC1Q8WXC3 89 aa1.74□□□□□ -2.13
SMC4-203ENST00000462668 CDX2Q99626 313 aaPredicted RBP1.74□□□□□ -2.13
SMC4-203ENST00000462668 SPIN2AQ99865 258 aa1.74□□□□□ -2.13
SMC4-203ENST00000462668 SPIN2BQ9BPZ2 258 aa1.74□□□□□ -2.13
SMC4-203ENST00000462668 DNAH7Q8WXX0 4024 aa1.74□□□□□ -2.13
SMC4-203ENST00000462668 COL5A1P20908 1838 aaPredicted RBP1.74□□□□□ -2.13
SMC4-203ENST00000462668 TRBV19A0A075B6N1 114 aa1.74□□□□□ -2.13
SMC4-203ENST00000462668 IGKV1-5P01602 117 aa1.74□□□□□ -2.13
SMC4-203ENST00000462668 PPBPP02775 128 aa1.74□□□□□ -2.13
SMC4-203ENST00000462668 GABRA3P34903 492 aa1.74□□□□□ -2.13
SMC4-203ENST00000462668 DHRS2Q13268 280 aa1.74□□□□□ -2.13
SMC4-203ENST00000462668 C3orf33Q6P1S2 294 aa1.74□□□□□ -2.13
SMC4-203ENST00000462668 GOLT1AQ6ZVE7 132 aa1.74□□□□□ -2.13
SMC4-203ENST00000462668 C2orf15Q8WU43 125 aaKnown RBP1.74□□□□□ -2.13
SMC4-203ENST00000462668 RMI2Q96E14 147 aa1.74□□□□□ -2.13
SMC4-203ENST00000462668 PTPRJQ12913 1337 aa1.74□□□□□ -2.13
SMC4-203ENST00000462668 ATMQ13315 3056 aa1.74□□□□□ -2.13
SMC4-203ENST00000462668 MYH13Q9UKX3 1938 aa1.74□□□□□ -2.13
SMC4-203ENST00000462668 TRBV24-1A0A075B6N3 115 aa1.74□□□□□ -2.13
SMC4-203ENST00000462668 LINC00862A6NCI5 91 aa1.74□□□□□ -2.13
SMC4-203ENST00000462668 ZNF729A6NN14 1252 aaPredicted RBP1.74□□□□□ -2.13
SMC4-203ENST00000462668 ADRA2AP08913 450 aa1.74□□□□□ -2.13
SMC4-203ENST00000462668 ORM2P19652 201 aa1.74□□□□□ -2.13
SMC4-203ENST00000462668 CRYBB3P26998 211 aa1.74□□□□□ -2.13
SMC4-203ENST00000462668 RPS11P62280 158 aaKnown RBP eCLIP1.74□□□□□ -2.13
SMC4-203ENST00000462668 Q6ZS49 121 aa1.74□□□□□ -2.13
SMC4-203ENST00000462668 OR9A2Q8NGT5 310 aa1.74□□□□□ -2.13
SMC4-203ENST00000462668 L3HYPDHQ96EM0 354 aa1.74□□□□□ -2.13
SMC4-203ENST00000462668 BTF3L4Q96K17 158 aa1.74□□□□□ -2.13
SMC4-203ENST00000462668 MRPL40Q9NQ50 206 aaKnown RBP1.74□□□□□ -2.13
SMC4-203ENST00000462668 C14orf105Q9NVL8 296 aa1.74□□□□□ -2.13
SMC4-203ENST00000462668 PRNDQ9UKY0 176 aa1.74□□□□□ -2.13
SMC4-203ENST00000462668 FAM215AQ9Y5M1 114 aa1.74□□□□□ -2.13
SMC4-203ENST00000462668 KMT2AQ03164 3969 aa1.74□□□□□ -2.13
SMC4-203ENST00000462668 DYNC2H1Q8NCM8 4307 aaKnown RBP1.74□□□□□ -2.13
SMC4-203ENST00000462668 LEUTXA8MZ59 168 aa1.74□□□□□ -2.13
SMC4-203ENST00000462668 CD28P10747 220 aa1.74□□□□□ -2.13
SMC4-203ENST00000462668 BSPH1Q075Z2 132 aa1.74□□□□□ -2.13
SMC4-203ENST00000462668 SLC7A6Q92536 515 aa1.74□□□□□ -2.13
SMC4-203ENST00000462668 IGF2BP2-AS1Q96M15 143 aa1.74□□□□□ -2.13
SMC4-203ENST00000462668 GPR82Q96P67 336 aa1.74□□□□□ -2.13
SMC4-203ENST00000462668 PKIGQ9Y2B9 76 aa1.74□□□□□ -2.13
SMC4-203ENST00000462668 KMT2CQ8NEZ4 4911 aaKnown RBP1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms