RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 CDRT1O95170 752 aa3.34□□□□□ -1.87
COPS3-204ENST00000462236 CST1P01037 141 aa3.34□□□□□ -1.87
COPS3-204ENST00000462236 GLAP06280 429 aa3.34□□□□□ -1.87
COPS3-204ENST00000462236 ALDH3B2P48448 385 aa3.34□□□□□ -1.87
COPS3-204ENST00000462236 DAPP51397 102 aa3.34□□□□□ -1.87
COPS3-204ENST00000462236 PLGLAQ15195 96 aa3.34□□□□□ -1.87
COPS3-204ENST00000462236 RSU1Q15404 277 aa3.34□□□□□ -1.87
COPS3-204ENST00000462236 HMGN3Q15651 99 aa3.34□□□□□ -1.87
COPS3-204ENST00000462236 MEDAGQ5VYS4 303 aa3.34□□□□□ -1.87
COPS3-204ENST00000462236 ZNF880Q6PDB4 577 aa3.34□□□□□ -1.87
COPS3-204ENST00000462236 GID4Q8IVV7 300 aa3.34□□□□□ -1.87
COPS3-204ENST00000462236 Q8NAQ8 132 aa3.34□□□□□ -1.87
COPS3-204ENST00000462236 OR5D14Q8NGL3 314 aa3.34□□□□□ -1.87
COPS3-204ENST00000462236 GRPEL2Q8TAA5 225 aa3.34□□□□□ -1.87
COPS3-204ENST00000462236 MRPL30Q8TCC3 161 aaKnown RBP3.34□□□□□ -1.87
COPS3-204ENST00000462236 TNFAIP8L1Q8WVP5 186 aa3.34□□□□□ -1.87
COPS3-204ENST00000462236 DNAJC9Q8WXX5 260 aa3.34□□□□□ -1.87
COPS3-204ENST00000462236 MRPS24Q96EL2 167 aaKnown RBP3.34□□□□□ -1.87
COPS3-204ENST00000462236 PELI1Q96FA3 418 aa3.34□□□□□ -1.87
COPS3-204ENST00000462236 GALNT14Q96FL9 552 aa3.34□□□□□ -1.87
COPS3-204ENST00000462236 TSNAXQ99598 290 aaKnown RBP3.34□□□□□ -1.87
COPS3-204ENST00000462236 RARRES2Q99969 163 aa3.34□□□□□ -1.87
COPS3-204ENST00000462236 PIPOXQ9P0Z9 390 aa3.34□□□□□ -1.87
COPS3-204ENST00000462236 GNG8Q9UK08 70 aa3.34□□□□□ -1.87
COPS3-204ENST00000462236 TRAPPC2LQ9UL33 140 aa3.34□□□□□ -1.87
COPS3-204ENST00000462236 FAT3Q8TDW7 4589 aa3.33□□□□□ -1.88
COPS3-204ENST00000462236 C16orf90A8MZG2 172 aa3.33□□□□□ -1.88
COPS3-204ENST00000462236 PPP5D1E7EU14 171 aa3.33□□□□□ -1.88
COPS3-204ENST00000462236 M0R2N4 97 aa3.33□□□□□ -1.88
COPS3-204ENST00000462236 PHOX2AO14813 284 aa3.33□□□□□ -1.88
COPS3-204ENST00000462236 GGCTO75223 188 aaKnown RBP3.33□□□□□ -1.88
COPS3-204ENST00000462236 GPX5O75715 221 aa3.33□□□□□ -1.88
COPS3-204ENST00000462236 HLA-AP01891 365 aaKnown RBP3.33□□□□□ -1.88
COPS3-204ENST00000462236 MAS1P04201 325 aa3.33□□□□□ -1.88
COPS3-204ENST00000462236 HTR1AP08908 422 aa3.33□□□□□ -1.88
COPS3-204ENST00000462236 P0DMU3 169 aa3.33□□□□□ -1.88
COPS3-204ENST00000462236 FAM231AP0DMU4 169 aa3.33□□□□□ -1.88
COPS3-204ENST00000462236 FAM231CP0DMU5 169 aa3.33□□□□□ -1.88
COPS3-204ENST00000462236 PGAM2P15259 253 aa3.33□□□□□ -1.88
COPS3-204ENST00000462236 GALP22466 123 aa3.33□□□□□ -1.88
COPS3-204ENST00000462236 KRTAP5-9P26371 169 aa3.33□□□□□ -1.88
COPS3-204ENST00000462236 LGALS7P47929 136 aa3.33□□□□□ -1.88
COPS3-204ENST00000462236 RHOGP84095 191 aa3.33□□□□□ -1.88
COPS3-204ENST00000462236 TMED1Q13445 227 aa3.33□□□□□ -1.88
COPS3-204ENST00000462236 RIPK1Q13546 671 aa3.33□□□□□ -1.88
COPS3-204ENST00000462236 SLC22A6Q4U2R8 563 aa3.33□□□□□ -1.88
COPS3-204ENST00000462236 LPCAT4Q643R3 524 aa3.33□□□□□ -1.88
COPS3-204ENST00000462236 PDPNQ86YL7 162 aa3.33□□□□□ -1.88
COPS3-204ENST00000462236 STX19Q8N4C7 294 aa3.33□□□□□ -1.88
COPS3-204ENST00000462236 TTC9CQ8N5M4 171 aa3.33□□□□□ -1.88
COPS3-204ENST00000462236 OR1L6Q8NGR2 347 aa3.33□□□□□ -1.88
COPS3-204ENST00000462236 OR11H2Q8NH07 326 aa3.33□□□□□ -1.88
COPS3-204ENST00000462236 PTX4Q96A99 478 aa3.33□□□□□ -1.88
COPS3-204ENST00000462236 RAB3CQ96E17 227 aa3.33□□□□□ -1.88
COPS3-204ENST00000462236 NRBF2Q96F24 287 aa3.33□□□□□ -1.88
COPS3-204ENST00000462236 PAXXQ9BUH6 204 aa3.33□□□□□ -1.88
COPS3-204ENST00000462236 METTL9Q9H1A3 318 aa3.33□□□□□ -1.88
COPS3-204ENST00000462236 SPACA1Q9HBV2 294 aa3.33□□□□□ -1.88
COPS3-204ENST00000462236 PRR34Q9NV39 138 aa3.33□□□□□ -1.88
COPS3-204ENST00000462236 EHFQ9NZC4 300 aa3.33□□□□□ -1.88
COPS3-204ENST00000462236 ENOPH1Q9UHY7 261 aa3.33□□□□□ -1.88
COPS3-204ENST00000462236 TP53TG3Q9ULZ0 132 aa3.33□□□□□ -1.88
COPS3-204ENST00000462236 PKHD1L1Q86WI1 4243 aa3.33□□□□□ -1.88
COPS3-204ENST00000462236 TRAV10A0A0B4J240 114 aa3.32□□□□□ -1.88
COPS3-204ENST00000462236 TMEM212A6NML5 194 aa3.32□□□□□ -1.88
COPS3-204ENST00000462236 MCRIP1C9JLW8 97 aa3.32□□□□□ -1.88
COPS3-204ENST00000462236 ZNF780AO75290 641 aaPredicted RBP3.32□□□□□ -1.88
COPS3-204ENST00000462236 NAPSAO96009 420 aa3.32□□□□□ -1.88
COPS3-204ENST00000462236 PRH1P02810 166 aa3.32□□□□□ -1.88
COPS3-204ENST00000462236 RPSAP08865 295 aaKnown RBP3.32□□□□□ -1.88
COPS3-204ENST00000462236 GIG44P09565 113 aaPredicted RBP3.32□□□□□ -1.88
COPS3-204ENST00000462236 SCTP09683 121 aa3.32□□□□□ -1.88
COPS3-204ENST00000462236 RBMY1A1P0DJD3 496 aaKnown RBP3.32□□□□□ -1.88
COPS3-204ENST00000462236 RBMY1CP0DJD4 496 aa3.32□□□□□ -1.88
COPS3-204ENST00000462236 IGFBP3P17936 291 aaPredicted RBP3.32□□□□□ -1.88
COPS3-204ENST00000462236 RAB3AP20336 220 aa3.32□□□□□ -1.88
COPS3-204ENST00000462236 SERPINA2P20848 420 aa3.32□□□□□ -1.88
COPS3-204ENST00000462236 PSMB6P28072 239 aa3.32□□□□□ -1.88
COPS3-204ENST00000462236 MAP2K4P45985 399 aa3.32□□□□□ -1.88
COPS3-204ENST00000462236 MEOX2P50222 304 aa3.32□□□□□ -1.88
COPS3-204ENST00000462236 ATP5G2Q06055 141 aa3.32□□□□□ -1.88
COPS3-204ENST00000462236 RBMY1FQ15415 496 aaKnown RBP3.32□□□□□ -1.88
COPS3-204ENST00000462236 KDM4DQ6B0I6 523 aa3.32□□□□□ -1.88
COPS3-204ENST00000462236 UNQ9165/PRO28630Q6UXU0 137 aa3.32□□□□□ -1.88
COPS3-204ENST00000462236 FAM220AQ7Z4H9 259 aa3.32□□□□□ -1.88
COPS3-204ENST00000462236 DEFB107AQ8IZN7 70 aa3.32□□□□□ -1.88
COPS3-204ENST00000462236 NECAP1Q8NC96 275 aa3.32□□□□□ -1.88
COPS3-204ENST00000462236 OR10H4Q8NGA5 316 aa3.32□□□□□ -1.88
COPS3-204ENST00000462236 CANT1Q8WVQ1 401 aa3.32□□□□□ -1.88
COPS3-204ENST00000462236 MARC2Q969Z3 335 aa3.32□□□□□ -1.88
COPS3-204ENST00000462236 GALMQ96C23 342 aa3.32□□□□□ -1.88
COPS3-204ENST00000462236 CPNE2Q96FN4 548 aaPredicted RBP3.32□□□□□ -1.88
COPS3-204ENST00000462236 ZNF414Q96IQ9 312 aa3.32□□□□□ -1.88
COPS3-204ENST00000462236 ABHD14BQ96IU4 210 aa3.32□□□□□ -1.88
COPS3-204ENST00000462236 IL4I1Q96RQ9 567 aa3.32□□□□□ -1.88
COPS3-204ENST00000462236 PRRG3Q9BZD7 231 aa3.32□□□□□ -1.88
COPS3-204ENST00000462236 ZNF436Q9C0F3 470 aaPredicted RBP3.32□□□□□ -1.88
COPS3-204ENST00000462236 ISG20L2Q9H9L3 353 aaKnown RBP3.32□□□□□ -1.88
COPS3-204ENST00000462236 COA4Q9NYJ1 87 aa3.32□□□□□ -1.88
COPS3-204ENST00000462236 MRPL27Q9P0M9 148 aaKnown RBP3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms