RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 IL36BQ9NZH7 164 aa10.13□□□□□ -0.79
COL4A6-204ENST00000461897 YTHDF2Q9Y5A9 579 aaKnown RBP10.13□□□□□ -0.79
COL4A6-204ENST00000461897 ZFYVE26Q68DK2 2539 aa10.12□□□□□ -0.79
COL4A6-204ENST00000461897 KBTBD11-OT1A0A1B0GTJ5 212 aa10.12□□□□□ -0.79
COL4A6-204ENST00000461897 LYNX1G3V0Z9 82 aa10.12□□□□□ -0.79
COL4A6-204ENST00000461897 LYNX1P0DP58 116 aa10.12□□□□□ -0.79
COL4A6-204ENST00000461897 NPY1RP25929 384 aa10.12□□□□□ -0.79
COL4A6-204ENST00000461897 ATP5IP56385 69 aaPredicted RBP10.12□□□□□ -0.79
COL4A6-204ENST00000461897 RAB31Q13636 194 aa10.12□□□□□ -0.79
COL4A6-204ENST00000461897 LYPD2Q6UXB3 125 aa10.12□□□□□ -0.79
COL4A6-204ENST00000461897 C1orf229Q6ZS94 237 aaPredicted RBP10.12□□□□□ -0.79
COL4A6-204ENST00000461897 VKORC1L1Q8N0U8 176 aa10.12□□□□□ -0.79
COL4A6-204ENST00000461897 STPG3Q8N7X2 389 aa10.12□□□□□ -0.79
COL4A6-204ENST00000461897 SLC24A4Q8NFF2 622 aa10.12□□□□□ -0.79
COL4A6-204ENST00000461897 OR5T1Q8NG75 326 aa10.12□□□□□ -0.79
COL4A6-204ENST00000461897 BBC3Q96PG8 261 aaPredicted RBP10.12□□□□□ -0.79
COL4A6-204ENST00000461897 CTSZQ9UBR2 303 aa10.12□□□□□ -0.79
COL4A6-204ENST00000461897 KIR2DL5BA0A0G2JN68 375 aa10.11□□□□□ -0.79
COL4A6-204ENST00000461897 KIR2DL5BA0A0G2JPC4 375 aa10.11□□□□□ -0.79
COL4A6-204ENST00000461897 PGPEP1LA6NFU8 196 aa10.11□□□□□ -0.79
COL4A6-204ENST00000461897 ZNF705GA8MUZ8 300 aaPredicted RBP10.11□□□□□ -0.79
COL4A6-204ENST00000461897 IGFBP2P18065 325 aa10.11□□□□□ -0.79
COL4A6-204ENST00000461897 TMEM30BQ3MIR4 351 aa10.11□□□□□ -0.79
COL4A6-204ENST00000461897 OR4A47Q6IF82 309 aa10.11□□□□□ -0.79
COL4A6-204ENST00000461897 KIR2DL5AQ8N109 375 aa10.11□□□□□ -0.79
COL4A6-204ENST00000461897 ZNF439Q8NDP4 499 aa10.11□□□□□ -0.79
COL4A6-204ENST00000461897 CBLN4Q9NTU7 201 aa10.11□□□□□ -0.79
COL4A6-204ENST00000461897 AURKAIP1Q9NWT8 199 aaPredicted RBP10.11□□□□□ -0.79
COL4A6-204ENST00000461897 PRB1P04280 392 aa10.1□□□□□ -0.79
COL4A6-204ENST00000461897 OR10J4P0C629 311 aa10.1□□□□□ -0.79
COL4A6-204ENST00000461897 LINC00869P0C866 280 aa10.1□□□□□ -0.79
COL4A6-204ENST00000461897 NDUFB7P17568 137 aa10.1□□□□□ -0.79
COL4A6-204ENST00000461897 COL8A2P25067 703 aa10.1□□□□□ -0.79
COL4A6-204ENST00000461897 RPL31P62899 125 aaKnown RBP10.1□□□□□ -0.79
COL4A6-204ENST00000461897 CT45A1Q5HYN5 189 aa10.1□□□□□ -0.79
COL4A6-204ENST00000461897 C1orf194Q5T5A4 169 aa10.1□□□□□ -0.79
COL4A6-204ENST00000461897 PNKDQ8N490 385 aa10.1□□□□□ -0.79
COL4A6-204ENST00000461897 CT45A3Q8NHU0 189 aa10.1□□□□□ -0.79
COL4A6-204ENST00000461897 MISP3Q96FF7 219 aa10.1□□□□□ -0.79
COL4A6-204ENST00000461897 UHRF2Q96PU4 802 aa10.1□□□□□ -0.79
COL4A6-204ENST00000461897 SEPSECSQ9HD40 501 aaKnown RBP10.1□□□□□ -0.79
COL4A6-204ENST00000461897 FKBP11Q9NYL4 201 aa10.1□□□□□ -0.79
COL4A6-204ENST00000461897 IDI2-AS1Q9NZ38 188 aa10.1□□□□□ -0.79
COL4A6-204ENST00000461897 ZNF257Q9Y2Q1 563 aa10.1□□□□□ -0.79
COL4A6-204ENST00000461897 TRBV9A0A0B4J1U6 114 aa10.1□□□□□ -0.79
COL4A6-204ENST00000461897 K7EN84 100 aa10.1□□□□□ -0.79
COL4A6-204ENST00000461897 IGHV3-7P01780 117 aa10.1□□□□□ -0.79
COL4A6-204ENST00000461897 ADMP35318 185 aa10.1□□□□□ -0.79
COL4A6-204ENST00000461897 LGALS4P56470 323 aa10.1□□□□□ -0.79
COL4A6-204ENST00000461897 PAFAH1B2P68402 229 aa10.1□□□□□ -0.79
COL4A6-204ENST00000461897 TMEM256Q8N2U0 113 aa10.1□□□□□ -0.79
COL4A6-204ENST00000461897 KAAG1Q9UBP8 84 aa10.1□□□□□ -0.79
COL4A6-204ENST00000461897 SLC45A2Q9UMX9 530 aa10.1□□□□□ -0.79
COL4A6-204ENST00000461897 LINC00312Q9Y6C7 94 aa10.1□□□□□ -0.79
COL4A6-204ENST00000461897 SAA2-SAA4A0A096LPE2 208 aa10.09□□□□□ -0.79
COL4A6-204ENST00000461897 MMP23AO75900 390 aa10.09□□□□□ -0.79
COL4A6-204ENST00000461897 CA2P00918 260 aa10.09□□□□□ -0.79
COL4A6-204ENST00000461897 SAA2P0DJI9 122 aaPredicted RBP10.09□□□□□ -0.79
COL4A6-204ENST00000461897 OR10J1P30954 320 aa10.09□□□□□ -0.79
COL4A6-204ENST00000461897 ERVFC1-1P60608 527 aa10.09□□□□□ -0.79
COL4A6-204ENST00000461897 SPATA31B1PQ5VZV4 182 aa10.09□□□□□ -0.79
COL4A6-204ENST00000461897 MRPL52Q86TS9 123 aaKnown RBP10.09□□□□□ -0.79
COL4A6-204ENST00000461897 DTX2Q86UW9 622 aa10.09□□□□□ -0.79
COL4A6-204ENST00000461897 SSMEM1Q8WWF3 244 aa10.09□□□□□ -0.79
COL4A6-204ENST00000461897 LEAP2Q969E1 77 aa10.09□□□□□ -0.79
COL4A6-204ENST00000461897 EAF1Q96JC9 268 aaPredicted RBP10.09□□□□□ -0.79
COL4A6-204ENST00000461897 C19orf24Q9BVV8 132 aa10.09□□□□□ -0.79
COL4A6-204ENST00000461897 TMEM167BQ9NRX6 74 aa10.09□□□□□ -0.79
COL4A6-204ENST00000461897 NAGKQ9UJ70 344 aa10.09□□□□□ -0.79
COL4A6-204ENST00000461897 PRNDQ9UKY0 176 aa10.09□□□□□ -0.79
COL4A6-204ENST00000461897 TP53TG3Q9ULZ0 132 aa10.09□□□□□ -0.79
COL4A6-204ENST00000461897 FLNCQ14315 2725 aa10.09□□□□□ -0.79
COL4A6-204ENST00000461897 hADV38S2A0JD32 116 aa10.08□□□□□ -0.8
COL4A6-204ENST00000461897 NUPR1O60356 82 aa10.08□□□□□ -0.8
COL4A6-204ENST00000461897 LY6HO94772 140 aa10.08□□□□□ -0.8
COL4A6-204ENST00000461897 MEF2CQ06413 473 aaPredicted RBP10.08□□□□□ -0.8
COL4A6-204ENST00000461897 Q0VG73 95 aa10.08□□□□□ -0.8
COL4A6-204ENST00000461897 SLC35E1Q96K37 410 aa10.08□□□□□ -0.8
COL4A6-204ENST00000461897 ENY2Q9NPA8 101 aa10.08□□□□□ -0.8
COL4A6-204ENST00000461897 RALYQ9UKM9 306 aaKnown RBP10.08□□□□□ -0.8
COL4A6-204ENST00000461897 YLPM1P49750 1951 aaKnown RBP10.08□□□□□ -0.8
COL4A6-204ENST00000461897 NDUFB3O43676 98 aa10.08□□□□□ -0.8
COL4A6-204ENST00000461897 RNF224P0DH78 156 aa10.08□□□□□ -0.8
COL4A6-204ENST00000461897 LINC00310P59036 64 aa10.08□□□□□ -0.8
COL4A6-204ENST00000461897 MRPS11P82912 194 aaKnown RBP10.08□□□□□ -0.8
COL4A6-204ENST00000461897 PRCDQ00LT1 54 aa10.08□□□□□ -0.8
COL4A6-204ENST00000461897 ZNF90Q03938 601 aa10.08□□□□□ -0.8
COL4A6-204ENST00000461897 LRRC10Q5BKY1 277 aa10.08□□□□□ -0.8
COL4A6-204ENST00000461897 CMTM2Q8TAZ6 248 aa10.08□□□□□ -0.8
COL4A6-204ENST00000461897 MS4A10Q96PG2 267 aa10.08□□□□□ -0.8
COL4A6-204ENST00000461897 RAB1BQ9H0U4 201 aa10.08□□□□□ -0.8
COL4A6-204ENST00000461897 POLR3KQ9Y2Y1 108 aaPredicted RBP10.08□□□□□ -0.8
COL4A6-204ENST00000461897 V9GYV3 84 aa10.08□□□□□ -0.8
COL4A6-204ENST00000461897 UPK2O00526 184 aa10.07□□□□□ -0.8
COL4A6-204ENST00000461897 FSTL3O95633 263 aa10.07□□□□□ -0.8
COL4A6-204ENST00000461897 SNRPCP09234 159 aaKnown RBP10.07□□□□□ -0.8
COL4A6-204ENST00000461897 CCL3L1P16619 93 aa10.07□□□□□ -0.8
COL4A6-204ENST00000461897 RTL8BQ17RB0 113 aa10.07□□□□□ -0.8
COL4A6-204ENST00000461897 HLA-DRB5Q30154 266 aa10.07□□□□□ -0.8
COL4A6-204ENST00000461897 COX19Q49B96 90 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms