RNA–Protein interactions for RNA: ENST00000461187.5

SMPD4-216, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 659 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-216ENST00000461187 RPP25LQ8N5L8 163 aaKnown RBP10.79□□□□□ -0.68
SMPD4-216ENST00000461187 GATAD1Q8WUU5 269 aa10.79□□□□□ -0.68
SMPD4-216ENST00000461187 MRGPRFQ96AM1 343 aa10.79□□□□□ -0.68
SMPD4-216ENST00000461187 GNG7O60262 68 aa10.78□□□□□ -0.68
SMPD4-216ENST00000461187 TOMM20LQ6UXN7 152 aa10.78□□□□□ -0.68
SMPD4-216ENST00000461187 PINX1Q96BK5 328 aaKnown RBP10.78□□□□□ -0.68
SMPD4-216ENST00000461187 CMTM3Q96MX0 182 aa10.78□□□□□ -0.68
SMPD4-216ENST00000461187 RARRES2Q99969 163 aa10.78□□□□□ -0.68
SMPD4-216ENST00000461187 SCPEP1Q9HB40 452 aa10.78□□□□□ -0.68
SMPD4-216ENST00000461187 COMMD3Q9UBI1 195 aa10.78□□□□□ -0.68
SMPD4-216ENST00000461187 DNAH10Q8IVF4 4471 aa10.78□□□□□ -0.68
SMPD4-216ENST00000461187 APOA1P02647 267 aa10.77□□□□□ -0.69
SMPD4-216ENST00000461187 APOHP02749 345 aaPredicted RBP10.77□□□□□ -0.69
SMPD4-216ENST00000461187 RCVRNP35243 200 aa10.77□□□□□ -0.69
SMPD4-216ENST00000461187 ERHP84090 104 aaKnown RBP10.77□□□□□ -0.69
SMPD4-216ENST00000461187 IZUMO4Q1ZYL8 232 aa10.77□□□□□ -0.69
SMPD4-216ENST00000461187 SPINK9Q5DT21 86 aa10.77□□□□□ -0.69
SMPD4-216ENST00000461187 LGALS9CQ6DKI2 356 aa10.77□□□□□ -0.69
SMPD4-216ENST00000461187 TCF24Q7RTU0 167 aa10.77□□□□□ -0.69
SMPD4-216ENST00000461187 SNX29P2Q8IUI4 249 aa10.77□□□□□ -0.69
SMPD4-216ENST00000461187 LILRB2Q8N423 598 aa10.77□□□□□ -0.69
SMPD4-216ENST00000461187 ST8SIA2Q92186 375 aa10.77□□□□□ -0.69
SMPD4-216ENST00000461187 C11orf68Q9H3H3 251 aaKnown RBP10.77□□□□□ -0.69
SMPD4-216ENST00000461187 VSIRQ9H7M9 311 aa10.77□□□□□ -0.69
SMPD4-216ENST00000461187 DNAH6Q9C0G6 4158 aa10.77□□□□□ -0.69
SMPD4-216ENST00000461187 VPS13DQ5THJ4 4388 aa10.76□□□□□ -0.69
SMPD4-216ENST00000461187 SMIM31A0A1B0GVY4 71 aa10.76□□□□□ -0.69
SMPD4-216ENST00000461187 DEDDO75618 318 aa10.76□□□□□ -0.69
SMPD4-216ENST00000461187 CD5P06127 495 aa10.76□□□□□ -0.69
SMPD4-216ENST00000461187 NANOS2P60321 138 aaKnown RBP10.76□□□□□ -0.69
SMPD4-216ENST00000461187 PAFAH1B2P68402 229 aa10.76□□□□□ -0.69
SMPD4-216ENST00000461187 OR11H2Q8NH07 326 aa10.76□□□□□ -0.69
SMPD4-216ENST00000461187 GINS3Q9BRX5 216 aa10.76□□□□□ -0.69
SMPD4-216ENST00000461187 MS4A6AQ9H2W1 248 aa10.76□□□□□ -0.69
SMPD4-216ENST00000461187 ZFAND3Q9H8U3 227 aa10.76□□□□□ -0.69
SMPD4-216ENST00000461187 M0QYG6 137 aa10.75□□□□□ -0.69
SMPD4-216ENST00000461187 ST8SIA3O43173 380 aa10.75□□□□□ -0.69
SMPD4-216ENST00000461187 IGKV1-5P01602 117 aa10.75□□□□□ -0.69
SMPD4-216ENST00000461187 P0C879 139 aa10.75□□□□□ -0.69
SMPD4-216ENST00000461187 ELK1P19419 428 aa10.75□□□□□ -0.69
SMPD4-216ENST00000461187 RND3P61587 244 aa10.75□□□□□ -0.69
SMPD4-216ENST00000461187 PVRIGQ6DKI7 326 aa10.75□□□□□ -0.69
SMPD4-216ENST00000461187 DUSP18Q8NEJ0 188 aa10.75□□□□□ -0.69
SMPD4-216ENST00000461187 C11orf45Q8TAV5 145 aa10.75□□□□□ -0.69
SMPD4-216ENST00000461187 PUS1Q9Y606 427 aaKnown RBP eCLIP10.75□□□□□ -0.69
SMPD4-216ENST00000461187 A0A087WXM4 84 aa10.74□□□□□ -0.69
SMPD4-216ENST00000461187 A0A0B4J293 547 aa10.74□□□□□ -0.69
SMPD4-216ENST00000461187 IGHV3-66A0A0C4DH42 116 aa10.74□□□□□ -0.69
SMPD4-216ENST00000461187 A0A1B0GU03 582 aa10.74□□□□□ -0.69
SMPD4-216ENST00000461187 INS-IGF2F8WCM5 200 aa10.74□□□□□ -0.69
SMPD4-216ENST00000461187 HPGDSO60760 199 aa10.74□□□□□ -0.69
SMPD4-216ENST00000461187 DFFBO76075 338 aa10.74□□□□□ -0.69
SMPD4-216ENST00000461187 TMEM50AO95807 157 aa10.74□□□□□ -0.69
SMPD4-216ENST00000461187 CA1P00915 261 aaPredicted RBP10.74□□□□□ -0.69
SMPD4-216ENST00000461187 PI3P19957 117 aa10.74□□□□□ -0.69
SMPD4-216ENST00000461187 NPBWR1P48145 328 aa10.74□□□□□ -0.69
SMPD4-216ENST00000461187 DEFB131AP59861 70 aa10.74□□□□□ -0.69
SMPD4-216ENST00000461187 NCS1P62166 190 aa10.74□□□□□ -0.69
SMPD4-216ENST00000461187 RBMS2Q15434 407 aaKnown RBP10.74□□□□□ -0.69
SMPD4-216ENST00000461187 ZNF600Q6ZNG1 722 aa10.74□□□□□ -0.69
SMPD4-216ENST00000461187 LHFPL1Q86WI0 220 aa10.74□□□□□ -0.69
SMPD4-216ENST00000461187 FAM24BQ8N5W8 94 aa10.74□□□□□ -0.69
SMPD4-216ENST00000461187 TP53RKQ96S44 253 aa10.74□□□□□ -0.69
SMPD4-216ENST00000461187 MFFQ9GZY8 342 aa10.74□□□□□ -0.69
SMPD4-216ENST00000461187 VCX3AQ9NNX9 186 aa10.74□□□□□ -0.69
SMPD4-216ENST00000461187 FBXL17Q9UF56 701 aa10.74□□□□□ -0.69
SMPD4-216ENST00000461187 TRAV2A0A0B4J234 112 aa10.73□□□□□ -0.69
SMPD4-216ENST00000461187 DNASE2O00115 360 aaPredicted RBP10.73□□□□□ -0.69
SMPD4-216ENST00000461187 DEFB4AO15263 64 aa10.73□□□□□ -0.69
SMPD4-216ENST00000461187 RNASE2P10153 161 aaKnown RBP10.73□□□□□ -0.69
SMPD4-216ENST00000461187 SNCAP37840 140 aa10.73□□□□□ -0.69
SMPD4-216ENST00000461187 VBP1P61758 197 aa10.73□□□□□ -0.69
SMPD4-216ENST00000461187 LEMD1Q68G75 181 aa10.73□□□□□ -0.69
SMPD4-216ENST00000461187 SLC35G3Q8N808 338 aa10.73□□□□□ -0.69
SMPD4-216ENST00000461187 ZNF486Q96H40 463 aaPredicted RBP10.73□□□□□ -0.69
SMPD4-216ENST00000461187 FUNDC2Q9BWH2 189 aa10.73□□□□□ -0.69
SMPD4-216ENST00000461187 IFNA17P01571 189 aa10.72□□□□□ -0.69
SMPD4-216ENST00000461187 PGAM2P15259 253 aa10.72□□□□□ -0.69
SMPD4-216ENST00000461187 PIGPP57054 158 aa10.72□□□□□ -0.69
SMPD4-216ENST00000461187 RPL11P62913 178 aaKnown RBP10.72□□□□□ -0.69
SMPD4-216ENST00000461187 TMEM187Q14656 261 aa10.72□□□□□ -0.69
SMPD4-216ENST00000461187 FNDC4Q9H6D8 234 aaPredicted RBP10.72□□□□□ -0.69
SMPD4-216ENST00000461187 MRPL36Q9P0J6 103 aaKnown RBP10.72□□□□□ -0.69
SMPD4-216ENST00000461187 KLK11Q9UBX7 282 aa10.72□□□□□ -0.69
SMPD4-216ENST00000461187 CORTO00230 105 aa10.71□□□□□ -0.69
SMPD4-216ENST00000461187 TNFAIP8O95379 198 aa10.71□□□□□ -0.69
SMPD4-216ENST00000461187 IFNA4P05014 189 aa10.71□□□□□ -0.69
SMPD4-216ENST00000461187 GIG44P09565 113 aaPredicted RBP10.71□□□□□ -0.69
SMPD4-216ENST00000461187 ETV6P41212 452 aa10.71□□□□□ -0.69
SMPD4-216ENST00000461187 AKR1C2P52895 323 aa10.71□□□□□ -0.69
SMPD4-216ENST00000461187 MLANAQ16655 118 aa10.71□□□□□ -0.69
SMPD4-216ENST00000461187 RNASE12Q5GAN4 147 aaKnown RBP10.71□□□□□ -0.69
SMPD4-216ENST00000461187 TMEM231Q9H6L2 316 aa10.71□□□□□ -0.69
SMPD4-216ENST00000461187 RABAC1Q9UI14 185 aa10.71□□□□□ -0.69
SMPD4-216ENST00000461187 HECTD4Q9Y4D8 3996 aa10.7□□□□□ -0.7
SMPD4-216ENST00000461187 A0A0G2JRQ6 117 aa10.7□□□□□ -0.7
SMPD4-216ENST00000461187 C3orf85A0A1B0GTC6 90 aa10.7□□□□□ -0.7
SMPD4-216ENST00000461187 K7EQG2 157 aa10.7□□□□□ -0.7
SMPD4-216ENST00000461187 CLN5O75503 358 aa10.7□□□□□ -0.7
SMPD4-216ENST00000461187 CD3DP04234 171 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms