RNA–Protein interactions for RNA: ENST00000461115.5

IFT88-204, Transcript of intraflagellar transport 88, humanhuman

TSL 2

Gene IFT88, Length 1,440 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-204ENST00000461115 STPG3Q8N7X2 389 aa8.68□□□□□ -1.02
IFT88-204ENST00000461115 OR1P1Q8NH06 330 aa8.68□□□□□ -1.02
IFT88-204ENST00000461115 C10orf105Q8TEF2 133 aa8.68□□□□□ -1.02
IFT88-204ENST00000461115 TBX15Q96SF7 602 aa8.68□□□□□ -1.02
IFT88-204ENST00000461115 SLC25A22Q9H936 323 aa8.68□□□□□ -1.02
IFT88-204ENST00000461115 GNG13Q9P2W3 67 aa8.68□□□□□ -1.02
IFT88-204ENST00000461115 FLNCQ14315 2725 aa8.68□□□□□ -1.02
IFT88-204ENST00000461115 A0A1B0GV50 99 aa8.67□□□□□ -1.02
IFT88-204ENST00000461115 PSMB11A5LHX3 300 aa8.67□□□□□ -1.02
IFT88-204ENST00000461115 CORTO00230 105 aa8.67□□□□□ -1.02
IFT88-204ENST00000461115 MOSP00540 346 aa8.67□□□□□ -1.02
IFT88-204ENST00000461115 SNRNP70P08621 437 aaKnown RBP8.67□□□□□ -1.02
IFT88-204ENST00000461115 OR13C7P0DN81 318 aa8.67□□□□□ -1.02
IFT88-204ENST00000461115 FGF8P55075 233 aaPredicted RBP8.67□□□□□ -1.02
IFT88-204ENST00000461115 CD81P60033 236 aa8.67□□□□□ -1.02
IFT88-204ENST00000461115 MEF2BQ02080 365 aaPredicted RBP8.67□□□□□ -1.02
IFT88-204ENST00000461115 SRSF1Q07955 248 aaKnown RBP eCLIP8.67□□□□□ -1.02
IFT88-204ENST00000461115 FAM122CQ6P4D5 195 aa8.67□□□□□ -1.02
IFT88-204ENST00000461115 SLC16A13Q7RTY0 426 aa8.67□□□□□ -1.02
IFT88-204ENST00000461115 CYB561D1Q8N8Q1 229 aa8.67□□□□□ -1.02
IFT88-204ENST00000461115 RXFP4Q8TDU9 374 aa8.67□□□□□ -1.02
IFT88-204ENST00000461115 EAF1Q96JC9 268 aaPredicted RBP8.67□□□□□ -1.02
IFT88-204ENST00000461115 FNDC4Q9H6D8 234 aaPredicted RBP8.67□□□□□ -1.02
IFT88-204ENST00000461115 METTL1Q9UBP6 276 aaKnown RBP8.67□□□□□ -1.02
IFT88-204ENST00000461115 ARL2-SNX15V9GYD0 113 aa8.67□□□□□ -1.02
IFT88-204ENST00000461115 MYO18BQ8IUG5 2567 aa8.66□□□□□ -1.02
IFT88-204ENST00000461115 A0A087WWC5 75 aa8.66□□□□□ -1.02
IFT88-204ENST00000461115 C7orf77A4D0Y5 90 aa8.66□□□□□ -1.02
IFT88-204ENST00000461115 NBR2O15453 112 aa8.66□□□□□ -1.02
IFT88-204ENST00000461115 MFAP2P55001 183 aa8.66□□□□□ -1.02
IFT88-204ENST00000461115 RHOBP62745 196 aa8.66□□□□□ -1.02
IFT88-204ENST00000461115 PRB3Q04118 309 aaPredicted RBP8.66□□□□□ -1.02
IFT88-204ENST00000461115 PAX8Q06710 450 aa8.66□□□□□ -1.02
IFT88-204ENST00000461115 KLRD1Q13241 179 aa8.66□□□□□ -1.02
IFT88-204ENST00000461115 AWAT1Q58HT5 328 aa8.66□□□□□ -1.02
IFT88-204ENST00000461115 GCSAMLQ5JQS6 135 aa8.66□□□□□ -1.02
IFT88-204ENST00000461115 ETFRF1Q6IPR1 90 aa8.66□□□□□ -1.02
IFT88-204ENST00000461115 LHFPL4Q7Z7J7 247 aa8.66□□□□□ -1.02
IFT88-204ENST00000461115 TMEM116Q8NCL8 245 aa8.66□□□□□ -1.02
IFT88-204ENST00000461115 OR2T10Q8NGZ9 312 aa8.66□□□□□ -1.02
IFT88-204ENST00000461115 MALSU1Q96EH3 234 aa8.66□□□□□ -1.02
IFT88-204ENST00000461115 CCL19Q99731 98 aa8.66□□□□□ -1.02
IFT88-204ENST00000461115 ZNF462Q96JM2 2506 aa8.66□□□□□ -1.02
IFT88-204ENST00000461115 ABCA1O95477 2261 aa8.66□□□□□ -1.02
IFT88-204ENST00000461115 IGKV1D-37A0A075B6S9 117 aa8.65□□□□□ -1.02
IFT88-204ENST00000461115 LOC100996750A0A140TA64 210 aa8.65□□□□□ -1.02
IFT88-204ENST00000461115 ZFP92A6NM28 416 aa8.65□□□□□ -1.02
IFT88-204ENST00000461115 B4DEV8 164 aa8.65□□□□□ -1.02
IFT88-204ENST00000461115 TOX4O94842 621 aa8.65□□□□□ -1.02
IFT88-204ENST00000461115 FBP1P09467 338 aa8.65□□□□□ -1.02
IFT88-204ENST00000461115 OR5G3P0C626 314 aa8.65□□□□□ -1.02
IFT88-204ENST00000461115 SELENOTP62341 195 aa8.65□□□□□ -1.02
IFT88-204ENST00000461115 PNRC1Q12796 327 aaPredicted RBP8.65□□□□□ -1.02
IFT88-204ENST00000461115 TNXAQ16473 311 aa8.65□□□□□ -1.02
IFT88-204ENST00000461115 KLK9Q2XQG4 91 aa8.65□□□□□ -1.02
IFT88-204ENST00000461115 DYNAPQ8N1N2 210 aa8.65□□□□□ -1.02
IFT88-204ENST00000461115 SRSF12Q8WXF0 261 aaKnown RBP8.65□□□□□ -1.02
IFT88-204ENST00000461115 FAM168AQ92567 244 aa8.65□□□□□ -1.02
IFT88-204ENST00000461115 PIMREGQ9BSJ6 248 aa8.65□□□□□ -1.02
IFT88-204ENST00000461115 KRTAP4-6Q9BYQ5 205 aa8.65□□□□□ -1.02
IFT88-204ENST00000461115 FBXL15Q9H469 300 aa8.65□□□□□ -1.02
IFT88-204ENST00000461115 LPAR2Q9HBW0 351 aa8.65□□□□□ -1.02
IFT88-204ENST00000461115 SMCO4Q9NRQ5 59 aa8.65□□□□□ -1.02
IFT88-204ENST00000461115 KLK9Q9UKQ9 250 aa8.65□□□□□ -1.02
IFT88-204ENST00000461115 F11RQ9Y624 299 aaKnown RBP8.65□□□□□ -1.02
IFT88-204ENST00000461115 EPG5Q9HCE0 2579 aa8.64□□□□□ -1.03
IFT88-204ENST00000461115 A0A1W2PPV4 95 aa8.64□□□□□ -1.03
IFT88-204ENST00000461115 H3BQ15 152 aa8.64□□□□□ -1.03
IFT88-204ENST00000461115 ACTL6BO94805 426 aa8.64□□□□□ -1.03
IFT88-204ENST00000461115 CXorf1O96002 111 aa8.64□□□□□ -1.03
IFT88-204ENST00000461115 PRB1P04280 392 aa8.64□□□□□ -1.03
IFT88-204ENST00000461115 OR10J1P30954 320 aa8.64□□□□□ -1.03
IFT88-204ENST00000461115 DSCR9P59020 149 aa8.64□□□□□ -1.03
IFT88-204ENST00000461115 LCN2P80188 198 aa8.64□□□□□ -1.03
IFT88-204ENST00000461115 MLANAQ16655 118 aa8.64□□□□□ -1.03
IFT88-204ENST00000461115 C5orf64Q2M2E5 130 aa8.64□□□□□ -1.03
IFT88-204ENST00000461115 OR1L6Q8NGR2 347 aa8.64□□□□□ -1.03
IFT88-204ENST00000461115 NANPQ8TBE9 248 aa8.64□□□□□ -1.03
IFT88-204ENST00000461115 GATAD1Q8WUU5 269 aa8.64□□□□□ -1.03
IFT88-204ENST00000461115 SSMEM1Q8WWF3 244 aa8.64□□□□□ -1.03
IFT88-204ENST00000461115 RNF2Q99496 336 aa8.64□□□□□ -1.03
IFT88-204ENST00000461115 TMPRSS5Q9H3S3 457 aa8.64□□□□□ -1.03
IFT88-204ENST00000461115 SEPSECSQ9HD40 501 aaKnown RBP8.64□□□□□ -1.03
IFT88-204ENST00000461115 FUT9Q9Y231 359 aa8.64□□□□□ -1.03
IFT88-204ENST00000461115 SPG11Q96JI7 2443 aa8.64□□□□□ -1.03
IFT88-204ENST00000461115 UBR5O95071 2799 aaPredicted RBP8.64□□□□□ -1.03
IFT88-204ENST00000461115 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.64□□□□□ -1.03
IFT88-204ENST00000461115 TCRBV4S1A1TA0A5B7 111 aa8.63□□□□□ -1.03
IFT88-204ENST00000461115 COLCA2A8K830 154 aa8.63□□□□□ -1.03
IFT88-204ENST00000461115 FCN1O00602 326 aa8.63□□□□□ -1.03
IFT88-204ENST00000461115 AREGP15514 252 aa8.63□□□□□ -1.03
IFT88-204ENST00000461115 CTRB1P17538 263 aa8.63□□□□□ -1.03
IFT88-204ENST00000461115 PLP1P60201 277 aa8.63□□□□□ -1.03
IFT88-204ENST00000461115 HNF4GQ14541 408 aa8.63□□□□□ -1.03
IFT88-204ENST00000461115 SSX2Q16385 188 aa8.63□□□□□ -1.03
IFT88-204ENST00000461115 CTRB2Q6GPI1 263 aa8.63□□□□□ -1.03
IFT88-204ENST00000461115 ZNF562Q6V9R5 426 aa8.63□□□□□ -1.03
IFT88-204ENST00000461115 SPNS3Q6ZMD2 512 aa8.63□□□□□ -1.03
IFT88-204ENST00000461115 CYP2G1PQ6ZSU1 146 aa8.63□□□□□ -1.03
IFT88-204ENST00000461115 CBLN2Q8IUK8 224 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms