RNA–Protein interactions for RNA: ENST00000460431.1

SMARCD3-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-204ENST00000460431 INPP1P49441 399 aa12.47□□□□□ -0.41
SMARCD3-204ENST00000460431 CD69Q07108 199 aa12.47□□□□□ -0.41
SMARCD3-204ENST00000460431 PVRIGQ6DKI7 326 aa12.47□□□□□ -0.41
SMARCD3-204ENST00000460431 TMED4Q7Z7H5 227 aa12.47□□□□□ -0.41
SMARCD3-204ENST00000460431 LGI3Q8N145 548 aa12.47□□□□□ -0.41
SMARCD3-204ENST00000460431 OR2K2Q8NGT1 345 aa12.47□□□□□ -0.41
SMARCD3-204ENST00000460431 ZNF436Q9C0F3 470 aaPredicted RBP12.47□□□□□ -0.41
SMARCD3-204ENST00000460431 SHPKQ9UHJ6 478 aa12.47□□□□□ -0.41
SMARCD3-204ENST00000460431 SMAD5-AS1Q9Y6J3 95 aa12.47□□□□□ -0.41
SMARCD3-204ENST00000460431 TMEM213A2RRL7 107 aa12.46□□□□□ -0.41
SMARCD3-204ENST00000460431 MT-CO2P00403 227 aa12.46□□□□□ -0.41
SMARCD3-204ENST00000460431 EDN2P20800 178 aa12.46□□□□□ -0.41
SMARCD3-204ENST00000460431 CBLN1P23435 193 aa12.46□□□□□ -0.41
SMARCD3-204ENST00000460431 FCGR2BP31994 310 aaPredicted RBP12.46□□□□□ -0.41
SMARCD3-204ENST00000460431 HOXA1P49639 335 aaPredicted RBP12.46□□□□□ -0.41
SMARCD3-204ENST00000460431 SUB1P53999 127 aaKnown RBP eCLIP12.46□□□□□ -0.41
SMARCD3-204ENST00000460431 SRPXP78539 464 aa12.46□□□□□ -0.41
SMARCD3-204ENST00000460431 RBMS2Q15434 407 aaKnown RBP12.46□□□□□ -0.41
SMARCD3-204ENST00000460431 DEFB114Q30KQ6 69 aa12.46□□□□□ -0.41
SMARCD3-204ENST00000460431 NMSQ5H8A3 153 aa12.46□□□□□ -0.41
SMARCD3-204ENST00000460431 LCN12Q6JVE5 192 aa12.46□□□□□ -0.41
SMARCD3-204ENST00000460431 UNQ9165/PRO28630Q6UXU0 137 aa12.46□□□□□ -0.41
SMARCD3-204ENST00000460431 LYZL2Q7Z4W2 148 aa12.46□□□□□ -0.41
SMARCD3-204ENST00000460431 TXN2Q99757 166 aa12.46□□□□□ -0.41
SMARCD3-204ENST00000460431 CHRDL1Q9BU40 450 aa12.46□□□□□ -0.41
SMARCD3-204ENST00000460431 ENY2Q9NPA8 101 aa12.46□□□□□ -0.41
SMARCD3-204ENST00000460431 GAR1Q9NY12 217 aaKnown RBP12.46□□□□□ -0.41
SMARCD3-204ENST00000460431 CACFD1Q9UGQ2 172 aa12.46□□□□□ -0.41
SMARCD3-204ENST00000460431 DNAH9Q9NYC9 4486 aa12.46□□□□□ -0.41
SMARCD3-204ENST00000460431 PIGBOS1A0A0B4J2F0 54 aa12.45□□□□□ -0.42
SMARCD3-204ENST00000460431 IGHV3-35A0A0C4DH35 117 aa12.45□□□□□ -0.42
SMARCD3-204ENST00000460431 IZUMO1RA6ND01 250 aa12.45□□□□□ -0.42
SMARCD3-204ENST00000460431 A6NHS1 94 aa12.45□□□□□ -0.42
SMARCD3-204ENST00000460431 CTSGP08311 255 aa12.45□□□□□ -0.42
SMARCD3-204ENST00000460431 SULT1A3P0DMM9 295 aa12.45□□□□□ -0.42
SMARCD3-204ENST00000460431 SULT1A4P0DMN0 295 aa12.45□□□□□ -0.42
SMARCD3-204ENST00000460431 RNASE2P10153 161 aaKnown RBP12.45□□□□□ -0.42
SMARCD3-204ENST00000460431 IL7P13232 177 aa12.45□□□□□ -0.42
SMARCD3-204ENST00000460431 ADMP35318 185 aa12.45□□□□□ -0.42
SMARCD3-204ENST00000460431 CCR6P51684 374 aa12.45□□□□□ -0.42
SMARCD3-204ENST00000460431 MFAP4P55083 255 aa12.45□□□□□ -0.42
SMARCD3-204ENST00000460431 ELLP55199 621 aaPredicted RBP12.45□□□□□ -0.42
SMARCD3-204ENST00000460431 BSXQ3C1V8 233 aa12.45□□□□□ -0.42
SMARCD3-204ENST00000460431 CD300EQ496F6 205 aaPredicted RBP12.45□□□□□ -0.42
SMARCD3-204ENST00000460431 Q56UQ5 140 aa12.45□□□□□ -0.42
SMARCD3-204ENST00000460431 Q8N1Y9 231 aa12.45□□□□□ -0.42
SMARCD3-204ENST00000460431 UBAC2Q8NBM4 344 aa12.45□□□□□ -0.42
SMARCD3-204ENST00000460431 PALMDQ9NP74 551 aa12.45□□□□□ -0.42
SMARCD3-204ENST00000460431 TECRQ9NZ01 308 aaKnown RBP12.45□□□□□ -0.42
SMARCD3-204ENST00000460431 C8orf88P0DMB2 117 aa12.44□□□□□ -0.42
SMARCD3-204ENST00000460431 TM4SF20Q53R12 229 aa12.44□□□□□ -0.42
SMARCD3-204ENST00000460431 LINC00299Q6ZSB3 139 aa12.44□□□□□ -0.42
SMARCD3-204ENST00000460431 CENPSQ8N2Z9 138 aa12.44□□□□□ -0.42
SMARCD3-204ENST00000460431 LRTM2Q8N967 370 aa12.44□□□□□ -0.42
SMARCD3-204ENST00000460431 DYNLRB2Q8TF09 96 aa12.44□□□□□ -0.42
SMARCD3-204ENST00000460431 PINX1Q96BK5 328 aaKnown RBP12.44□□□□□ -0.42
SMARCD3-204ENST00000460431 C7orf50Q9BRJ6 194 aaKnown RBP12.44□□□□□ -0.42
SMARCD3-204ENST00000460431 LINC00854A0A1B0GVQ3 168 aa12.43□□□□□ -0.42
SMARCD3-204ENST00000460431 DUXBA0A1W2PPF3 345 aa12.43□□□□□ -0.42
SMARCD3-204ENST00000460431 CENPXA8MT69 81 aa12.43□□□□□ -0.42
SMARCD3-204ENST00000460431 CORTO00230 105 aa12.43□□□□□ -0.42
SMARCD3-204ENST00000460431 NDUFA4O00483 81 aa12.43□□□□□ -0.42
SMARCD3-204ENST00000460431 NDUFB6O95139 128 aa12.43□□□□□ -0.42
SMARCD3-204ENST00000460431 SFT2D2O95562 160 aa12.43□□□□□ -0.42
SMARCD3-204ENST00000460431 IGHV3-48P01763 117 aa12.43□□□□□ -0.42
SMARCD3-204ENST00000460431 VAMP1P23763 118 aa12.43□□□□□ -0.42
SMARCD3-204ENST00000460431 UBE2MP61081 183 aaKnown RBP12.43□□□□□ -0.42
SMARCD3-204ENST00000460431 PPP1R1AQ13522 171 aa12.43□□□□□ -0.42
SMARCD3-204ENST00000460431 SMCO1Q147U7 214 aa12.43□□□□□ -0.42
SMARCD3-204ENST00000460431 ANKRD55Q3KP44 614 aa12.43□□□□□ -0.42
SMARCD3-204ENST00000460431 UXS1Q8NBZ7 420 aa12.43□□□□□ -0.42
SMARCD3-204ENST00000460431 CACNG8Q8WXS5 425 aa12.43□□□□□ -0.42
SMARCD3-204ENST00000460431 TMEM190Q8WZ59 177 aa12.43□□□□□ -0.42
SMARCD3-204ENST00000460431 MARC2Q969Z3 335 aa12.43□□□□□ -0.42
SMARCD3-204ENST00000460431 UFC1Q9Y3C8 167 aa12.43□□□□□ -0.42
SMARCD3-204ENST00000460431 A0A1B0GU03 582 aa12.42□□□□□ -0.42
SMARCD3-204ENST00000460431 ZNF785A8K8V0 405 aa12.42□□□□□ -0.42
SMARCD3-204ENST00000460431 NUPL2O15504 423 aaKnown RBP12.42□□□□□ -0.42
SMARCD3-204ENST00000460431 BTCP35070 178 aa12.42□□□□□ -0.42
SMARCD3-204ENST00000460431 HTR2BP41595 481 aa12.42□□□□□ -0.42
SMARCD3-204ENST00000460431 ZNF414Q96IQ9 312 aa12.42□□□□□ -0.42
SMARCD3-204ENST00000460431 HEYLQ9NQ87 328 aaPredicted RBP12.42□□□□□ -0.42
SMARCD3-204ENST00000460431 MRPL27Q9P0M9 148 aaKnown RBP12.42□□□□□ -0.42
SMARCD3-204ENST00000460431 HSPB7Q9UBY9 170 aa12.42□□□□□ -0.42
SMARCD3-204ENST00000460431 MLXQ9UH92 298 aa12.42□□□□□ -0.42
SMARCD3-204ENST00000460431 CEBPZOSA8MTT3 80 aa12.41□□□□□ -0.42
SMARCD3-204ENST00000460431 NHLRC4P0CG21 123 aaPredicted RBP12.41□□□□□ -0.42
SMARCD3-204ENST00000460431 RELQ04864 619 aaPredicted RBP12.41□□□□□ -0.42
SMARCD3-204ENST00000460431 TNFRSF9Q07011 255 aa12.41□□□□□ -0.42
SMARCD3-204ENST00000460431 CNPY1Q3B7I2 92 aa12.41□□□□□ -0.42
SMARCD3-204ENST00000460431 C2orf83Q53S99 150 aa12.41□□□□□ -0.42
SMARCD3-204ENST00000460431 DUSP18Q8NEJ0 188 aa12.41□□□□□ -0.42
SMARCD3-204ENST00000460431 FNDC4Q9H6D8 234 aaPredicted RBP12.41□□□□□ -0.42
SMARCD3-204ENST00000460431 DAZ1Q9NQZ3 744 aaKnown RBP12.41□□□□□ -0.42
SMARCD3-204ENST00000460431 NBEAL2Q6ZNJ1 2754 aa12.41□□□□□ -0.42
SMARCD3-204ENST00000460431 A8MZ25 164 aa12.4□□□□□ -0.42
SMARCD3-204ENST00000460431 K7EMT4 169 aa12.4□□□□□ -0.42
SMARCD3-204ENST00000460431 PLA2G10O15496 165 aa12.4□□□□□ -0.42
SMARCD3-204ENST00000460431 GNG7O60262 68 aa12.4□□□□□ -0.42
SMARCD3-204ENST00000460431 PITX3O75364 302 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms