RNA–Protein interactions for RNA: ENST00000460235.1

HDAC4-206, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 343 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-206ENST00000460235 GPX4P36969 197 aaPredicted RBP9.66□□□□□ -0.86
HDAC4-206ENST00000460235 RHOGP84095 191 aa9.66□□□□□ -0.86
HDAC4-206ENST00000460235 CD83Q01151 205 aa9.66□□□□□ -0.86
HDAC4-206ENST00000460235 BSXQ3C1V8 233 aa9.66□□□□□ -0.86
HDAC4-206ENST00000460235 ASPHD1Q5U4P2 390 aa9.66□□□□□ -0.86
HDAC4-206ENST00000460235 INO80EQ8NBZ0 244 aaPredicted RBP9.66□□□□□ -0.86
HDAC4-206ENST00000460235 OR10P1Q8NGE3 313 aa9.66□□□□□ -0.86
HDAC4-206ENST00000460235 EEF1AKMT3Q96AZ1 226 aa9.66□□□□□ -0.86
HDAC4-206ENST00000460235 MISP3Q96FF7 219 aa9.66□□□□□ -0.86
HDAC4-206ENST00000460235 TXN2Q99757 166 aa9.66□□□□□ -0.86
HDAC4-206ENST00000460235 TSSC4Q9Y5U2 329 aaPredicted RBP9.66□□□□□ -0.86
HDAC4-206ENST00000460235 hCG_2014768A0A024R1R8 64 aa9.65□□□□□ -0.86
HDAC4-206ENST00000460235 IGLV11-55A0A075B6I3 123 aa9.65□□□□□ -0.86
HDAC4-206ENST00000460235 TRBV9A0A0B4J1U6 114 aa9.65□□□□□ -0.86
HDAC4-206ENST00000460235 A0A1B0GW64 132 aa9.65□□□□□ -0.86
HDAC4-206ENST00000460235 FABP1P07148 127 aa9.65□□□□□ -0.86
HDAC4-206ENST00000460235 OPRK1P41145 380 aa9.65□□□□□ -0.86
HDAC4-206ENST00000460235 CDX1P47902 265 aaPredicted RBP9.65□□□□□ -0.86
HDAC4-206ENST00000460235 NPBWR1P48145 328 aa9.65□□□□□ -0.86
HDAC4-206ENST00000460235 SRSF2Q01130 221 aaKnown RBP9.65□□□□□ -0.86
HDAC4-206ENST00000460235 BAXQ07812 192 aa9.65□□□□□ -0.86
HDAC4-206ENST00000460235 KHDC1LQ5JSQ8 128 aa9.65□□□□□ -0.86
HDAC4-206ENST00000460235 C11orf87Q6NUJ2 197 aa9.65□□□□□ -0.86
HDAC4-206ENST00000460235 ETV3LQ6ZN32 361 aa9.65□□□□□ -0.86
HDAC4-206ENST00000460235 MS4A10Q96PG2 267 aa9.65□□□□□ -0.86
HDAC4-206ENST00000460235 GGACTQ9BVM4 153 aa9.65□□□□□ -0.86
HDAC4-206ENST00000460235 LYRM2Q9NU23 88 aaPredicted RBP9.65□□□□□ -0.86
HDAC4-206ENST00000460235 PLXNB1O43157 2135 aa9.65□□□□□ -0.86
HDAC4-206ENST00000460235 TRAV30A0A087WSZ9 112 aa9.64□□□□□ -0.87
HDAC4-206ENST00000460235 NUDT19A8MXV4 375 aa9.64□□□□□ -0.87
HDAC4-206ENST00000460235 OR2J3O76001 311 aa9.64□□□□□ -0.87
HDAC4-206ENST00000460235 S100A11P31949 105 aa9.64□□□□□ -0.87
HDAC4-206ENST00000460235 MFAP4P55083 255 aa9.64□□□□□ -0.87
HDAC4-206ENST00000460235 ATP6V1FQ16864 119 aa9.64□□□□□ -0.87
HDAC4-206ENST00000460235 C15orf32Q32M92 178 aa9.64□□□□□ -0.87
HDAC4-206ENST00000460235 PVRIGQ6DKI7 326 aa9.64□□□□□ -0.87
HDAC4-206ENST00000460235 SHISA2Q6UWI4 295 aa9.64□□□□□ -0.87
HDAC4-206ENST00000460235 NDUFA11Q86Y39 141 aa9.64□□□□□ -0.87
HDAC4-206ENST00000460235 SLC35E1Q96K37 410 aa9.64□□□□□ -0.87
HDAC4-206ENST00000460235 NIPBLQ6KC79 2804 aaeCLIP9.63□□□□□ -0.87
HDAC4-206ENST00000460235 FNDC10F2Z333 226 aa9.63□□□□□ -0.87
HDAC4-206ENST00000460235 SULT1A1P50225 295 aa9.63□□□□□ -0.87
HDAC4-206ENST00000460235 RAB31Q13636 194 aa9.63□□□□□ -0.87
HDAC4-206ENST00000460235 SPSB3Q6PJ21 355 aa9.63□□□□□ -0.87
HDAC4-206ENST00000460235 TMEM14EPQ6UXP3 125 aa9.63□□□□□ -0.87
HDAC4-206ENST00000460235 ZNF546Q86UE3 836 aa9.63□□□□□ -0.87
HDAC4-206ENST00000460235 TCTE3Q8IZS6 198 aa9.63□□□□□ -0.87
HDAC4-206ENST00000460235 ZNF491Q8N8L2 437 aa9.63□□□□□ -0.87
HDAC4-206ENST00000460235 WIPF2Q8TF74 440 aaPredicted RBP9.63□□□□□ -0.87
HDAC4-206ENST00000460235 FANCD2OSQ96PS1 177 aa9.63□□□□□ -0.87
HDAC4-206ENST00000460235 ZNF747Q9BV97 191 aa9.63□□□□□ -0.87
HDAC4-206ENST00000460235 C21orf62Q9NYP8 219 aa9.63□□□□□ -0.87
HDAC4-206ENST00000460235 MBD2Q9UBB5 411 aa9.63□□□□□ -0.87
HDAC4-206ENST00000460235 SETD2Q9BYW2 2564 aaPredicted RBP9.62□□□□□ -0.87
HDAC4-206ENST00000460235 C15orf62A8K5M9 175 aa9.62□□□□□ -0.87
HDAC4-206ENST00000460235 H3BP45 60 aa9.62□□□□□ -0.87
HDAC4-206ENST00000460235 SOX15O60248 233 aa9.62□□□□□ -0.87
HDAC4-206ENST00000460235 PFDN1O60925 122 aa9.62□□□□□ -0.87
HDAC4-206ENST00000460235 DFFBO76075 338 aa9.62□□□□□ -0.87
HDAC4-206ENST00000460235 MT-CO2P00403 227 aa9.62□□□□□ -0.87
HDAC4-206ENST00000460235 RPLP1P05386 114 aaKnown RBP9.62□□□□□ -0.87
HDAC4-206ENST00000460235 LYL1P12980 280 aa9.62□□□□□ -0.87
HDAC4-206ENST00000460235 FCGR2BP31994 310 aaPredicted RBP9.62□□□□□ -0.87
HDAC4-206ENST00000460235 AP2S1P53680 142 aaPredicted RBP9.62□□□□□ -0.87
HDAC4-206ENST00000460235 DLK1P80370 383 aa9.62□□□□□ -0.87
HDAC4-206ENST00000460235 CD69Q07108 199 aa9.62□□□□□ -0.87
HDAC4-206ENST00000460235 KRTAP21-3Q3LHN1 58 aa9.62□□□□□ -0.87
HDAC4-206ENST00000460235 ACSM6Q6P461 480 aa9.62□□□□□ -0.87
HDAC4-206ENST00000460235 LILRB2Q8N423 598 aa9.62□□□□□ -0.87
HDAC4-206ENST00000460235 TMEM252Q8N6L7 170 aa9.62□□□□□ -0.87
HDAC4-206ENST00000460235 OR1S2Q8NGQ3 325 aa9.62□□□□□ -0.87
HDAC4-206ENST00000460235 MYOZ3Q8TDC0 251 aa9.62□□□□□ -0.87
HDAC4-206ENST00000460235 C4orf3Q8WVX3 66 aa9.62□□□□□ -0.87
HDAC4-206ENST00000460235 DPF1Q92782 380 aa9.62□□□□□ -0.87
HDAC4-206ENST00000460235 WDR89Q96FK6 387 aaPredicted RBP9.62□□□□□ -0.87
HDAC4-206ENST00000460235 RANGRFQ9HD47 186 aaPredicted RBP9.62□□□□□ -0.87
HDAC4-206ENST00000460235 ANK3Q12955 4377 aaKnown RBP9.61□□□□□ -0.87
HDAC4-206ENST00000460235 FXYD6-FXYD2A0A087WZ82 144 aa9.61□□□□□ -0.87
HDAC4-206ENST00000460235 NUPL2O15504 423 aaKnown RBP9.61□□□□□ -0.87
HDAC4-206ENST00000460235 GNG7O60262 68 aa9.61□□□□□ -0.87
HDAC4-206ENST00000460235 PRH1P02810 166 aa9.61□□□□□ -0.87
HDAC4-206ENST00000460235 LGALS1P09382 135 aaKnown RBP9.61□□□□□ -0.87
HDAC4-206ENST00000460235 METTL15P1P0C7V9 234 aa9.61□□□□□ -0.87
HDAC4-206ENST00000460235 C4BPBP20851 252 aa9.61□□□□□ -0.87
HDAC4-206ENST00000460235 ZP3P21754 424 aa9.61□□□□□ -0.87
HDAC4-206ENST00000460235 RPL12P30050 165 aaKnown RBP9.61□□□□□ -0.87
HDAC4-206ENST00000460235 S100A7P31151 101 aa9.61□□□□□ -0.87
HDAC4-206ENST00000460235 PAX9P55771 341 aa9.61□□□□□ -0.87
HDAC4-206ENST00000460235 RUNX1Q01196 453 aa9.61□□□□□ -0.87
HDAC4-206ENST00000460235 Q56UQ5 140 aa9.61□□□□□ -0.87
HDAC4-206ENST00000460235 OR8G2PQ6IF36 304 aa9.61□□□□□ -0.87
HDAC4-206ENST00000460235 ZNF343Q6P1L6 599 aa9.61□□□□□ -0.87
HDAC4-206ENST00000460235 OR4F17Q8NGA8 305 aa9.61□□□□□ -0.87
HDAC4-206ENST00000460235 OR4X1Q8NH49 305 aa9.61□□□□□ -0.87
HDAC4-206ENST00000460235 SCARB1Q8WTV0 552 aa9.61□□□□□ -0.87
HDAC4-206ENST00000460235 BSCL2Q96G97 398 aaPredicted RBP9.61□□□□□ -0.87
HDAC4-206ENST00000460235 HYLS1Q96M11 299 aa9.61□□□□□ -0.87
HDAC4-206ENST00000460235 OR4F4Q96R69 305 aa9.61□□□□□ -0.87
HDAC4-206ENST00000460235 RNF126Q9BV68 326 aa9.61□□□□□ -0.87
HDAC4-206ENST00000460235 KLK15Q9H2R5 256 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms