RNA–Protein interactions for RNA: ENST00000459963.5

NCSTN-209, Transcript of nicastrin, human

TSL 5

Gene NCSTN, Length 1,246 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCSTN-209	ENST00000459963	TPRA1	Q86W33	373 aa		5.25	□□□□□ -1.57
NCSTN-209	ENST00000459963	CADM3	Q8N126	398 aa		5.25	□□□□□ -1.57
NCSTN-209	ENST00000459963	SYS1	Q8N2H4	156 aa		5.25	□□□□□ -1.57
NCSTN-209	ENST00000459963	ZNF709	Q8N972	641 aa		5.25	□□□□□ -1.57
NCSTN-209	ENST00000459963	SETD6	Q8TBK2	473 aa		5.25	□□□□□ -1.57
NCSTN-209	ENST00000459963	GPR148	Q8TDV2	347 aa		5.25	□□□□□ -1.57
NCSTN-209	ENST00000459963	APH1B	Q8WW43	257 aa		5.25	□□□□□ -1.57
NCSTN-209	ENST00000459963	GINS3	Q9BRX5	216 aa		5.25	□□□□□ -1.57
NCSTN-209	ENST00000459963	OR51E2	Q9H255	320 aa		5.25	□□□□□ -1.57
NCSTN-209	ENST00000459963	TMEM138	Q9NPI0	162 aa		5.25	□□□□□ -1.57
NCSTN-209	ENST00000459963	C11orf21	Q9P2W6	132 aa		5.25	□□□□□ -1.57
NCSTN-209	ENST00000459963	CLEC2D	Q9UHP7	191 aa		5.25	□□□□□ -1.57
NCSTN-209	ENST00000459963	LY96	Q9Y6Y9	160 aa		5.25	□□□□□ -1.57
NCSTN-209	ENST00000459963	HLA-DRB4	X5D2U9	266 aa		5.25	□□□□□ -1.57
NCSTN-209	ENST00000459963	KRTAP23-1	A1A580	65 aa		5.24	□□□□□ -1.57
NCSTN-209	ENST00000459963	ZNF701	M0R085	212 aa	Predicted RBP	5.24	□□□□□ -1.57
NCSTN-209	ENST00000459963	KBTBD11	O94819	623 aa		5.24	□□□□□ -1.57
NCSTN-209	ENST00000459963	NAPSA	O96009	420 aa		5.24	□□□□□ -1.57
NCSTN-209	ENST00000459963	CD2	P06729	351 aa		5.24	□□□□□ -1.57
NCSTN-209	ENST00000459963	FCGR1A	P12314	374 aa		5.24	□□□□□ -1.57
NCSTN-209	ENST00000459963	MGMT	P16455	207 aa		5.24	□□□□□ -1.57
NCSTN-209	ENST00000459963	GAGE13	Q4V321	117 aa		5.24	□□□□□ -1.57
NCSTN-209	ENST00000459963	MEDAG	Q5VYS4	303 aa		5.24	□□□□□ -1.57
NCSTN-209	ENST00000459963	LRTM2	Q8N967	370 aa		5.24	□□□□□ -1.57
NCSTN-209	ENST00000459963	HSD17B11	Q8NBQ5	300 aa		5.24	□□□□□ -1.57
NCSTN-209	ENST00000459963	OR6M1	Q8NGM8	313 aa		5.24	□□□□□ -1.57
NCSTN-209	ENST00000459963	TRUB1	Q8WWH5	349 aa	Known RBP	5.24	□□□□□ -1.57
NCSTN-209	ENST00000459963	MRPL48	Q96GC5	212 aa	Known RBP	5.24	□□□□□ -1.57
NCSTN-209	ENST00000459963	C5orf30	Q96GV9	206 aa		5.24	□□□□□ -1.57
NCSTN-209	ENST00000459963		Q96MT0	163 aa		5.24	□□□□□ -1.57
NCSTN-209	ENST00000459963	TMEM231	Q9H6L2	316 aa		5.24	□□□□□ -1.57
NCSTN-209	ENST00000459963	ORC6	Q9Y5N6	252 aa		5.24	□□□□□ -1.57
NCSTN-209	ENST00000459963		A0A096LPF7	62 aa		5.23	□□□□□ -1.57
NCSTN-209	ENST00000459963	CGB1	A6NKQ9	187 aa		5.23	□□□□□ -1.57
NCSTN-209	ENST00000459963	CYB5B	O43169	146 aa		5.23	□□□□□ -1.57
NCSTN-209	ENST00000459963	IGKV3-20	P01619	116 aa		5.23	□□□□□ -1.57
NCSTN-209	ENST00000459963	PRM2	P04554	102 aa		5.23	□□□□□ -1.57
NCSTN-209	ENST00000459963	KRTAP10-8	P60410	259 aa		5.23	□□□□□ -1.57
NCSTN-209	ENST00000459963	RPS11	P62280	158 aa	Known RBP eCLIP	5.23	□□□□□ -1.57
NCSTN-209	ENST00000459963	ARFRP1	Q13795	201 aa		5.23	□□□□□ -1.57
NCSTN-209	ENST00000459963	GPR176	Q14439	515 aa		5.23	□□□□□ -1.57
NCSTN-209	ENST00000459963	INSL4	Q14641	139 aa		5.23	□□□□□ -1.57
NCSTN-209	ENST00000459963	C6orf201	Q7Z4U5	140 aa		5.23	□□□□□ -1.57
NCSTN-209	ENST00000459963	VKORC1L1	Q8N0U8	176 aa		5.23	□□□□□ -1.57
NCSTN-209	ENST00000459963	VSTM2A	Q8TAG5	236 aa		5.23	□□□□□ -1.57
NCSTN-209	ENST00000459963	PPP1R14B	Q96C90	147 aa		5.23	□□□□□ -1.57
NCSTN-209	ENST00000459963	CLUHP3	Q96NS8	147 aa		5.23	□□□□□ -1.57
NCSTN-209	ENST00000459963	SLC29A1	Q99808	456 aa		5.23	□□□□□ -1.57
NCSTN-209	ENST00000459963	HDHD3	Q9BSH5	251 aa	Predicted RBP	5.23	□□□□□ -1.57
NCSTN-209	ENST00000459963	FAAP24	Q9BTP7	215 aa		5.23	□□□□□ -1.57
NCSTN-209	ENST00000459963	OR2D2	Q9H210	308 aa		5.23	□□□□□ -1.57
NCSTN-209	ENST00000459963	TRBV5-5	A0A0J9YX44	114 aa		5.22	□□□□□ -1.57
NCSTN-209	ENST00000459963		A0A0J9YXV3	536 aa		5.22	□□□□□ -1.57
NCSTN-209	ENST00000459963		A0A1W2PS18	150 aa		5.22	□□□□□ -1.57
NCSTN-209	ENST00000459963	PLAC8L1	A1L4L8	177 aa		5.22	□□□□□ -1.57
NCSTN-209	ENST00000459963	SNTN	A6NMZ2	147 aa		5.22	□□□□□ -1.57
NCSTN-209	ENST00000459963	ZNF705G	A8MUZ8	300 aa	Predicted RBP	5.22	□□□□□ -1.57
NCSTN-209	ENST00000459963		M0QYG6	137 aa		5.22	□□□□□ -1.57
NCSTN-209	ENST00000459963	PDCD6	O75340	191 aa		5.22	□□□□□ -1.57
NCSTN-209	ENST00000459963	WBP4	O75554	376 aa	Known RBP	5.22	□□□□□ -1.57
NCSTN-209	ENST00000459963	CIB2	O75838	187 aa		5.22	□□□□□ -1.57
NCSTN-209	ENST00000459963	DHRS2	Q13268	280 aa		5.22	□□□□□ -1.57
NCSTN-209	ENST00000459963	KCTD21	Q4G0X4	260 aa		5.22	□□□□□ -1.57
NCSTN-209	ENST00000459963	SLC25A24	Q6NUK1	477 aa		5.22	□□□□□ -1.57
NCSTN-209	ENST00000459963	RPL22L1	Q6P5R6	122 aa	Known RBP	5.22	□□□□□ -1.57
NCSTN-209	ENST00000459963	ZNF880	Q6PDB4	577 aa		5.22	□□□□□ -1.57
NCSTN-209	ENST00000459963	TMED4	Q7Z7H5	227 aa		5.22	□□□□□ -1.57
NCSTN-209	ENST00000459963	RHOXF1	Q8NHV9	184 aa		5.22	□□□□□ -1.57
NCSTN-209	ENST00000459963	TMEM167A	Q8TBQ9	72 aa		5.22	□□□□□ -1.57
NCSTN-209	ENST00000459963	SMIM19	Q96E16	107 aa		5.22	□□□□□ -1.57
NCSTN-209	ENST00000459963	ADTRP	Q96IZ2	230 aa		5.22	□□□□□ -1.57
NCSTN-209	ENST00000459963	LINC00467	Q9BRT7	94 aa		5.22	□□□□□ -1.57
NCSTN-209	ENST00000459963	DCUN1D5	Q9BTE7	237 aa		5.22	□□□□□ -1.57
NCSTN-209	ENST00000459963	TMEM208	Q9BTX3	173 aa		5.22	□□□□□ -1.57
NCSTN-209	ENST00000459963	NXF2	Q9GZY0	626 aa	Known RBP	5.22	□□□□□ -1.57
NCSTN-209	ENST00000459963	CHMP1A	Q9HD42	196 aa	Predicted RBP	5.22	□□□□□ -1.57
NCSTN-209	ENST00000459963	RDH8	Q9NYR8	311 aa		5.22	□□□□□ -1.57
NCSTN-209	ENST00000459963		A0A0A6YYD4	124 aa		5.21	□□□□□ -1.58
NCSTN-209	ENST00000459963	LOC100130705	A0A1B0GUX0	176 aa		5.21	□□□□□ -1.58
NCSTN-209	ENST00000459963	IGLC7	A0M8Q6	106 aa		5.21	□□□□□ -1.58
NCSTN-209	ENST00000459963	RAB27B	O00194	218 aa		5.21	□□□□□ -1.58
NCSTN-209	ENST00000459963	MFNG	O00587	321 aa		5.21	□□□□□ -1.58
NCSTN-209	ENST00000459963	OGG1	O15527	345 aa		5.21	□□□□□ -1.58
NCSTN-209	ENST00000459963	DENR	O43583	198 aa	Known RBP	5.21	□□□□□ -1.58
NCSTN-209	ENST00000459963	FCER2	P06734	321 aa		5.21	□□□□□ -1.58
NCSTN-209	ENST00000459963	CD3G	P09693	182 aa		5.21	□□□□□ -1.58
NCSTN-209	ENST00000459963	EVI2A	P22794	236 aa		5.21	□□□□□ -1.58
NCSTN-209	ENST00000459963	CRHBP	P24387	322 aa		5.21	□□□□□ -1.58
NCSTN-209	ENST00000459963	TSPO	P30536	169 aa		5.21	□□□□□ -1.58
NCSTN-209	ENST00000459963	DUT	P33316	252 aa	Known RBP	5.21	□□□□□ -1.58
NCSTN-209	ENST00000459963	SNRPD3	P62318	126 aa	Known RBP	5.21	□□□□□ -1.58
NCSTN-209	ENST00000459963	MRPL28	Q13084	256 aa	Known RBP	5.21	□□□□□ -1.58
NCSTN-209	ENST00000459963		Q499Y3	187 aa		5.21	□□□□□ -1.58
NCSTN-209	ENST00000459963	GDF5OS	Q5U4N7	250 aa		5.21	□□□□□ -1.58
NCSTN-209	ENST00000459963	TOMM20L	Q6UXN7	152 aa		5.21	□□□□□ -1.58
NCSTN-209	ENST00000459963	PUSL1	Q8N0Z8	303 aa	Known RBP	5.21	□□□□□ -1.58
NCSTN-209	ENST00000459963	OR10J6P	Q8NGY7	276 aa		5.21	□□□□□ -1.58
NCSTN-209	ENST00000459963	PGLYRP3	Q96LB9	341 aa		5.21	□□□□□ -1.58
NCSTN-209	ENST00000459963	GPHA2	Q96T91	129 aa		5.21	□□□□□ -1.58
NCSTN-209	ENST00000459963	SLC35B3	Q9H1N7	401 aa		5.21	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms