RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 OCC1Q8TAD7 63 aa7.21□□□□□ -1.26
HDAC3-202ENST00000459727 CMTM2Q8TAZ6 248 aa7.21□□□□□ -1.26
HDAC3-202ENST00000459727 LEAP2Q969E1 77 aa7.21□□□□□ -1.26
HDAC3-202ENST00000459727 SRSF8Q9BRL6 282 aaKnown RBP7.21□□□□□ -1.26
HDAC3-202ENST00000459727 DERL1Q9BUN8 251 aa7.21□□□□□ -1.26
HDAC3-202ENST00000459727 MRPL20Q9BYC9 149 aaKnown RBP7.21□□□□□ -1.26
HDAC3-202ENST00000459727 DNAJC4Q9NNZ3 241 aa7.21□□□□□ -1.26
HDAC3-202ENST00000459727 TMEM106BQ9NUM4 274 aa7.21□□□□□ -1.26
HDAC3-202ENST00000459727 CDC42EP3Q9UKI2 254 aa7.21□□□□□ -1.26
HDAC3-202ENST00000459727 AMMECR1Q9Y4X0 333 aaPredicted RBP7.21□□□□□ -1.26
HDAC3-202ENST00000459727 TRBV20OR9-2A0A075B6H5 130 aa7.2□□□□□ -1.26
HDAC3-202ENST00000459727 TCRBV4S1A1TA0A5B7 111 aa7.2□□□□□ -1.26
HDAC3-202ENST00000459727 IGKV1-16P04430 117 aa7.2□□□□□ -1.26
HDAC3-202ENST00000459727 SELLP14151 372 aa7.2□□□□□ -1.26
HDAC3-202ENST00000459727 CRISP2P16562 243 aa7.2□□□□□ -1.26
HDAC3-202ENST00000459727 PPOXP50336 477 aa7.2□□□□□ -1.26
HDAC3-202ENST00000459727 PRRX1P54821 245 aa7.2□□□□□ -1.26
HDAC3-202ENST00000459727 LGALS4P56470 323 aa7.2□□□□□ -1.26
HDAC3-202ENST00000459727 SSTP61278 116 aa7.2□□□□□ -1.26
HDAC3-202ENST00000459727 UBE2L3P68036 154 aaKnown RBP7.2□□□□□ -1.26
HDAC3-202ENST00000459727 HOXA4Q00056 320 aaPredicted RBP7.2□□□□□ -1.26
HDAC3-202ENST00000459727 OR10J3Q5JRS4 329 aa7.2□□□□□ -1.26
HDAC3-202ENST00000459727 FAM162BQ5T6X4 162 aa7.2□□□□□ -1.26
HDAC3-202ENST00000459727 CYB5R2Q6BCY4 276 aa7.2□□□□□ -1.26
HDAC3-202ENST00000459727 FAM231DQ6ZW35 169 aa7.2□□□□□ -1.26
HDAC3-202ENST00000459727 MIR17HGQ75NE6 70 aa7.2□□□□□ -1.26
HDAC3-202ENST00000459727 S100A7AQ86SG5 101 aa7.2□□□□□ -1.26
HDAC3-202ENST00000459727 TGIF2LXQ8IUE1 241 aa7.2□□□□□ -1.26
HDAC3-202ENST00000459727 MMD2Q8IY49 270 aa7.2□□□□□ -1.26
HDAC3-202ENST00000459727 OR1L6Q8NGR2 347 aa7.2□□□□□ -1.26
HDAC3-202ENST00000459727 PERPQ96FX8 193 aa7.2□□□□□ -1.26
HDAC3-202ENST00000459727 C1orf159Q96HA4 380 aa7.2□□□□□ -1.26
HDAC3-202ENST00000459727 SLC25A33Q9BSK2 321 aa7.2□□□□□ -1.26
HDAC3-202ENST00000459727 DYNLRB1Q9NP97 96 aa7.2□□□□□ -1.26
HDAC3-202ENST00000459727 ZNF835Q9Y2P0 537 aa7.2□□□□□ -1.26
HDAC3-202ENST00000459727 ITPR1Q14643 2758 aa7.2□□□□□ -1.26
HDAC3-202ENST00000459727 PTPRBP23467 1997 aa7.2□□□□□ -1.26
HDAC3-202ENST00000459727 DSPP15924 2871 aaKnown RBP7.2□□□□□ -1.26
HDAC3-202ENST00000459727 LOC400499M0QZD8 3231 aa7.2□□□□□ -1.26
HDAC3-202ENST00000459727 A0A0G2JNJ9 132 aa7.19□□□□□ -1.26
HDAC3-202ENST00000459727 B9A039 149 aa7.19□□□□□ -1.26
HDAC3-202ENST00000459727 FCN1O00602 326 aa7.19□□□□□ -1.26
HDAC3-202ENST00000459727 ACTL6BO94805 426 aa7.19□□□□□ -1.26
HDAC3-202ENST00000459727 IGHV3-7P01780 117 aa7.19□□□□□ -1.26
HDAC3-202ENST00000459727 DEFA4P12838 97 aa7.19□□□□□ -1.26
HDAC3-202ENST00000459727 TDGF1P3P51864 188 aa7.19□□□□□ -1.26
HDAC3-202ENST00000459727 CX3CL1P78423 397 aa7.19□□□□□ -1.26
HDAC3-202ENST00000459727 CCL8P80075 99 aa7.19□□□□□ -1.26
HDAC3-202ENST00000459727 BSPH1Q075Z2 132 aa7.19□□□□□ -1.26
HDAC3-202ENST00000459727 TMEM155Q4W5P6 130 aa7.19□□□□□ -1.26
HDAC3-202ENST00000459727 SPRNQ5BIV9 151 aa7.19□□□□□ -1.26
HDAC3-202ENST00000459727 C9orf152Q5JTZ5 239 aa7.19□□□□□ -1.26
HDAC3-202ENST00000459727 FAM201AQ5SY85 155 aa7.19□□□□□ -1.26
HDAC3-202ENST00000459727 C10orf113Q5VZT2 155 aa7.19□□□□□ -1.26
HDAC3-202ENST00000459727 TMEM200BQ69YZ2 307 aa7.19□□□□□ -1.26
HDAC3-202ENST00000459727 GFRALQ6UXV0 394 aa7.19□□□□□ -1.26
HDAC3-202ENST00000459727 DOLPP1Q86YN1 238 aa7.19□□□□□ -1.26
HDAC3-202ENST00000459727 MS4A10Q96PG2 267 aa7.19□□□□□ -1.26
HDAC3-202ENST00000459727 TRGV9Q99603 122 aa7.19□□□□□ -1.26
HDAC3-202ENST00000459727 RNF5Q99942 180 aa7.19□□□□□ -1.26
HDAC3-202ENST00000459727 NDUFAF3Q9BU61 184 aa7.19□□□□□ -1.26
HDAC3-202ENST00000459727 MRPL18Q9H0U6 180 aaKnown RBP7.19□□□□□ -1.26
HDAC3-202ENST00000459727 Q9UFV3 132 aa7.19□□□□□ -1.26
HDAC3-202ENST00000459727 RNF24Q9Y225 148 aa7.19□□□□□ -1.26
HDAC3-202ENST00000459727 SOX21Q9Y651 276 aaPredicted RBP7.19□□□□□ -1.26
HDAC3-202ENST00000459727 V9GYV3 84 aa7.19□□□□□ -1.26
HDAC3-202ENST00000459727 HELZ2Q9BYK8 2649 aaKnown RBP7.18□□□□□ -1.26
HDAC3-202ENST00000459727 UNC79Q9P2D8 2635 aa7.18□□□□□ -1.26
HDAC3-202ENST00000459727 DPRXA6NFQ7 191 aa7.18□□□□□ -1.26
HDAC3-202ENST00000459727 SRRM4A7MD48 611 aaKnown RBP7.18□□□□□ -1.26
HDAC3-202ENST00000459727 A8MWP6 167 aa7.18□□□□□ -1.26
HDAC3-202ENST00000459727 TNFRSF13BO14836 293 aaPredicted RBP7.18□□□□□ -1.26
HDAC3-202ENST00000459727 AMY1AP04745 511 aa7.18□□□□□ -1.26
HDAC3-202ENST00000459727 CHRNB4P30926 498 aa7.18□□□□□ -1.26
HDAC3-202ENST00000459727 CA7P43166 264 aa7.18□□□□□ -1.26
HDAC3-202ENST00000459727 CASP6P55212 293 aa7.18□□□□□ -1.26
HDAC3-202ENST00000459727 SPATA31B1PQ5VZV4 182 aa7.18□□□□□ -1.26
HDAC3-202ENST00000459727 PVRIGQ6DKI7 326 aa7.18□□□□□ -1.26
HDAC3-202ENST00000459727 C1orf229Q6ZS94 237 aaPredicted RBP7.18□□□□□ -1.26
HDAC3-202ENST00000459727 RPRMLQ8N4K4 120 aa7.18□□□□□ -1.26
HDAC3-202ENST00000459727 LINC00469Q8N7U9 141 aa7.18□□□□□ -1.26
HDAC3-202ENST00000459727 WIPF2Q8TF74 440 aaPredicted RBP7.18□□□□□ -1.26
HDAC3-202ENST00000459727 H1FXQ92522 213 aaKnown RBP7.18□□□□□ -1.26
HDAC3-202ENST00000459727 RND1Q92730 232 aa7.18□□□□□ -1.26
HDAC3-202ENST00000459727 ST6GALNAC6Q969X2 333 aa7.18□□□□□ -1.26
HDAC3-202ENST00000459727 C14orf144Q96I85 54 aa7.18□□□□□ -1.26
HDAC3-202ENST00000459727 C2orf88Q9BSF0 95 aa7.18□□□□□ -1.26
HDAC3-202ENST00000459727 PAXXQ9BUH6 204 aa7.18□□□□□ -1.26
HDAC3-202ENST00000459727 CNTRLQ7Z7A1 2325 aa7.18□□□□□ -1.26
HDAC3-202ENST00000459727 SMIM27A0A1W2PRY6 76 aa7.17□□□□□ -1.26
HDAC3-202ENST00000459727 ZNF705GA8MUZ8 300 aaPredicted RBP7.17□□□□□ -1.26
HDAC3-202ENST00000459727 SNURFLB1AK76 121 aa7.17□□□□□ -1.26
HDAC3-202ENST00000459727 K7EN84 100 aa7.17□□□□□ -1.26
HDAC3-202ENST00000459727 M0QZK8 103 aa7.17□□□□□ -1.26
HDAC3-202ENST00000459727 MMP23AO75900 390 aa7.17□□□□□ -1.26
HDAC3-202ENST00000459727 IGHV1-8P0DP01 117 aa7.17□□□□□ -1.26
HDAC3-202ENST00000459727 HIST1H1EP10412 219 aaKnown RBP7.17□□□□□ -1.26
HDAC3-202ENST00000459727 CRYBB3P26998 211 aa7.17□□□□□ -1.26
HDAC3-202ENST00000459727 APOBEC3AP31941 199 aaPredicted RBP7.17□□□□□ -1.26
HDAC3-202ENST00000459727 BRS3P32247 399 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms