RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 SCO2A0A1W2PP80 73 aa13.46□□□□□ -0.26
CCDC43-202ENST00000457422 GGCTO75223 188 aaKnown RBP13.46□□□□□ -0.26
CCDC43-202ENST00000457422 ACTL6BO94805 426 aa13.46□□□□□ -0.26
CCDC43-202ENST00000457422 PRB3Q04118 309 aaPredicted RBP13.46□□□□□ -0.26
CCDC43-202ENST00000457422 MRGPRG-AS1Q2M3A8 158 aa13.46□□□□□ -0.26
CCDC43-202ENST00000457422 OR5T1Q8NG75 326 aa13.46□□□□□ -0.26
CCDC43-202ENST00000457422 C8orf46Q8TAG6 207 aa13.46□□□□□ -0.26
CCDC43-202ENST00000457422 RITA1Q96K30 269 aa13.46□□□□□ -0.26
CCDC43-202ENST00000457422 TPSG1Q9NRR2 321 aa13.46□□□□□ -0.26
CCDC43-202ENST00000457422 TMEM167BQ9NRX6 74 aa13.46□□□□□ -0.26
CCDC43-202ENST00000457422 TRBV20OR9-2A0A075B6H5 130 aa13.45□□□□□ -0.26
CCDC43-202ENST00000457422 IGHV3-72A0A0B4J1Y9 119 aa13.45□□□□□ -0.26
CCDC43-202ENST00000457422 PPP1R2P9O14990 202 aa13.45□□□□□ -0.26
CCDC43-202ENST00000457422 SUB1P53999 127 aaKnown RBP eCLIP13.45□□□□□ -0.26
CCDC43-202ENST00000457422 PRRX1P54821 245 aa13.45□□□□□ -0.26
CCDC43-202ENST00000457422 BEND2Q8NDZ0 799 aa13.45□□□□□ -0.26
CCDC43-202ENST00000457422 ELOVL1Q9BW60 279 aa13.45□□□□□ -0.26
CCDC43-202ENST00000457422 TECRQ9NZ01 308 aaKnown RBP13.45□□□□□ -0.26
CCDC43-202ENST00000457422 SLC25A17O43808 307 aa13.44□□□□□ -0.26
CCDC43-202ENST00000457422 GATA2P23769 480 aaPredicted RBP13.44□□□□□ -0.26
CCDC43-202ENST00000457422 S100A12P80511 92 aa13.44□□□□□ -0.26
CCDC43-202ENST00000457422 PQLC2Q6ZP29 291 aa13.44□□□□□ -0.26
CCDC43-202ENST00000457422 TEX45Q8NA69 505 aa13.44□□□□□ -0.26
CCDC43-202ENST00000457422 IMMP2LQ96T52 175 aa13.44□□□□□ -0.26
CCDC43-202ENST00000457422 ELOA3CA0A087WX78 387 aaPredicted RBP13.44□□□□□ -0.26
CCDC43-202ENST00000457422 IFITM10A6NMD0 228 aa13.44□□□□□ -0.26
CCDC43-202ENST00000457422 ENSAO43768 121 aaKnown RBP13.44□□□□□ -0.26
CCDC43-202ENST00000457422 TYMSP04818 313 aa13.44□□□□□ -0.26
CCDC43-202ENST00000457422 ZNF114Q8NC26 417 aa13.44□□□□□ -0.26
CCDC43-202ENST00000457422 CLEC7AQ9BXN2 247 aa13.44□□□□□ -0.26
CCDC43-202ENST00000457422 PSMB11A5LHX3 300 aa13.43□□□□□ -0.26
CCDC43-202ENST00000457422 PPP5D1E7EU14 171 aa13.43□□□□□ -0.26
CCDC43-202ENST00000457422 FAM3BP58499 235 aaPredicted RBP13.43□□□□□ -0.26
CCDC43-202ENST00000457422 TAS2R45P59539 299 aa13.43□□□□□ -0.26
CCDC43-202ENST00000457422 KCNIP4Q6PIL6 250 aa13.43□□□□□ -0.26
CCDC43-202ENST00000457422 OR2T10Q8NGZ9 312 aa13.43□□□□□ -0.26
CCDC43-202ENST00000457422 OR2T6Q8NHC8 308 aa13.43□□□□□ -0.26
CCDC43-202ENST00000457422 ZNF503Q96F45 646 aa13.43□□□□□ -0.26
CCDC43-202ENST00000457422 UHRF2Q96PU4 802 aa13.43□□□□□ -0.26
CCDC43-202ENST00000457422 MRPL32Q9BYC8 188 aaKnown RBP13.43□□□□□ -0.26
CCDC43-202ENST00000457422 AURKAIP1Q9NWT8 199 aaPredicted RBP13.43□□□□□ -0.26
CCDC43-202ENST00000457422 MALRD1Q5VYJ5 2156 aa13.43□□□□□ -0.26
CCDC43-202ENST00000457422 ATRXP46100 2492 aa13.43□□□□□ -0.26
CCDC43-202ENST00000457422 PPIAL4CA0A0B4J2A2 164 aa13.43□□□□□ -0.26
CCDC43-202ENST00000457422 A0A1W2PPI3 338 aa13.43□□□□□ -0.26
CCDC43-202ENST00000457422 C9JCJ5 164 aa13.43□□□□□ -0.26
CCDC43-202ENST00000457422 BUB1B-PAK6H3BSN5 160 aa13.43□□□□□ -0.26
CCDC43-202ENST00000457422 CRYGBP07316 175 aa13.43□□□□□ -0.26
CCDC43-202ENST00000457422 PPIAL4GP0DN37 164 aa13.43□□□□□ -0.26
CCDC43-202ENST00000457422 LCN2P80188 198 aa13.43□□□□□ -0.26
CCDC43-202ENST00000457422 PSG5Q15238 335 aa13.43□□□□□ -0.26
CCDC43-202ENST00000457422 PVRIGQ6DKI7 326 aa13.43□□□□□ -0.26
CCDC43-202ENST00000457422 ACY3Q96HD9 319 aa13.43□□□□□ -0.26
CCDC43-202ENST00000457422 RNF2Q99496 336 aa13.43□□□□□ -0.26
CCDC43-202ENST00000457422 FNDC4Q9H6D8 234 aaPredicted RBP13.43□□□□□ -0.26
CCDC43-202ENST00000457422 LY96Q9Y6Y9 160 aa13.43□□□□□ -0.26
CCDC43-202ENST00000457422 A0A1W2PPQ1 181 aa13.42□□□□□ -0.26
CCDC43-202ENST00000457422 PGPEP1LA6NFU8 196 aa13.42□□□□□ -0.26
CCDC43-202ENST00000457422 C1QTNF9P0C862 333 aa13.42□□□□□ -0.26
CCDC43-202ENST00000457422 MMD2Q8IY49 270 aa13.42□□□□□ -0.26
CCDC43-202ENST00000457422 THAP8Q8NA92 274 aa13.42□□□□□ -0.26
CCDC43-202ENST00000457422 OR4X1Q8NH49 305 aa13.42□□□□□ -0.26
CCDC43-202ENST00000457422 SFRP2Q96HF1 295 aa13.42□□□□□ -0.26
CCDC43-202ENST00000457422 SLC25A33Q9BSK2 321 aa13.42□□□□□ -0.26
CCDC43-202ENST00000457422 MIOXQ9UGB7 285 aa13.42□□□□□ -0.26
CCDC43-202ENST00000457422 NAV3Q8IVL0 2385 aa13.42□□□□□ -0.26
CCDC43-202ENST00000457422 ZZEF1O43149 2961 aa13.41□□□□□ -0.26
CCDC43-202ENST00000457422 IGHV1-3A0A0C4DH29 117 aa13.41□□□□□ -0.26
CCDC43-202ENST00000457422 PRSS8Q16651 343 aa13.41□□□□□ -0.26
CCDC43-202ENST00000457422 CLEC12BQ2HXU8 276 aa13.41□□□□□ -0.26
CCDC43-202ENST00000457422 MRPL41Q8IXM3 137 aaKnown RBP13.41□□□□□ -0.26
CCDC43-202ENST00000457422 OR8B3Q8NGG8 313 aa13.41□□□□□ -0.26
CCDC43-202ENST00000457422 TMEM37Q8WXS4 190 aa13.41□□□□□ -0.26
CCDC43-202ENST00000457422 BTF3L4Q96K17 158 aa13.41□□□□□ -0.26
CCDC43-202ENST00000457422 OR8B2Q96RD0 313 aa13.41□□□□□ -0.26
CCDC43-202ENST00000457422 RELNP78509 3460 aa13.41□□□□□ -0.26
CCDC43-202ENST00000457422 MDFIC2A0A1B0GVS7 189 aa13.41□□□□□ -0.26
CCDC43-202ENST00000457422 LY6HO94772 140 aa13.41□□□□□ -0.26
CCDC43-202ENST00000457422 C8orf88P0DMB2 117 aa13.41□□□□□ -0.26
CCDC43-202ENST00000457422 COX7A1P24310 79 aa13.41□□□□□ -0.26
CCDC43-202ENST00000457422 SSBP2P81877 361 aaPredicted RBP13.41□□□□□ -0.26
CCDC43-202ENST00000457422 C4orf17Q53FE4 359 aa13.41□□□□□ -0.26
CCDC43-202ENST00000457422 HIST3H2BBQ8N257 126 aa13.41□□□□□ -0.26
CCDC43-202ENST00000457422 LY6G5BQ8NDX9 201 aa13.41□□□□□ -0.26
CCDC43-202ENST00000457422 RAB1BQ9H0U4 201 aa13.41□□□□□ -0.26
CCDC43-202ENST00000457422 GAR1Q9NY12 217 aaKnown RBP13.41□□□□□ -0.26
CCDC43-202ENST00000457422 AMMECR1Q9Y4X0 333 aaPredicted RBP13.41□□□□□ -0.26
CCDC43-202ENST00000457422 TPRP12270 2363 aaKnown RBP13.41□□□□□ -0.26
CCDC43-202ENST00000457422 IGLC7A0M8Q6 106 aa13.4□□□□□ -0.26
CCDC43-202ENST00000457422 REG1AP05451 166 aa13.4□□□□□ -0.26
CCDC43-202ENST00000457422 CNTFRP26992 372 aa13.4□□□□□ -0.26
CCDC43-202ENST00000457422 FOXL1Q12952 345 aa13.4□□□□□ -0.26
CCDC43-202ENST00000457422 INSIG2Q9Y5U4 225 aa13.4□□□□□ -0.26
CCDC43-202ENST00000457422 SPTBN4Q9H254 2564 aa13.4□□□□□ -0.26
CCDC43-202ENST00000457422 IGKV1D-37A0A075B6S9 117 aa13.4□□□□□ -0.27
CCDC43-202ENST00000457422 TCRBV4S1A1TA0A5B7 111 aa13.4□□□□□ -0.27
CCDC43-202ENST00000457422 SOD3P08294 240 aa13.4□□□□□ -0.27
CCDC43-202ENST00000457422 OCC1Q8TAD7 63 aa13.4□□□□□ -0.27
CCDC43-202ENST00000457422 DNAJC4Q9NNZ3 241 aa13.4□□□□□ -0.27
CCDC43-202ENST00000457422 CBLN4Q9NTU7 201 aa13.4□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms