RNA–Protein interactions for RNA: ENST00000457109.5

PKP4-207, Transcript of plakophilin 4, humanhuman

TSL 3

Gene PKP4, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-207ENST00000457109 NPPCP23582 126 aa6.53□□□□□ -1.36
PKP4-207ENST00000457109 EIF2B2P49770 351 aaKnown RBP6.53□□□□□ -1.36
PKP4-207ENST00000457109 AKR1C2P52895 323 aa6.53□□□□□ -1.36
PKP4-207ENST00000457109 MFAP2P55001 183 aa6.53□□□□□ -1.36
PKP4-207ENST00000457109 UCP3P55916 312 aa6.53□□□□□ -1.36
PKP4-207ENST00000457109 PRCDQ00LT1 54 aa6.53□□□□□ -1.36
PKP4-207ENST00000457109 RBMS2Q15434 407 aaKnown RBP6.53□□□□□ -1.36
PKP4-207ENST00000457109 ODF3L2Q3SX64 289 aa6.53□□□□□ -1.36
PKP4-207ENST00000457109 TCF24Q7RTU0 167 aa6.53□□□□□ -1.36
PKP4-207ENST00000457109 LYSMD2Q8IV50 215 aa6.53□□□□□ -1.36
PKP4-207ENST00000457109 OR11H2Q8NH07 326 aa6.53□□□□□ -1.36
PKP4-207ENST00000457109 C11orf45Q8TAV5 145 aa6.53□□□□□ -1.36
PKP4-207ENST00000457109 C15orf40Q8WUR7 153 aa6.53□□□□□ -1.36
PKP4-207ENST00000457109 PHLDA1Q8WV24 401 aaPredicted RBP6.53□□□□□ -1.36
PKP4-207ENST00000457109 RRNAD1Q96FB5 475 aaKnown RBP6.53□□□□□ -1.36
PKP4-207ENST00000457109 NXF2Q9GZY0 626 aaKnown RBP6.53□□□□□ -1.36
PKP4-207ENST00000457109 IGHV3OR16-13A0A075B7E8 117 aa6.52□□□□□ -1.37
PKP4-207ENST00000457109 IGHV3-74A0A0B4J1X5 117 aa6.52□□□□□ -1.37
PKP4-207ENST00000457109 I3L2K1 104 aa6.52□□□□□ -1.37
PKP4-207ENST00000457109 TNFAIP8O95379 198 aa6.52□□□□□ -1.37
PKP4-207ENST00000457109 IGHV3-48P01763 117 aa6.52□□□□□ -1.37
PKP4-207ENST00000457109 FCGR2BP31994 310 aaPredicted RBP6.52□□□□□ -1.37
PKP4-207ENST00000457109 RORCP51449 518 aa6.52□□□□□ -1.37
PKP4-207ENST00000457109 TMEM187Q14656 261 aa6.52□□□□□ -1.37
PKP4-207ENST00000457109 TRIM16LQ309B1 348 aa6.52□□□□□ -1.37
PKP4-207ENST00000457109 RNASE10Q5GAN6 216 aaKnown RBP6.52□□□□□ -1.37
PKP4-207ENST00000457109 ZNF600Q6ZNG1 722 aa6.52□□□□□ -1.37
PKP4-207ENST00000457109 STHQ8IWL8 128 aa6.52□□□□□ -1.37
PKP4-207ENST00000457109 CCDC71LQ8N9Z2 235 aa6.52□□□□□ -1.37
PKP4-207ENST00000457109 ZFAND1Q8TCF1 268 aa6.52□□□□□ -1.37
PKP4-207ENST00000457109 GPX8Q8TED1 209 aa6.52□□□□□ -1.37
PKP4-207ENST00000457109 AP3S1Q92572 193 aa6.52□□□□□ -1.37
PKP4-207ENST00000457109 TMEM230Q96A57 120 aa6.52□□□□□ -1.37
PKP4-207ENST00000457109 MRGPRFQ96AM1 343 aa6.52□□□□□ -1.37
PKP4-207ENST00000457109 ZNF486Q96H40 463 aaPredicted RBP6.52□□□□□ -1.37
PKP4-207ENST00000457109 GRAMD2BQ96HH9 432 aa6.52□□□□□ -1.37
PKP4-207ENST00000457109 SEC22AQ96IW7 307 aa6.52□□□□□ -1.37
PKP4-207ENST00000457109 OR10C1Q96KK4 312 aa6.52□□□□□ -1.37
PKP4-207ENST00000457109 FXYD6Q9H0Q3 95 aa6.52□□□□□ -1.37
PKP4-207ENST00000457109 COPZ2Q9P299 210 aa6.52□□□□□ -1.37
PKP4-207ENST00000457109 FBXL17Q9UF56 701 aa6.52□□□□□ -1.37
PKP4-207ENST00000457109 RABAC1Q9UI14 185 aa6.52□□□□□ -1.37
PKP4-207ENST00000457109 ANAPC10Q9UM13 185 aa6.52□□□□□ -1.37
PKP4-207ENST00000457109 CA1P00915 261 aaPredicted RBP6.51□□□□□ -1.37
PKP4-207ENST00000457109 TGFBR1P36897 503 aa6.51□□□□□ -1.37
PKP4-207ENST00000457109 HOXA1P49639 335 aaPredicted RBP6.51□□□□□ -1.37
PKP4-207ENST00000457109 PIGPP57054 158 aa6.51□□□□□ -1.37
PKP4-207ENST00000457109 TOMM20LQ6UXN7 152 aa6.51□□□□□ -1.37
PKP4-207ENST00000457109 ZNF114Q8NC26 417 aa6.51□□□□□ -1.37
PKP4-207ENST00000457109 YIPF6Q96EC8 236 aa6.51□□□□□ -1.37
PKP4-207ENST00000457109 METTL26Q96S19 204 aa6.51□□□□□ -1.37
PKP4-207ENST00000457109 PUS1Q9Y606 427 aaKnown RBP eCLIP6.51□□□□□ -1.37
PKP4-207ENST00000457109 DNAH7Q8WXX0 4024 aa6.5□□□□□ -1.37
PKP4-207ENST00000457109 TRAV30A0A087WSZ9 112 aa6.5□□□□□ -1.37
PKP4-207ENST00000457109 C3orf85A0A1B0GTC6 90 aa6.5□□□□□ -1.37
PKP4-207ENST00000457109 RPS10-NUDT3A0A1W2PQS6 291 aa6.5□□□□□ -1.37
PKP4-207ENST00000457109 DBX1A6NMT0 343 aa6.5□□□□□ -1.37
PKP4-207ENST00000457109 F8W735 103 aaPredicted RBP6.5□□□□□ -1.37
PKP4-207ENST00000457109 M0QYG6 137 aa6.5□□□□□ -1.37
PKP4-207ENST00000457109 B3GALNT1O75752 331 aa6.5□□□□□ -1.37
PKP4-207ENST00000457109 TMEM50AO95807 157 aa6.5□□□□□ -1.37
PKP4-207ENST00000457109 TBPP20226 339 aa6.5□□□□□ -1.37
PKP4-207ENST00000457109 OPRK1P41145 380 aa6.5□□□□□ -1.37
PKP4-207ENST00000457109 TCTAP57738 103 aa6.5□□□□□ -1.37
PKP4-207ENST00000457109 DEFB131AP59861 70 aa6.5□□□□□ -1.37
PKP4-207ENST00000457109 TMEM41BQ5BJD5 291 aa6.5□□□□□ -1.37
PKP4-207ENST00000457109 SPINK9Q5DT21 86 aa6.5□□□□□ -1.37
PKP4-207ENST00000457109 LGALS9CQ6DKI2 356 aa6.5□□□□□ -1.37
PKP4-207ENST00000457109 C2CD4CQ8TF44 421 aa6.5□□□□□ -1.37
PKP4-207ENST00000457109 MS4A6AQ9H2W1 248 aa6.5□□□□□ -1.37
PKP4-207ENST00000457109 RYR2Q92736 4967 aa6.49□□□□□ -1.37
PKP4-207ENST00000457109 TRAV2A0A0B4J234 112 aa6.49□□□□□ -1.37
PKP4-207ENST00000457109 IGHV3-66A0A0C4DH42 116 aa6.49□□□□□ -1.37
PKP4-207ENST00000457109 HPGDSO60760 199 aa6.49□□□□□ -1.37
PKP4-207ENST00000457109 ELK1P19419 428 aa6.49□□□□□ -1.37
PKP4-207ENST00000457109 ETV6P41212 452 aa6.49□□□□□ -1.37
PKP4-207ENST00000457109 AP2S1P53680 142 aaPredicted RBP6.49□□□□□ -1.37
PKP4-207ENST00000457109 NANOS2P60321 138 aaKnown RBP6.49□□□□□ -1.37
PKP4-207ENST00000457109 RND3P61587 244 aa6.49□□□□□ -1.37
PKP4-207ENST00000457109 VBP1P61758 197 aa6.49□□□□□ -1.37
PKP4-207ENST00000457109 EWSR1Q01844 656 aaKnown RBP eCLIP6.49□□□□□ -1.373e-7■■□□□ 13
PKP4-207ENST00000457109 ZNF124Q15973 351 aa6.49□□□□□ -1.37
PKP4-207ENST00000457109 SCGB2B2Q4G0G5 96 aa6.49□□□□□ -1.37
PKP4-207ENST00000457109 RNASE12Q5GAN4 147 aaKnown RBP6.49□□□□□ -1.37
PKP4-207ENST00000457109 FAM90A2PQ658T7 463 aa6.49□□□□□ -1.37
PKP4-207ENST00000457109 MORN3Q6PF18 240 aaPredicted RBP6.49□□□□□ -1.37
PKP4-207ENST00000457109 NOXA1Q86UR1 476 aa6.49□□□□□ -1.37
PKP4-207ENST00000457109 ARRDC1Q8N5I2 433 aa6.49□□□□□ -1.37
PKP4-207ENST00000457109 STXBP6Q8NFX7 210 aa6.49□□□□□ -1.37
PKP4-207ENST00000457109 Q8WTZ3 238 aa6.49□□□□□ -1.37
PKP4-207ENST00000457109 ST8SIA2Q92186 375 aa6.49□□□□□ -1.37
PKP4-207ENST00000457109 C11orf68Q9H3H3 251 aaKnown RBP6.49□□□□□ -1.37
PKP4-207ENST00000457109 HEYLQ9NQ87 328 aaPredicted RBP6.49□□□□□ -1.37
PKP4-207ENST00000457109 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.49□□□□□ -1.37
PKP4-207ENST00000457109 CACFD1Q9UGQ2 172 aa6.49□□□□□ -1.37
PKP4-207ENST00000457109 C14orf166Q9Y224 244 aaKnown RBP6.49□□□□□ -1.37
PKP4-207ENST00000457109 TEX13DA0A0J9YY54 714 aaPredicted RBP6.48□□□□□ -1.37
PKP4-207ENST00000457109 HELTA6NFD8 242 aa6.48□□□□□ -1.37
PKP4-207ENST00000457109 C11orf94C9JXX5 98 aa6.48□□□□□ -1.37
PKP4-207ENST00000457109 CLN5O75503 358 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms