RNA–Protein interactions for RNA: ENST00000456563.1

FAM239A-203, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 3

Gene FAM239A, Length 793 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-203ENST00000456563 IAPPP10997 89 aa13.82□□□□□ -0.2
FAM239A-203ENST00000456563 EXOSC2Q13868 293 aaKnown RBP13.82□□□□□ -0.2
FAM239A-203ENST00000456563 NOXA1Q86UR1 476 aa13.82□□□□□ -0.2
FAM239A-203ENST00000456563 VN1R17PQ8TDU5 208 aa13.82□□□□□ -0.2
FAM239A-203ENST00000456563 K7EIM0 57 aa13.81□□□□□ -0.2
FAM239A-203ENST00000456563 SCGB1D2O95969 90 aa13.81□□□□□ -0.2
FAM239A-203ENST00000456563 IFNA10P01566 189 aa13.81□□□□□ -0.2
FAM239A-203ENST00000456563 NPY1RP25929 384 aa13.81□□□□□ -0.2
FAM239A-203ENST00000456563 CYCSP99999 105 aaKnown RBP13.81□□□□□ -0.2
FAM239A-203ENST00000456563 FAM209BQ5JX69 171 aa13.81□□□□□ -0.2
FAM239A-203ENST00000456563 TMEM170AQ8WVE7 144 aa13.81□□□□□ -0.2
FAM239A-203ENST00000456563 EEF1AKMT3Q96AZ1 226 aa13.81□□□□□ -0.2
FAM239A-203ENST00000456563 MISP3Q96FF7 219 aa13.81□□□□□ -0.2
FAM239A-203ENST00000456563 NMES1Q9C002 83 aa13.81□□□□□ -0.2
FAM239A-203ENST00000456563 MGAT4CQ9UBM8 478 aa13.81□□□□□ -0.2
FAM239A-203ENST00000456563 ANK2Q01484 3957 aa13.81□□□□□ -0.2
FAM239A-203ENST00000456563 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.8□□□□□ -0.2
FAM239A-203ENST00000456563 TRBV7-1A0A0A6YYK4 115 aa13.8□□□□□ -0.2
FAM239A-203ENST00000456563 MFSD2BA6NFX1 497 aa13.8□□□□□ -0.2
FAM239A-203ENST00000456563 I3L2K1 104 aa13.8□□□□□ -0.2
FAM239A-203ENST00000456563 TSPAN15O95858 294 aa13.8□□□□□ -0.2
FAM239A-203ENST00000456563 HSPB1P04792 205 aaKnown RBP13.8□□□□□ -0.2
FAM239A-203ENST00000456563 MYCNOSP40205 109 aa13.8□□□□□ -0.2
FAM239A-203ENST00000456563 H2BFSP57053 126 aa13.8□□□□□ -0.2
FAM239A-203ENST00000456563 DEFB136Q30KP8 78 aa13.8□□□□□ -0.2
FAM239A-203ENST00000456563 ETV3LQ6ZN32 361 aa13.8□□□□□ -0.2
FAM239A-203ENST00000456563 RAX2Q96IS3 184 aa13.8□□□□□ -0.2
FAM239A-203ENST00000456563 SMIM8Q96KF7 97 aa13.8□□□□□ -0.2
FAM239A-203ENST00000456563 RAB40CQ96S21 281 aa13.8□□□□□ -0.2
FAM239A-203ENST00000456563 MED28Q9H204 178 aa13.8□□□□□ -0.2
FAM239A-203ENST00000456563 RCL1Q9Y2P8 373 aaKnown RBP13.8□□□□□ -0.2
FAM239A-203ENST00000456563 C15orf62A8K5M9 175 aa13.79□□□□□ -0.2
FAM239A-203ENST00000456563 K7EPK0 472 aa13.79□□□□□ -0.2
FAM239A-203ENST00000456563 CCL24O00175 119 aa13.79□□□□□ -0.2
FAM239A-203ENST00000456563 SSSCA1O60232 199 aa13.79□□□□□ -0.2
FAM239A-203ENST00000456563 MT-CO2P00403 227 aa13.79□□□□□ -0.2
FAM239A-203ENST00000456563 TAS2R30P59541 319 aa13.79□□□□□ -0.2
FAM239A-203ENST00000456563 RPP30P78346 268 aaKnown RBP13.79□□□□□ -0.2
FAM239A-203ENST00000456563 FHL3Q13643 280 aa13.79□□□□□ -0.2
FAM239A-203ENST00000456563 OR11H1Q8NG94 326 aa13.79□□□□□ -0.2
FAM239A-203ENST00000456563 OR1N2Q8NGR9 330 aa13.79□□□□□ -0.2
FAM239A-203ENST00000456563 ZNF502Q8TBZ5 544 aa13.79□□□□□ -0.2
FAM239A-203ENST00000456563 RNASEH2CQ8TDP1 164 aaKnown RBP13.79□□□□□ -0.2
FAM239A-203ENST00000456563 SCARB1Q8WTV0 552 aa13.79□□□□□ -0.2
FAM239A-203ENST00000456563 CCDC140Q96MF4 163 aa13.79□□□□□ -0.2
FAM239A-203ENST00000456563 ATP6V0BQ99437 205 aa13.79□□□□□ -0.2
FAM239A-203ENST00000456563 RANGRFQ9HD47 186 aaPredicted RBP13.79□□□□□ -0.2
FAM239A-203ENST00000456563 PEF1Q9UBV8 284 aaKnown RBP13.79□□□□□ -0.2
FAM239A-203ENST00000456563 DNHD1Q96M86 4753 aa13.79□□□□□ -0.2
FAM239A-203ENST00000456563 TMEM50AO95807 157 aa13.78□□□□□ -0.2
FAM239A-203ENST00000456563 PAX9P55771 341 aa13.78□□□□□ -0.2
FAM239A-203ENST00000456563 ZNF616Q08AN1 781 aa13.78□□□□□ -0.2
FAM239A-203ENST00000456563 RAB32Q13637 225 aa13.78□□□□□ -0.2
FAM239A-203ENST00000456563 FCN2Q15485 313 aa13.78□□□□□ -0.2
FAM239A-203ENST00000456563 PINX1Q96BK5 328 aaKnown RBP13.78□□□□□ -0.2
FAM239A-203ENST00000456563 C21orf62Q9NYP8 219 aa13.78□□□□□ -0.2
FAM239A-203ENST00000456563 PSENENQ9NZ42 101 aa13.78□□□□□ -0.2
FAM239A-203ENST00000456563 LSM5Q9Y4Y9 91 aaKnown RBP13.78□□□□□ -0.2
FAM239A-203ENST00000456563 S4R3C0 116 aa13.78□□□□□ -0.2
FAM239A-203ENST00000456563 IGHV4OR15-8A0A075B7B6 117 aa13.77□□□□□ -0.21
FAM239A-203ENST00000456563 A0A087WW49 117 aa13.77□□□□□ -0.21
FAM239A-203ENST00000456563 IGHV3-21A0A0B4J1V1 117 aa13.77□□□□□ -0.21
FAM239A-203ENST00000456563 ANKRD34BA5PLL1 514 aa13.77□□□□□ -0.21
FAM239A-203ENST00000456563 LINC01619G3V211 115 aa13.77□□□□□ -0.21
FAM239A-203ENST00000456563 IGHV3-23P01764 117 aa13.77□□□□□ -0.21
FAM239A-203ENST00000456563 PF4P02776 101 aa13.77□□□□□ -0.21
FAM239A-203ENST00000456563 CXCL3P19876 107 aa13.77□□□□□ -0.21
FAM239A-203ENST00000456563 FCGR2BP31994 310 aaPredicted RBP13.77□□□□□ -0.21
FAM239A-203ENST00000456563 RRAS2P62070 204 aaPredicted RBP13.77□□□□□ -0.21
FAM239A-203ENST00000456563 RAB11AP62491 216 aa13.77□□□□□ -0.21
FAM239A-203ENST00000456563 SPANXN5Q5MJ07 72 aa13.77□□□□□ -0.21
FAM239A-203ENST00000456563 OR11H7Q8NGC8 314 aa13.77□□□□□ -0.21
FAM239A-203ENST00000456563 DPF1Q92782 380 aa13.77□□□□□ -0.21
FAM239A-203ENST00000456563 DUX3Q96PT4 197 aa13.77□□□□□ -0.21
FAM239A-203ENST00000456563 C11orf1Q9H5F2 150 aa13.77□□□□□ -0.21
FAM239A-203ENST00000456563 FNDC4Q9H6D8 234 aaPredicted RBP13.77□□□□□ -0.21
FAM239A-203ENST00000456563 STRAPQ9Y3F4 350 aaKnown RBP13.77□□□□□ -0.21
FAM239A-203ENST00000456563 RPS10-NUDT3A0A1W2PQS6 291 aa13.76□□□□□ -0.21
FAM239A-203ENST00000456563 TSC22D2O75157 780 aa13.76□□□□□ -0.21
FAM239A-203ENST00000456563 TRBV12-3P01733 135 aa13.76□□□□□ -0.21
FAM239A-203ENST00000456563 IFNA4P05014 189 aa13.76□□□□□ -0.21
FAM239A-203ENST00000456563 OPRK1P41145 380 aa13.76□□□□□ -0.21
FAM239A-203ENST00000456563 MFAP4P55083 255 aa13.76□□□□□ -0.21
FAM239A-203ENST00000456563 PRR31Q5SQ13 230 aa13.76□□□□□ -0.21
FAM239A-203ENST00000456563 CLEC19AQ6UXS0 136 aa13.76□□□□□ -0.21
FAM239A-203ENST00000456563 OR4C12Q96R67 309 aa13.76□□□□□ -0.21
FAM239A-203ENST00000456563 TXN2Q99757 166 aa13.76□□□□□ -0.21
FAM239A-203ENST00000456563 F8W735 103 aaPredicted RBP13.75□□□□□ -0.21
FAM239A-203ENST00000456563 H3BP45 60 aa13.75□□□□□ -0.21
FAM239A-203ENST00000456563 CLEC3BP05452 202 aa13.75□□□□□ -0.21
FAM239A-203ENST00000456563 OR8U8P0C7N1 319 aa13.75□□□□□ -0.21
FAM239A-203ENST00000456563 PVALBP20472 110 aaPredicted RBP13.75□□□□□ -0.21
FAM239A-203ENST00000456563 S100A10P60903 97 aa13.75□□□□□ -0.21
FAM239A-203ENST00000456563 MLANAQ16655 118 aa13.75□□□□□ -0.21
FAM239A-203ENST00000456563 WDR89Q96FK6 387 aaPredicted RBP13.75□□□□□ -0.21
FAM239A-203ENST00000456563 GAR1Q9NY12 217 aaKnown RBP13.75□□□□□ -0.21
FAM239A-203ENST00000456563 L7N2F9 121 aa13.74□□□□□ -0.21
FAM239A-203ENST00000456563 BMPR1BO00238 502 aa13.74□□□□□ -0.21
FAM239A-203ENST00000456563 DEDDO75618 318 aa13.74□□□□□ -0.21
FAM239A-203ENST00000456563 RLN2P04090 185 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms