RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 MARCH1Q8TCQ1 289 aa13.41□□□□□ -0.26
MSH6-207ENST00000456246 PRRT1Q99946 306 aa13.41□□□□□ -0.26
MSH6-207ENST00000456246 CHRDL1Q9BU40 450 aa13.41□□□□□ -0.26
MSH6-207ENST00000456246 RSL24D1Q9UHA3 163 aaKnown RBP13.41□□□□□ -0.26
MSH6-207ENST00000456246 IGHV3-21A0A0B4J1V1 117 aa13.4□□□□□ -0.26
MSH6-207ENST00000456246 CORTO00230 105 aa13.4□□□□□ -0.26
MSH6-207ENST00000456246 IFNA17P01571 189 aa13.4□□□□□ -0.26
MSH6-207ENST00000456246 ADMP35318 185 aa13.4□□□□□ -0.26
MSH6-207ENST00000456246 SNCAP37840 140 aa13.4□□□□□ -0.26
MSH6-207ENST00000456246 CASC10Q5T4H9 136 aa13.4□□□□□ -0.26
MSH6-207ENST00000456246 RNASE11Q8TAA1 199 aaKnown RBP13.4□□□□□ -0.26
MSH6-207ENST00000456246 C6orf62Q9GZU0 229 aaPredicted RBP13.4□□□□□ -0.26
MSH6-207ENST00000456246 EDA2RQ9HAV5 297 aa13.4□□□□□ -0.26
MSH6-207ENST00000456246 TSPAN4O14817 238 aa13.39□□□□□ -0.27
MSH6-207ENST00000456246 GSTZ1O43708 216 aaPredicted RBP13.39□□□□□ -0.27
MSH6-207ENST00000456246 MT-CO2P00403 227 aa13.39□□□□□ -0.27
MSH6-207ENST00000456246 CTSGP08311 255 aa13.39□□□□□ -0.27
MSH6-207ENST00000456246 SUB1P53999 127 aaKnown RBP eCLIP13.39□□□□□ -0.27
MSH6-207ENST00000456246 C20orf24Q9BUV8 137 aa13.39□□□□□ -0.27
MSH6-207ENST00000456246 TMEM222Q9H0R3 208 aa13.39□□□□□ -0.27
MSH6-207ENST00000456246 WFDC10AQ9H1F0 79 aa13.39□□□□□ -0.27
MSH6-207ENST00000456246 HIPK2Q9H2X6 1198 aa13.39□□□□□ -0.27
MSH6-207ENST00000456246 ENY2Q9NPA8 101 aa13.39□□□□□ -0.27
MSH6-207ENST00000456246 A0A0B4J293 547 aa13.38□□□□□ -0.27
MSH6-207ENST00000456246 TEX13DA0A0J9YY54 714 aaPredicted RBP13.38□□□□□ -0.27
MSH6-207ENST00000456246 RBMY1BA6NDE4 496 aaKnown RBP13.38□□□□□ -0.27
MSH6-207ENST00000456246 RBMY1EA6NEQ0 496 aaKnown RBP13.38□□□□□ -0.27
MSH6-207ENST00000456246 H3BMQ9 156 aa13.38□□□□□ -0.27
MSH6-207ENST00000456246 ST8SIA3O43173 380 aa13.38□□□□□ -0.27
MSH6-207ENST00000456246 GNG7O60262 68 aa13.38□□□□□ -0.27
MSH6-207ENST00000456246 CDS2O95674 445 aa13.38□□□□□ -0.27
MSH6-207ENST00000456246 RBMY1DP0C7P1 496 aaKnown RBP13.38□□□□□ -0.27
MSH6-207ENST00000456246 NPBWR1P48145 328 aa13.38□□□□□ -0.27
MSH6-207ENST00000456246 DHODHQ02127 395 aa13.38□□□□□ -0.27
MSH6-207ENST00000456246 IZUMO4Q1ZYL8 232 aa13.38□□□□□ -0.27
MSH6-207ENST00000456246 SP6Q3SY56 376 aa13.38□□□□□ -0.27
MSH6-207ENST00000456246 OR4C16Q8NGL9 310 aa13.38□□□□□ -0.27
MSH6-207ENST00000456246 PINX1Q96BK5 328 aaKnown RBP13.38□□□□□ -0.27
MSH6-207ENST00000456246 SCGB3A2Q96PL1 93 aa13.38□□□□□ -0.27
MSH6-207ENST00000456246 SLIRPQ9GZT3 109 aaKnown RBP13.38□□□□□ -0.27
MSH6-207ENST00000456246 NAA60Q9H7X0 242 aa13.38□□□□□ -0.27
MSH6-207ENST00000456246 CACFD1Q9UGQ2 172 aa13.38□□□□□ -0.27
MSH6-207ENST00000456246 SCP2D1Q9UJQ7 156 aa13.38□□□□□ -0.27
MSH6-207ENST00000456246 ANKRD20A5PA0PJZ0 165 aa13.37□□□□□ -0.27
MSH6-207ENST00000456246 OR5AC1P0C628 307 aa13.37□□□□□ -0.27
MSH6-207ENST00000456246 BMI1P35226 326 aa13.37□□□□□ -0.27
MSH6-207ENST00000456246 HOXA1P49639 335 aaPredicted RBP13.37□□□□□ -0.27
MSH6-207ENST00000456246 FAAP20Q6NZ36 180 aa13.37□□□□□ -0.27
MSH6-207ENST00000456246 RBPMSQ93062 196 aaKnown RBP13.37□□□□□ -0.27
MSH6-207ENST00000456246 OR10C1Q96KK4 312 aa13.37□□□□□ -0.27
MSH6-207ENST00000456246 RTBDNQ9BSG5 229 aaPredicted RBP13.37□□□□□ -0.27
MSH6-207ENST00000456246 NXF2Q9GZY0 626 aaKnown RBP13.37□□□□□ -0.27
MSH6-207ENST00000456246 OR4C46A6NHA9 309 aa13.36□□□□□ -0.27
MSH6-207ENST00000456246 SCGB2A1O75556 95 aa13.36□□□□□ -0.27
MSH6-207ENST00000456246 AARDQ4LEZ3 155 aa13.36□□□□□ -0.27
MSH6-207ENST00000456246 SPINK9Q5DT21 86 aa13.36□□□□□ -0.27
MSH6-207ENST00000456246 PVRIGQ6DKI7 326 aa13.36□□□□□ -0.27
MSH6-207ENST00000456246 DUSP18Q8NEJ0 188 aa13.36□□□□□ -0.27
MSH6-207ENST00000456246 OR52E5Q8NH55 327 aa13.36□□□□□ -0.27
MSH6-207ENST00000456246 FAM110AQ9BQ89 295 aa13.36□□□□□ -0.27
MSH6-207ENST00000456246 GINS3Q9BRX5 216 aa13.36□□□□□ -0.27
MSH6-207ENST00000456246 GGTLC1Q9BX51 225 aa13.36□□□□□ -0.27
MSH6-207ENST00000456246 GPR132Q9UNW8 380 aa13.36□□□□□ -0.27
MSH6-207ENST00000456246 SELENOKQ9Y6D0 94 aa13.36□□□□□ -0.27
MSH6-207ENST00000456246 LOC102724200A0A096LPH7 203 aaPredicted RBP13.35□□□□□ -0.27
MSH6-207ENST00000456246 FABP12A6NFH5 140 aa13.35□□□□□ -0.27
MSH6-207ENST00000456246 CRYM-AS1A6NIL9 109 aa13.35□□□□□ -0.27
MSH6-207ENST00000456246 YIF1AO95070 293 aa13.35□□□□□ -0.27
MSH6-207ENST00000456246 SPCS3P61009 180 aa13.35□□□□□ -0.27
MSH6-207ENST00000456246 OR51S1Q8NGJ8 323 aa13.35□□□□□ -0.27
MSH6-207ENST00000456246 MCFD2Q8NI22 146 aa13.35□□□□□ -0.27
MSH6-207ENST00000456246 IL17DQ8TAD2 202 aa13.35□□□□□ -0.27
MSH6-207ENST00000456246 GLYATL2Q8WU03 294 aa13.35□□□□□ -0.27
MSH6-207ENST00000456246 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.35□□□□□ -0.27
MSH6-207ENST00000456246 SMPXQ9UHP9 88 aa13.35□□□□□ -0.27
MSH6-207ENST00000456246 KCNIP3Q9Y2W7 256 aa13.35□□□□□ -0.27
MSH6-207ENST00000456246 A0A0G2JRQ6 117 aa13.34□□□□□ -0.27
MSH6-207ENST00000456246 IGHV7-4-1A0A0J9YVY3 117 aa13.34□□□□□ -0.27
MSH6-207ENST00000456246 CD5P06127 495 aa13.34□□□□□ -0.27
MSH6-207ENST00000456246 FAUP35544 74 aaKnown RBP13.34□□□□□ -0.27
MSH6-207ENST00000456246 IL22RA2Q969J5 263 aa13.34□□□□□ -0.27
MSH6-207ENST00000456246 SOSTQ9BQB4 213 aa13.34□□□□□ -0.27
MSH6-207ENST00000456246 TRAV14DV4A0A0A6YYC5 116 aa13.33□□□□□ -0.28
MSH6-207ENST00000456246 PIGBOS1A0A0B4J2F0 54 aa13.33□□□□□ -0.28
MSH6-207ENST00000456246 RNASE2P10153 161 aaKnown RBP13.33□□□□□ -0.28
MSH6-207ENST00000456246 TNFSF8P32971 234 aa13.33□□□□□ -0.28
MSH6-207ENST00000456246 ETV6P41212 452 aa13.33□□□□□ -0.28
MSH6-207ENST00000456246 TMEM116Q8NCL8 245 aa13.33□□□□□ -0.28
MSH6-207ENST00000456246 GALNT14Q96FL9 552 aa13.33□□□□□ -0.28
MSH6-207ENST00000456246 RHPN1-AS1Q9BWJ2 59 aa13.33□□□□□ -0.28
MSH6-207ENST00000456246 TMEM56-RWDD3S4R434 201 aa13.33□□□□□ -0.28
MSH6-207ENST00000456246 IGHV3OR16-8A0A075B7F1 116 aa13.32□□□□□ -0.28
MSH6-207ENST00000456246 CHEK1O14757 476 aa13.32□□□□□ -0.28
MSH6-207ENST00000456246 ZNF207O43670 478 aaKnown RBP13.32□□□□□ -0.28
MSH6-207ENST00000456246 IGHV3-48P01763 117 aa13.32□□□□□ -0.28
MSH6-207ENST00000456246 OPRK1P41145 380 aa13.32□□□□□ -0.28
MSH6-207ENST00000456246 HTR2BP41595 481 aa13.32□□□□□ -0.28
MSH6-207ENST00000456246 APOC4P55056 127 aa13.32□□□□□ -0.28
MSH6-207ENST00000456246 CMC4P56277 68 aaPredicted RBP13.32□□□□□ -0.28
MSH6-207ENST00000456246 AP3S2P59780 193 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms