RNA–Protein interactions for RNA: ENST00000455906.1

COL20A1-204, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 5

Gene COL20A1, Length 750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-204ENST00000455906 BATF3Q9NR55 127 aa13.77□□□□□ -0.21
COL20A1-204ENST00000455906 FAM212BQ9NTI7 297 aaPredicted RBP13.77□□□□□ -0.21
COL20A1-204ENST00000455906 H3BMQ9 156 aa13.76□□□□□ -0.21
COL20A1-204ENST00000455906 HLA-DMAP28067 261 aa13.76□□□□□ -0.21
COL20A1-204ENST00000455906 TFPI2P48307 235 aa13.76□□□□□ -0.21
COL20A1-204ENST00000455906 MFAP4P55083 255 aa13.76□□□□□ -0.21
COL20A1-204ENST00000455906 GPX8Q8TED1 209 aa13.76□□□□□ -0.21
COL20A1-204ENST00000455906 MISP3Q96FF7 219 aa13.76□□□□□ -0.21
COL20A1-204ENST00000455906 TXN2Q99757 166 aa13.76□□□□□ -0.21
COL20A1-204ENST00000455906 C6orf62Q9GZU0 229 aaPredicted RBP13.76□□□□□ -0.21
COL20A1-204ENST00000455906 NXF2Q9GZY0 626 aaKnown RBP13.76□□□□□ -0.21
COL20A1-204ENST00000455906 IGKV3-7A0A075B6H7 116 aa13.75□□□□□ -0.21
COL20A1-204ENST00000455906 ZNF701M0R085 212 aaPredicted RBP13.75□□□□□ -0.21
COL20A1-204ENST00000455906 YIF1AO95070 293 aa13.75□□□□□ -0.21
COL20A1-204ENST00000455906 MT-CO2P00403 227 aa13.75□□□□□ -0.21
COL20A1-204ENST00000455906 IGHV3-48P01763 117 aa13.75□□□□□ -0.21
COL20A1-204ENST00000455906 RORCP51449 518 aa13.75□□□□□ -0.21
COL20A1-204ENST00000455906 PRCDQ00LT1 54 aa13.75□□□□□ -0.21
COL20A1-204ENST00000455906 SPCS2Q15005 226 aa13.75□□□□□ -0.21
COL20A1-204ENST00000455906 TBC1D26Q86UD7 250 aa13.75□□□□□ -0.21
COL20A1-204ENST00000455906 RBM38Q9H0Z9 239 aaKnown RBP13.75□□□□□ -0.21
COL20A1-204ENST00000455906 IGHV3OR16-13A0A075B7E8 117 aa13.74□□□□□ -0.21
COL20A1-204ENST00000455906 TRAV14DV4A0A0A6YYC5 116 aa13.74□□□□□ -0.21
COL20A1-204ENST00000455906 IGHV3-74A0A0B4J1X5 117 aa13.74□□□□□ -0.21
COL20A1-204ENST00000455906 MPTX1A8MV57 137 aa13.74□□□□□ -0.21
COL20A1-204ENST00000455906 EIF4EP06730 217 aaKnown RBP13.74□□□□□ -0.21
COL20A1-204ENST00000455906 CMC4P56277 68 aaPredicted RBP13.74□□□□□ -0.21
COL20A1-204ENST00000455906 GBGT1Q8N5D6 347 aa13.74□□□□□ -0.21
COL20A1-204ENST00000455906 GATAD1Q8WUU5 269 aa13.74□□□□□ -0.21
COL20A1-204ENST00000455906 DEDDO75618 318 aa13.73□□□□□ -0.21
COL20A1-204ENST00000455906 HSPE1P61604 102 aaKnown RBP13.73□□□□□ -0.21
COL20A1-204ENST00000455906 LGALS9CQ6DKI2 356 aa13.73□□□□□ -0.21
COL20A1-204ENST00000455906 LPCAT3Q6P1A2 487 aa13.73□□□□□ -0.21
COL20A1-204ENST00000455906 H2BFWTQ7Z2G1 175 aa13.73□□□□□ -0.21
COL20A1-204ENST00000455906 OR4A16Q8NH70 328 aa13.73□□□□□ -0.21
COL20A1-204ENST00000455906 MRGPRFQ96AM1 343 aa13.73□□□□□ -0.21
COL20A1-204ENST00000455906 RARRES2Q99969 163 aa13.73□□□□□ -0.21
COL20A1-204ENST00000455906 UCP3P55916 312 aa13.72□□□□□ -0.21
COL20A1-204ENST00000455906 TSPAN5P62079 268 aa13.72□□□□□ -0.21
COL20A1-204ENST00000455906 TOMM20LQ6UXN7 152 aa13.72□□□□□ -0.21
COL20A1-204ENST00000455906 TCF24Q7RTU0 167 aa13.72□□□□□ -0.21
COL20A1-204ENST00000455906 LILRB2Q8N423 598 aa13.72□□□□□ -0.21
COL20A1-204ENST00000455906 ST8SIA2Q92186 375 aa13.72□□□□□ -0.21
COL20A1-204ENST00000455906 AP3S1Q92572 193 aa13.72□□□□□ -0.21
COL20A1-204ENST00000455906 PINX1Q96BK5 328 aaKnown RBP13.72□□□□□ -0.21
COL20A1-204ENST00000455906 C11orf68Q9H3H3 251 aaKnown RBP13.72□□□□□ -0.21
COL20A1-204ENST00000455906 VSIRQ9H7M9 311 aa13.72□□□□□ -0.21
COL20A1-204ENST00000455906 A6NHS1 94 aa13.71□□□□□ -0.21
COL20A1-204ENST00000455906 GNG7O60262 68 aa13.71□□□□□ -0.21
COL20A1-204ENST00000455906 APOHP02749 345 aaPredicted RBP13.71□□□□□ -0.21
COL20A1-204ENST00000455906 ZNF182P17025 639 aaPredicted RBP13.71□□□□□ -0.21
COL20A1-204ENST00000455906 S100GP29377 79 aa13.71□□□□□ -0.21
COL20A1-204ENST00000455906 NANOS2P60321 138 aaKnown RBP13.71□□□□□ -0.21
COL20A1-204ENST00000455906 IZUMO4Q1ZYL8 232 aa13.71□□□□□ -0.21
COL20A1-204ENST00000455906 CMTM3Q96MX0 182 aa13.71□□□□□ -0.21
COL20A1-204ENST00000455906 SCPEP1Q9HB40 452 aa13.71□□□□□ -0.21
COL20A1-204ENST00000455906 ERHP84090 104 aaKnown RBP13.7□□□□□ -0.22
COL20A1-204ENST00000455906 SPINK9Q5DT21 86 aa13.7□□□□□ -0.22
COL20A1-204ENST00000455906 MZT2AQ6P582 158 aa13.7□□□□□ -0.22
COL20A1-204ENST00000455906 OR11H2Q8NH07 326 aa13.7□□□□□ -0.22
COL20A1-204ENST00000455906 DYNC2LI1Q8TCX1 351 aa13.7□□□□□ -0.22
COL20A1-204ENST00000455906 GINS3Q9BRX5 216 aa13.7□□□□□ -0.22
COL20A1-204ENST00000455906 MS4A6AQ9H2W1 248 aa13.7□□□□□ -0.22
COL20A1-204ENST00000455906 ZFAND3Q9H8U3 227 aa13.7□□□□□ -0.22
COL20A1-204ENST00000455906 AGRNO00468 2067 aa13.69□□□□□ -0.22
COL20A1-204ENST00000455906 APOA1P02647 267 aa13.69□□□□□ -0.22
COL20A1-204ENST00000455906 CD5P06127 495 aa13.69□□□□□ -0.22
COL20A1-204ENST00000455906 RCVRNP35243 200 aa13.69□□□□□ -0.22
COL20A1-204ENST00000455906 PAFAH1B2P68402 229 aa13.69□□□□□ -0.22
COL20A1-204ENST00000455906 SNX29P2Q8IUI4 249 aa13.69□□□□□ -0.22
COL20A1-204ENST00000455906 FAM24BQ8N5W8 94 aa13.69□□□□□ -0.22
COL20A1-204ENST00000455906 C11orf45Q8TAV5 145 aa13.69□□□□□ -0.22
COL20A1-204ENST00000455906 KRTAP17-1Q9BYP8 105 aa13.69□□□□□ -0.22
COL20A1-204ENST00000455906 CCDC59Q9P031 241 aaKnown RBP13.69□□□□□ -0.22
COL20A1-204ENST00000455906 COMMD3Q9UBI1 195 aa13.69□□□□□ -0.22
COL20A1-204ENST00000455906 FAT2Q9NYQ8 4349 aa13.69□□□□□ -0.22
COL20A1-204ENST00000455906 DNAH2Q9P225 4427 aa13.68□□□□□ -0.22
COL20A1-204ENST00000455906 INS-IGF2F8WCM5 200 aa13.68□□□□□ -0.22
COL20A1-204ENST00000455906 ST8SIA3O43173 380 aa13.68□□□□□ -0.22
COL20A1-204ENST00000455906 DFFBO76075 338 aa13.68□□□□□ -0.22
COL20A1-204ENST00000455906 CA1P00915 261 aaPredicted RBP13.68□□□□□ -0.22
COL20A1-204ENST00000455906 IGKV1-5P01602 117 aa13.68□□□□□ -0.22
COL20A1-204ENST00000455906 P0C879 139 aa13.68□□□□□ -0.22
COL20A1-204ENST00000455906 NPBWR1P48145 328 aa13.68□□□□□ -0.22
COL20A1-204ENST00000455906 PVRIGQ6DKI7 326 aa13.68□□□□□ -0.22
COL20A1-204ENST00000455906 MFFQ9GZY8 342 aa13.68□□□□□ -0.22
COL20A1-204ENST00000455906 PUS1Q9Y606 427 aaKnown RBP eCLIP13.68□□□□□ -0.22
COL20A1-204ENST00000455906 TRAV2A0A0B4J234 112 aa13.67□□□□□ -0.22
COL20A1-204ENST00000455906 A0A0B4J293 547 aa13.67□□□□□ -0.22
COL20A1-204ENST00000455906 IGHV3-66A0A0C4DH42 116 aa13.67□□□□□ -0.22
COL20A1-204ENST00000455906 A0A1B0GU03 582 aa13.67□□□□□ -0.22
COL20A1-204ENST00000455906 M0QYG6 137 aa13.67□□□□□ -0.22
COL20A1-204ENST00000455906 DEFB131AP59861 70 aa13.67□□□□□ -0.22
COL20A1-204ENST00000455906 RND3P61587 244 aa13.67□□□□□ -0.22
COL20A1-204ENST00000455906 RBMS2Q15434 407 aaKnown RBP13.67□□□□□ -0.22
COL20A1-204ENST00000455906 LEMD1Q68G75 181 aa13.67□□□□□ -0.22
COL20A1-204ENST00000455906 ZNF600Q6ZNG1 722 aa13.67□□□□□ -0.22
COL20A1-204ENST00000455906 DUSP18Q8NEJ0 188 aa13.67□□□□□ -0.22
COL20A1-204ENST00000455906 FBXL17Q9UF56 701 aa13.67□□□□□ -0.22
COL20A1-204ENST00000455906 DEFB4AO15263 64 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms