RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 RTBDNQ9BSG5 229 aaPredicted RBP15.94■□□□□ 0.14
HMGB3-205ENST00000455596 WFDC10AQ9H1F0 79 aa15.94■□□□□ 0.14
HMGB3-205ENST00000455596 SRD5A3Q9H8P0 318 aa15.94■□□□□ 0.14
HMGB3-205ENST00000455596 DAZ1Q9NQZ3 744 aaKnown RBP15.94■□□□□ 0.14
HMGB3-205ENST00000455596 TEX13DA0A0J9YY54 714 aaPredicted RBP15.93■□□□□ 0.14
HMGB3-205ENST00000455596 NUPL2O15504 423 aaKnown RBP15.93■□□□□ 0.14
HMGB3-205ENST00000455596 ST8SIA3O43173 380 aa15.93■□□□□ 0.14
HMGB3-205ENST00000455596 MT-CO2P00403 227 aa15.93■□□□□ 0.14
HMGB3-205ENST00000455596 OR5AC1P0C628 307 aa15.93■□□□□ 0.14
HMGB3-205ENST00000455596 MCFD2Q8NI22 146 aa15.93■□□□□ 0.14
HMGB3-205ENST00000455596 PINX1Q96BK5 328 aaKnown RBP15.93■□□□□ 0.14
HMGB3-205ENST00000455596 PRRT1Q99946 306 aa15.93■□□□□ 0.14
HMGB3-205ENST00000455596 C20orf24Q9BUV8 137 aa15.93■□□□□ 0.14
HMGB3-205ENST00000455596 ANKRD20A5PA0PJZ0 165 aa15.92■□□□□ 0.14
HMGB3-205ENST00000455596 INS-IGF2F8WCM5 200 aa15.92■□□□□ 0.14
HMGB3-205ENST00000455596 K7EMT4 169 aa15.92■□□□□ 0.14
HMGB3-205ENST00000455596 CTSGP08311 255 aa15.92■□□□□ 0.14
HMGB3-205ENST00000455596 FCGR2BP31994 310 aaPredicted RBP15.92■□□□□ 0.14
HMGB3-205ENST00000455596 TNFSF8P32971 234 aa15.92■□□□□ 0.14
HMGB3-205ENST00000455596 SNCAP37840 140 aa15.92■□□□□ 0.14
HMGB3-205ENST00000455596 RELQ04864 619 aaPredicted RBP15.92■□□□□ 0.14
HMGB3-205ENST00000455596 NXF2Q9GZY0 626 aaKnown RBP15.92■□□□□ 0.14
HMGB3-205ENST00000455596 TMEM222Q9H0R3 208 aa15.92■□□□□ 0.14
HMGB3-205ENST00000455596 C5orf66Q9H5L9 145 aa15.92■□□□□ 0.14
HMGB3-205ENST00000455596 NAA60Q9H7X0 242 aa15.92■□□□□ 0.14
HMGB3-205ENST00000455596 GPR132Q9UNW8 380 aa15.92■□□□□ 0.14
HMGB3-205ENST00000455596 FABP12A6NFH5 140 aa15.91■□□□□ 0.14
HMGB3-205ENST00000455596 CDS2O95674 445 aa15.91■□□□□ 0.14
HMGB3-205ENST00000455596 DHODHQ02127 395 aa15.91■□□□□ 0.14
HMGB3-205ENST00000455596 FAM219AQ8IW50 185 aa15.91■□□□□ 0.14
HMGB3-205ENST00000455596 OR51S1Q8NGJ8 323 aa15.91■□□□□ 0.14
HMGB3-205ENST00000455596 GLYATL2Q8WU03 294 aa15.91■□□□□ 0.14
HMGB3-205ENST00000455596 IGHV3OR16-8A0A075B7F1 116 aa15.9■□□□□ 0.14
HMGB3-205ENST00000455596 A0A0G2JRQ6 117 aa15.9■□□□□ 0.14
HMGB3-205ENST00000455596 RBMY1BA6NDE4 496 aaKnown RBP15.9■□□□□ 0.14
HMGB3-205ENST00000455596 RBMY1EA6NEQ0 496 aaKnown RBP15.9■□□□□ 0.14
HMGB3-205ENST00000455596 C15orf62A8K5M9 175 aa15.9■□□□□ 0.14
HMGB3-205ENST00000455596 GNG7O60262 68 aa15.9■□□□□ 0.14
HMGB3-205ENST00000455596 RBMY1DP0C7P1 496 aaKnown RBP15.9■□□□□ 0.14
HMGB3-205ENST00000455596 HOXA1P49639 335 aaPredicted RBP15.9■□□□□ 0.14
HMGB3-205ENST00000455596 SUB1P53999 127 aaKnown RBP eCLIP15.9■□□□□ 0.14
HMGB3-205ENST00000455596 RBPMSQ93062 196 aaKnown RBP15.9■□□□□ 0.14
HMGB3-205ENST00000455596 SOSTQ9BQB4 213 aa15.9■□□□□ 0.14
HMGB3-205ENST00000455596 ENY2Q9NPA8 101 aa15.9■□□□□ 0.14
HMGB3-205ENST00000455596 SCP2D1Q9UJQ7 156 aa15.9■□□□□ 0.14
HMGB3-205ENST00000455596 CRYM-AS1A6NIL9 109 aa15.89■□□□□ 0.13
HMGB3-205ENST00000455596 CORTO00230 105 aa15.89■□□□□ 0.13
HMGB3-205ENST00000455596 ZNF207O43670 478 aaKnown RBP15.89■□□□□ 0.13
HMGB3-205ENST00000455596 IGHV3-48P01763 117 aa15.89■□□□□ 0.13
HMGB3-205ENST00000455596 ETV6P41212 452 aa15.89■□□□□ 0.13
HMGB3-205ENST00000455596 LAMTOR1Q6IAA8 161 aa15.89■□□□□ 0.13
HMGB3-205ENST00000455596 SPAG8Q99932 426 aaPredicted RBP15.89■□□□□ 0.13
HMGB3-205ENST00000455596 TENM3Q9P273 2699 aa15.89■□□□□ 0.13
HMGB3-205ENST00000455596 STAB2Q8WWQ8 2551 aa15.88■□□□□ 0.13
HMGB3-205ENST00000455596 CCDC160A6NGH7 325 aa15.88■□□□□ 0.13
HMGB3-205ENST00000455596 TSPAN4O14817 238 aa15.88■□□□□ 0.13
HMGB3-205ENST00000455596 SELENOHQ8IZQ5 122 aaKnown RBP15.88■□□□□ 0.13
HMGB3-205ENST00000455596 DUSP18Q8NEJ0 188 aa15.88■□□□□ 0.13
HMGB3-205ENST00000455596 LHFPL5Q8TAF8 219 aa15.88■□□□□ 0.13
HMGB3-205ENST00000455596 SCGB3A2Q96PL1 93 aa15.88■□□□□ 0.13
HMGB3-205ENST00000455596 HIPK2Q9H2X6 1198 aa15.88■□□□□ 0.13
HMGB3-205ENST00000455596 EDA2RQ9HAV5 297 aa15.88■□□□□ 0.13
HMGB3-205ENST00000455596 YIF1AO95070 293 aa15.87■□□□□ 0.13
HMGB3-205ENST00000455596 RNASE2P10153 161 aaKnown RBP15.87■□□□□ 0.13
HMGB3-205ENST00000455596 CASC10Q5T4H9 136 aa15.87■□□□□ 0.13
HMGB3-205ENST00000455596 TMEM268Q5VZI3 342 aa15.87■□□□□ 0.13
HMGB3-205ENST00000455596 Q6ZRM9 215 aa15.87■□□□□ 0.13
HMGB3-205ENST00000455596 ZNF414Q96IQ9 312 aa15.87■□□□□ 0.13
HMGB3-205ENST00000455596 RETNQ9HD89 108 aa15.87■□□□□ 0.13
HMGB3-205ENST00000455596 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.87■□□□□ 0.13
HMGB3-205ENST00000455596 MCUBQ9NWR8 336 aa15.87■□□□□ 0.13
HMGB3-205ENST00000455596 HUWE1Q7Z6Z7 4374 aaKnown RBP15.87■□□□□ 0.13
HMGB3-205ENST00000455596 LYL1P12980 280 aa15.86■□□□□ 0.13
HMGB3-205ENST00000455596 NPBWR1P48145 328 aa15.86■□□□□ 0.13
HMGB3-205ENST00000455596 SPCS3P61009 180 aa15.86■□□□□ 0.13
HMGB3-205ENST00000455596 PVRIGQ6DKI7 326 aa15.86■□□□□ 0.13
HMGB3-205ENST00000455596 OR52E5Q8NH55 327 aa15.86■□□□□ 0.13
HMGB3-205ENST00000455596 OR10C1Q96KK4 312 aa15.86■□□□□ 0.13
HMGB3-205ENST00000455596 SMPXQ9UHP9 88 aa15.86■□□□□ 0.13
HMGB3-205ENST00000455596 KCNIP3Q9Y2W7 256 aa15.86■□□□□ 0.13
HMGB3-205ENST00000455596 IGHV7-4-1A0A0J9YVY3 117 aa15.85■□□□□ 0.13
HMGB3-205ENST00000455596 AARDQ4LEZ3 155 aa15.85■□□□□ 0.13
HMGB3-205ENST00000455596 GPR146Q96CH1 333 aa15.85■□□□□ 0.13
HMGB3-205ENST00000455596 CACNG5Q9UF02 275 aa15.85■□□□□ 0.13
HMGB3-205ENST00000455596 LOC102724200A0A096LPH7 203 aaPredicted RBP15.84■□□□□ 0.13
HMGB3-205ENST00000455596 S100A5P33763 92 aa15.84■□□□□ 0.13
HMGB3-205ENST00000455596 FAUP35544 74 aaKnown RBP15.84■□□□□ 0.13
HMGB3-205ENST00000455596 PYDC2Q56P42 97 aa15.84■□□□□ 0.13
HMGB3-205ENST00000455596 TMEM116Q8NCL8 245 aa15.84■□□□□ 0.13
HMGB3-205ENST00000455596 IL22RA2Q969J5 263 aa15.84■□□□□ 0.13
HMGB3-205ENST00000455596 TMEM230Q96A57 120 aa15.84■□□□□ 0.13
HMGB3-205ENST00000455596 GALNT14Q96FL9 552 aa15.84■□□□□ 0.13
HMGB3-205ENST00000455596 GGTLC1Q9BX51 225 aa15.84■□□□□ 0.13
HMGB3-205ENST00000455596 TMEM56-RWDD3S4R434 201 aa15.84■□□□□ 0.13
HMGB3-205ENST00000455596 TRAV14DV4A0A0A6YYC5 116 aa15.83■□□□□ 0.12
HMGB3-205ENST00000455596 CHEK1O14757 476 aa15.83■□□□□ 0.12
HMGB3-205ENST00000455596 OPRK1P41145 380 aa15.83■□□□□ 0.12
HMGB3-205ENST00000455596 TMEM187Q14656 261 aa15.83■□□□□ 0.12
HMGB3-205ENST00000455596 BSXQ3C1V8 233 aa15.83■□□□□ 0.12
HMGB3-205ENST00000455596 FAM110AQ9BQ89 295 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 144.9 ms