RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 MT-CO2P00403 227 aa12.24□□□□□ -0.45
UBE2D4-209ENST00000454428 ZNF688P0C7X2 276 aa12.24□□□□□ -0.45
UBE2D4-209ENST00000454428 FXYD4P59646 89 aa12.24□□□□□ -0.45
UBE2D4-209ENST00000454428 GNG2P59768 71 aa12.24□□□□□ -0.45
UBE2D4-209ENST00000454428 ACTL10Q5JWF8 245 aa12.24□□□□□ -0.45
UBE2D4-209ENST00000454428 DCANP1Q8TF63 244 aa12.24□□□□□ -0.45
UBE2D4-209ENST00000454428 GRAMD2BQ96HH9 432 aa12.24□□□□□ -0.45
UBE2D4-209ENST00000454428 MGLLQ99685 303 aa12.24□□□□□ -0.45
UBE2D4-209ENST00000454428 GINS3Q9BRX5 216 aa12.24□□□□□ -0.45
UBE2D4-209ENST00000454428 SCRT2Q9NQ03 307 aa12.24□□□□□ -0.45
UBE2D4-209ENST00000454428 A0A1B0GU03 582 aa12.23□□□□□ -0.45
UBE2D4-209ENST00000454428 SMIM30A4D0T7 59 aa12.23□□□□□ -0.45
UBE2D4-209ENST00000454428 EIF4EP06730 217 aaKnown RBP12.23□□□□□ -0.45
UBE2D4-209ENST00000454428 RAB3BP20337 219 aa12.23□□□□□ -0.45
UBE2D4-209ENST00000454428 RNF212Q495C1 297 aa12.23□□□□□ -0.45
UBE2D4-209ENST00000454428 AADACL3Q5VUY0 350 aa12.23□□□□□ -0.45
UBE2D4-209ENST00000454428 CADM3Q8N126 398 aa12.23□□□□□ -0.45
UBE2D4-209ENST00000454428 BEST4Q8NFU0 473 aa12.23□□□□□ -0.45
UBE2D4-209ENST00000454428 DUSP21Q9H596 190 aa12.23□□□□□ -0.45
UBE2D4-209ENST00000454428 PUS1Q9Y606 427 aaKnown RBP eCLIP12.23□□□□□ -0.45
UBE2D4-209ENST00000454428 VPS13BQ7Z7G8 4022 aa12.22□□□□□ -0.45
UBE2D4-209ENST00000454428 GNG7O60262 68 aa12.22□□□□□ -0.45
UBE2D4-209ENST00000454428 KRASP01116 189 aa12.22□□□□□ -0.45
UBE2D4-209ENST00000454428 NPY1RP25929 384 aa12.22□□□□□ -0.45
UBE2D4-209ENST00000454428 GNRHRP30968 328 aa12.22□□□□□ -0.45
UBE2D4-209ENST00000454428 G6PCP35575 357 aa12.22□□□□□ -0.45
UBE2D4-209ENST00000454428 ARPC4P59998 168 aa12.22□□□□□ -0.45
UBE2D4-209ENST00000454428 ERVK-16P61578 105 aa12.22□□□□□ -0.45
UBE2D4-209ENST00000454428 STXBP6Q8NFX7 210 aa12.22□□□□□ -0.45
UBE2D4-209ENST00000454428 FCAMRQ8WWV6 532 aa12.22□□□□□ -0.45
UBE2D4-209ENST00000454428 RCN1Q15293 331 aa12.21□□□□□ -0.45
UBE2D4-209ENST00000454428 OGFRL1Q5TC84 451 aaPredicted RBP12.21□□□□□ -0.45
UBE2D4-209ENST00000454428 TMEM17Q86X19 198 aa12.21□□□□□ -0.45
UBE2D4-209ENST00000454428 HOGA1Q86XE5 327 aa12.21□□□□□ -0.45
UBE2D4-209ENST00000454428 ZNF114Q8NC26 417 aa12.21□□□□□ -0.45
UBE2D4-209ENST00000454428 FAM210BQ96KR6 192 aa12.21□□□□□ -0.45
UBE2D4-209ENST00000454428 TMEM56Q96MV1 263 aa12.21□□□□□ -0.45
UBE2D4-209ENST00000454428 SCN3BQ9NY72 215 aa12.21□□□□□ -0.45
UBE2D4-209ENST00000454428 RLN1P04808 185 aa12.2□□□□□ -0.46
UBE2D4-209ENST00000454428 F2RP25116 425 aa12.2□□□□□ -0.46
UBE2D4-209ENST00000454428 LPAR6P43657 344 aa12.2□□□□□ -0.46
UBE2D4-209ENST00000454428 PINX1Q96BK5 328 aaKnown RBP12.2□□□□□ -0.46
UBE2D4-209ENST00000454428 RAB40CQ96S21 281 aa12.2□□□□□ -0.46
UBE2D4-209ENST00000454428 XCL2Q9UBD3 114 aa12.2□□□□□ -0.46
UBE2D4-209ENST00000454428 PRNDQ9UKY0 176 aa12.2□□□□□ -0.46
UBE2D4-209ENST00000454428 CASQ2O14958 399 aaPredicted RBP12.19□□□□□ -0.46
UBE2D4-209ENST00000454428 RGS10O43665 173 aa12.19□□□□□ -0.46
UBE2D4-209ENST00000454428 PGLYRP1O75594 196 aaPredicted RBP12.19□□□□□ -0.46
UBE2D4-209ENST00000454428 SNAPC5O75971 98 aa12.19□□□□□ -0.46
UBE2D4-209ENST00000454428 FCER2P06734 321 aa12.19□□□□□ -0.46
UBE2D4-209ENST00000454428 MYL9P24844 172 aa12.19□□□□□ -0.46
UBE2D4-209ENST00000454428 ZNF600Q6ZNG1 722 aa12.19□□□□□ -0.46
UBE2D4-209ENST00000454428 ZNF367Q7RTV3 350 aa12.19□□□□□ -0.46
UBE2D4-209ENST00000454428 SPART-AS1P0CW21 52 aa12.18□□□□□ -0.46
UBE2D4-209ENST00000454428 CRYBB3P26998 211 aa12.18□□□□□ -0.46
UBE2D4-209ENST00000454428 ZNF705AQ6ZN79 300 aaPredicted RBP12.18□□□□□ -0.46
UBE2D4-209ENST00000454428 TMEM231Q9H6L2 316 aa12.18□□□□□ -0.46
UBE2D4-209ENST00000454428 TRDV1A0A1B0GX56 115 aa12.17□□□□□ -0.46
UBE2D4-209ENST00000454428 ZNF705FA8MVS1 300 aaPredicted RBP12.17□□□□□ -0.46
UBE2D4-209ENST00000454428 TMEM50AO95807 157 aa12.17□□□□□ -0.46
UBE2D4-209ENST00000454428 ZNF705DP0CH99 300 aaPredicted RBP12.17□□□□□ -0.46
UBE2D4-209ENST00000454428 ZNF705BP0CI00 300 aaPredicted RBP12.17□□□□□ -0.46
UBE2D4-209ENST00000454428 P2RY1P47900 373 aa12.17□□□□□ -0.46
UBE2D4-209ENST00000454428 PPP5CP53041 499 aa12.17□□□□□ -0.46
UBE2D4-209ENST00000454428 EMP1P54849 157 aa12.17□□□□□ -0.46
UBE2D4-209ENST00000454428 C22orf42Q6IC83 251 aa12.17□□□□□ -0.46
UBE2D4-209ENST00000454428 NEU1Q99519 415 aa12.17□□□□□ -0.46
UBE2D4-209ENST00000454428 CCDC90BQ9GZT6 254 aa12.17□□□□□ -0.46
UBE2D4-209ENST00000454428 NDUFB11Q9NX14 153 aa12.17□□□□□ -0.46
UBE2D4-209ENST00000454428 FKBP11Q9NYL4 201 aa12.17□□□□□ -0.46
UBE2D4-209ENST00000454428 MRPL36Q9P0J6 103 aaKnown RBP12.17□□□□□ -0.46
UBE2D4-209ENST00000454428 DKK2Q9UBU2 259 aa12.17□□□□□ -0.46
UBE2D4-209ENST00000454428 TPRKBQ9Y3C4 175 aa12.17□□□□□ -0.46
UBE2D4-209ENST00000454428 SCGNO76038 276 aa12.16□□□□□ -0.46
UBE2D4-209ENST00000454428 NPPCP23582 126 aa12.16□□□□□ -0.46
UBE2D4-209ENST00000454428 PSMG4Q5JS54 123 aa12.16□□□□□ -0.46
UBE2D4-209ENST00000454428 PRSS48Q7RTY5 328 aa12.16□□□□□ -0.46
UBE2D4-209ENST00000454428 LGALS14Q8TCE9 139 aa12.16□□□□□ -0.46
UBE2D4-209ENST00000454428 MOB3AQ96BX8 217 aa12.16□□□□□ -0.46
UBE2D4-209ENST00000454428 A0A1W2PS18 150 aa12.15□□□□□ -0.46
UBE2D4-209ENST00000454428 NOTOA8MTQ0 251 aa12.15□□□□□ -0.46
UBE2D4-209ENST00000454428 NPBWR1P48145 328 aa12.15□□□□□ -0.46
UBE2D4-209ENST00000454428 PRCDQ00LT1 54 aa12.15□□□□□ -0.46
UBE2D4-209ENST00000454428 TMEM88Q6PEY1 159 aa12.15□□□□□ -0.46
UBE2D4-209ENST00000454428 TPRA1Q86W33 373 aa12.15□□□□□ -0.46
UBE2D4-209ENST00000454428 OR5AP2Q8NGF4 316 aa12.15□□□□□ -0.46
UBE2D4-209ENST00000454428 SLC25A38Q96DW6 304 aa12.15□□□□□ -0.46
UBE2D4-209ENST00000454428 C1QTNF4Q9BXJ3 329 aa12.15□□□□□ -0.46
UBE2D4-209ENST00000454428 RHBDL2Q9NX52 303 aa12.15□□□□□ -0.46
UBE2D4-209ENST00000454428 TRAV18A0A075B6X5 111 aa12.14□□□□□ -0.47
UBE2D4-209ENST00000454428 H3BMM0 161 aa12.14□□□□□ -0.47
UBE2D4-209ENST00000454428 FGF9P31371 208 aaPredicted RBP12.14□□□□□ -0.47
UBE2D4-209ENST00000454428 DHRS2Q13268 280 aa12.14□□□□□ -0.47
UBE2D4-209ENST00000454428 FAM222AQ5U5X8 452 aa12.14□□□□□ -0.47
UBE2D4-209ENST00000454428 SEC22AQ96IW7 307 aa12.14□□□□□ -0.47
UBE2D4-209ENST00000454428 METTL26Q96S19 204 aa12.14□□□□□ -0.47
UBE2D4-209ENST00000454428 NIPSNAP3BQ9BS92 247 aa12.14□□□□□ -0.47
UBE2D4-209ENST00000454428 DAPK2Q9UIK4 370 aa12.14□□□□□ -0.47
UBE2D4-209ENST00000454428 U3KQE9 123 aa12.14□□□□□ -0.47
UBE2D4-209ENST00000454428 HELTA6NFD8 242 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms