RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 TMEM187Q14656 261 aa4.34□□□□□ -1.71
HLA-DPA3-207ENST00000454398 POU2AF1Q16633 256 aa4.34□□□□□ -1.71
HLA-DPA3-207ENST00000454398 SPSB3Q6PJ21 355 aa4.34□□□□□ -1.71
HLA-DPA3-207ENST00000454398 STXBP6Q8NFX7 210 aa4.34□□□□□ -1.71
HLA-DPA3-207ENST00000454398 OR1L8Q8NGR8 309 aa4.34□□□□□ -1.71
HLA-DPA3-207ENST00000454398 PPP1R14BQ96C90 147 aa4.34□□□□□ -1.71
HLA-DPA3-207ENST00000454398 DGCR14Q96DF8 476 aaKnown RBP4.34□□□□□ -1.71
HLA-DPA3-207ENST00000454398 DCSTAMPQ9H295 470 aa4.34□□□□□ -1.71
HLA-DPA3-207ENST00000454398 TXNL4BQ9NX01 149 aaKnown RBP4.34□□□□□ -1.71
HLA-DPA3-207ENST00000454398 COMMD9Q9P000 198 aa4.34□□□□□ -1.71
HLA-DPA3-207ENST00000454398 THYN1Q9P016 225 aa4.34□□□□□ -1.71
HLA-DPA3-207ENST00000454398 MRPL36Q9P0J6 103 aaKnown RBP4.34□□□□□ -1.71
HLA-DPA3-207ENST00000454398 PAIP2BQ9ULR5 123 aaKnown RBP4.34□□□□□ -1.71
HLA-DPA3-207ENST00000454398 RAB26Q9ULW5 256 aa4.34□□□□□ -1.71
HLA-DPA3-207ENST00000454398 X6R8D5 127 aa4.34□□□□□ -1.71
HLA-DPA3-207ENST00000454398 NACAE9PAV3 2078 aa4.33□□□□□ -1.72
HLA-DPA3-207ENST00000454398 A0A1B0GU03 582 aa4.33□□□□□ -1.72
HLA-DPA3-207ENST00000454398 PRSS29PA6NIE9 313 aa4.33□□□□□ -1.72
HLA-DPA3-207ENST00000454398 C15orf61A6NNL5 157 aa4.33□□□□□ -1.72
HLA-DPA3-207ENST00000454398 I3L2K1 104 aa4.33□□□□□ -1.72
HLA-DPA3-207ENST00000454398 PMP2P02689 132 aa4.33□□□□□ -1.72
HLA-DPA3-207ENST00000454398 GNRHRP30968 328 aa4.33□□□□□ -1.72
HLA-DPA3-207ENST00000454398 PPP5CP53041 499 aa4.33□□□□□ -1.72
HLA-DPA3-207ENST00000454398 KCTD21Q4G0X4 260 aa4.33□□□□□ -1.72
HLA-DPA3-207ENST00000454398 RNASE12Q5GAN4 147 aaKnown RBP4.33□□□□□ -1.72
HLA-DPA3-207ENST00000454398 ACTL10Q5JWF8 245 aa4.33□□□□□ -1.72
HLA-DPA3-207ENST00000454398 IDNKQ5T6J7 187 aa4.33□□□□□ -1.72
HLA-DPA3-207ENST00000454398 FAM90A2PQ658T7 463 aa4.33□□□□□ -1.72
HLA-DPA3-207ENST00000454398 TOMM20LQ6UXN7 152 aa4.33□□□□□ -1.72
HLA-DPA3-207ENST00000454398 TRPT1Q86TN4 253 aaKnown RBP4.33□□□□□ -1.72
HLA-DPA3-207ENST00000454398 HOGA1Q86XE5 327 aa4.33□□□□□ -1.72
HLA-DPA3-207ENST00000454398 MRGPRFQ96AM1 343 aa4.33□□□□□ -1.72
HLA-DPA3-207ENST00000454398 OR10C1Q96KK4 312 aa4.33□□□□□ -1.72
HLA-DPA3-207ENST00000454398 ZNF2Q9BSG1 426 aaPredicted RBP4.33□□□□□ -1.72
HLA-DPA3-207ENST00000454398 AUNIPQ9H7T9 357 aa4.33□□□□□ -1.72
HLA-DPA3-207ENST00000454398 ZFAND3Q9H8U3 227 aa4.33□□□□□ -1.72
HLA-DPA3-207ENST00000454398 PLEKHA2Q9HB19 425 aa4.33□□□□□ -1.72
HLA-DPA3-207ENST00000454398 IFT46Q9NQC8 304 aa4.33□□□□□ -1.72
HLA-DPA3-207ENST00000454398 RSL24D1Q9UHA3 163 aaKnown RBP4.33□□□□□ -1.72
HLA-DPA3-207ENST00000454398 PUS1Q9Y606 427 aaKnown RBP eCLIP4.33□□□□□ -1.72
HLA-DPA3-207ENST00000454398 TRAV14DV4A0A0A6YYC5 116 aa4.32□□□□□ -1.72
HLA-DPA3-207ENST00000454398 K7EMT4 169 aa4.32□□□□□ -1.72
HLA-DPA3-207ENST00000454398 DNASE2O00115 360 aaPredicted RBP4.32□□□□□ -1.72
HLA-DPA3-207ENST00000454398 CYB5BO43169 146 aa4.32□□□□□ -1.72
HLA-DPA3-207ENST00000454398 GNG7O60262 68 aa4.32□□□□□ -1.72
HLA-DPA3-207ENST00000454398 MRPS14O60783 128 aaKnown RBP4.32□□□□□ -1.72
HLA-DPA3-207ENST00000454398 NOL3O60936 208 aaKnown RBP4.32□□□□□ -1.72
HLA-DPA3-207ENST00000454398 PGLYRP1O75594 196 aaPredicted RBP4.32□□□□□ -1.72
HLA-DPA3-207ENST00000454398 IGKV1-39P01597 117 aa4.32□□□□□ -1.72
HLA-DPA3-207ENST00000454398 AMBPP02760 352 aa4.32□□□□□ -1.72
HLA-DPA3-207ENST00000454398 IGKV1D-39P04432 117 aa4.32□□□□□ -1.72
HLA-DPA3-207ENST00000454398 MED14OSP0DP75 135 aa4.32□□□□□ -1.72
HLA-DPA3-207ENST00000454398 EMP1P54849 157 aa4.32□□□□□ -1.72
HLA-DPA3-207ENST00000454398 RELQ04864 619 aaPredicted RBP4.32□□□□□ -1.72
HLA-DPA3-207ENST00000454398 ARL6IP1Q15041 203 aa4.32□□□□□ -1.72
HLA-DPA3-207ENST00000454398 C12orf74Q32Q52 190 aa4.32□□□□□ -1.72
HLA-DPA3-207ENST00000454398 UBE2UQ5VVX9 321 aa4.32□□□□□ -1.72
HLA-DPA3-207ENST00000454398 CLVS1Q8IUQ0 354 aaPredicted RBP4.32□□□□□ -1.72
HLA-DPA3-207ENST00000454398 STHQ8IWL8 128 aa4.32□□□□□ -1.72
HLA-DPA3-207ENST00000454398 TSPAN14Q8NG11 270 aa4.32□□□□□ -1.72
HLA-DPA3-207ENST00000454398 OR1P1Q8NH06 330 aa4.32□□□□□ -1.72
HLA-DPA3-207ENST00000454398 MOB3AQ96BX8 217 aa4.32□□□□□ -1.72
HLA-DPA3-207ENST00000454398 CMTM3Q96MX0 182 aa4.32□□□□□ -1.72
HLA-DPA3-207ENST00000454398 SRSF8Q9BRL6 282 aaKnown RBP4.32□□□□□ -1.72
HLA-DPA3-207ENST00000454398 CENPOQ9BU64 300 aa4.32□□□□□ -1.72
HLA-DPA3-207ENST00000454398 NXF2Q9GZY0 626 aaKnown RBP4.32□□□□□ -1.72
HLA-DPA3-207ENST00000454398 RBM38Q9H0Z9 239 aaKnown RBP4.32□□□□□ -1.72
HLA-DPA3-207ENST00000454398 TMEM14BQ9NUH8 114 aa4.32□□□□□ -1.72
HLA-DPA3-207ENST00000454398 DEFB131BA0A096LNP1 70 aa4.31□□□□□ -1.72
HLA-DPA3-207ENST00000454398 TRAV10A0A0B4J240 114 aa4.31□□□□□ -1.72
HLA-DPA3-207ENST00000454398 SNAPC5O75971 98 aa4.31□□□□□ -1.72
HLA-DPA3-207ENST00000454398 IGKV3-20P01619 116 aa4.31□□□□□ -1.72
HLA-DPA3-207ENST00000454398 EIF4EP06730 217 aaKnown RBP4.31□□□□□ -1.72
HLA-DPA3-207ENST00000454398 HTN3P15516 51 aa4.31□□□□□ -1.72
HLA-DPA3-207ENST00000454398 PI3P19957 117 aa4.31□□□□□ -1.72
HLA-DPA3-207ENST00000454398 F2RP25116 425 aa4.31□□□□□ -1.72
HLA-DPA3-207ENST00000454398 HLA-DMAP28067 261 aa4.31□□□□□ -1.72
HLA-DPA3-207ENST00000454398 HRH1P35367 487 aa4.31□□□□□ -1.72
HLA-DPA3-207ENST00000454398 P2RY1P47900 373 aa4.31□□□□□ -1.72
HLA-DPA3-207ENST00000454398 MFAP4P55083 255 aa4.31□□□□□ -1.72
HLA-DPA3-207ENST00000454398 FXYD7P58549 80 aa4.31□□□□□ -1.72
HLA-DPA3-207ENST00000454398 MSMO1Q15800 293 aa4.31□□□□□ -1.72
HLA-DPA3-207ENST00000454398 NEDD8Q15843 81 aa4.31□□□□□ -1.72
HLA-DPA3-207ENST00000454398 PSMG4Q5JS54 123 aa4.31□□□□□ -1.72
HLA-DPA3-207ENST00000454398 THOC7Q6I9Y2 204 aaKnown RBP4.31□□□□□ -1.72
HLA-DPA3-207ENST00000454398 GPR141Q7Z602 305 aa4.31□□□□□ -1.72
HLA-DPA3-207ENST00000454398 TBC1D26Q86UD7 250 aa4.31□□□□□ -1.72
HLA-DPA3-207ENST00000454398 CROCCP3Q8IVE0 287 aa4.31□□□□□ -1.72
HLA-DPA3-207ENST00000454398 OR5AP2Q8NGF4 316 aa4.31□□□□□ -1.72
HLA-DPA3-207ENST00000454398 OR5H2Q8NGV7 314 aa4.31□□□□□ -1.72
HLA-DPA3-207ENST00000454398 VSIRQ9H7M9 311 aa4.31□□□□□ -1.72
HLA-DPA3-207ENST00000454398 XCL2Q9UBD3 114 aa4.31□□□□□ -1.72
HLA-DPA3-207ENST00000454398 PRNDQ9UKY0 176 aa4.31□□□□□ -1.72
HLA-DPA3-207ENST00000454398 TBC1D24Q9ULP9 559 aa4.31□□□□□ -1.72
HLA-DPA3-207ENST00000454398 IGHV3OR16-12A0A075B7B8 117 aa4.3□□□□□ -1.72
HLA-DPA3-207ENST00000454398 ZNF705EA8MWA4 302 aaPredicted RBP4.3□□□□□ -1.72
HLA-DPA3-207ENST00000454398 C11orf94C9JXX5 98 aa4.3□□□□□ -1.72
HLA-DPA3-207ENST00000454398 K7EQG2 157 aa4.3□□□□□ -1.72
HLA-DPA3-207ENST00000454398 M0QYG6 137 aa4.3□□□□□ -1.72
HLA-DPA3-207ENST00000454398 GPR31O00270 319 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms