RNA–Protein interactions for RNA: ENST00000453260.6

TNFRSF25-207, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 2

Gene TNFRSF25, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-207ENST00000453260 IGKV1-39P01597 117 aa13.62□□□□□ -0.23
TNFRSF25-207ENST00000453260 IGKV1D-39P04432 117 aa13.62□□□□□ -0.23
TNFRSF25-207ENST00000453260 PGAM2P15259 253 aa13.62□□□□□ -0.23
TNFRSF25-207ENST00000453260 ATF4P18848 351 aaPredicted RBP13.62□□□□□ -0.23
TNFRSF25-207ENST00000453260 NPBWR1P48145 328 aa13.62□□□□□ -0.23
TNFRSF25-207ENST00000453260 DUSP18Q8NEJ0 188 aa13.62□□□□□ -0.23
TNFRSF25-207ENST00000453260 AP3S1Q92572 193 aa13.62□□□□□ -0.23
TNFRSF25-207ENST00000453260 MAP6D1Q9H9H5 199 aa13.62□□□□□ -0.23
TNFRSF25-207ENST00000453260 M0QYG6 137 aa13.61□□□□□ -0.23
TNFRSF25-207ENST00000453260 SUB1P53999 127 aaKnown RBP eCLIP13.61□□□□□ -0.23
TNFRSF25-207ENST00000453260 RND3P61587 244 aa13.61□□□□□ -0.23
TNFRSF25-207ENST00000453260 RNASE10Q5GAN6 216 aaKnown RBP13.61□□□□□ -0.23
TNFRSF25-207ENST00000453260 PDCD10Q9BUL8 212 aa13.61□□□□□ -0.23
TNFRSF25-207ENST00000453260 KLK5Q9Y337 293 aaPredicted RBP13.61□□□□□ -0.23
TNFRSF25-207ENST00000453260 PLECQ15149 4684 aaKnown RBP13.61□□□□□ -0.23
TNFRSF25-207ENST00000453260 TFPI2P48307 235 aa13.6□□□□□ -0.23
TNFRSF25-207ENST00000453260 CEMP1Q6PRD7 247 aaPredicted RBP13.6□□□□□ -0.23
TNFRSF25-207ENST00000453260 APRG1Q8IVJ8 170 aa13.6□□□□□ -0.23
TNFRSF25-207ENST00000453260 ARRDC1Q8N5I2 433 aa13.6□□□□□ -0.23
TNFRSF25-207ENST00000453260 C15orf40Q8WUR7 153 aa13.6□□□□□ -0.23
TNFRSF25-207ENST00000453260 LINC00476Q8WZB0 136 aa13.6□□□□□ -0.23
TNFRSF25-207ENST00000453260 CSTL1Q9H114 145 aa13.6□□□□□ -0.23
TNFRSF25-207ENST00000453260 HYDINQ4G0P3 5121 aa13.59□□□□□ -0.23
TNFRSF25-207ENST00000453260 IGKV3-7A0A075B6H7 116 aa13.59□□□□□ -0.23
TNFRSF25-207ENST00000453260 IGHV3-49A0A0A0MS15 119 aa13.59□□□□□ -0.23
TNFRSF25-207ENST00000453260 MPTX1A8MV57 137 aa13.59□□□□□ -0.23
TNFRSF25-207ENST00000453260 LY6G6CO95867 125 aa13.59□□□□□ -0.23
TNFRSF25-207ENST00000453260 IFNA17P01571 189 aa13.59□□□□□ -0.23
TNFRSF25-207ENST00000453260 IGHV3-48P01763 117 aa13.59□□□□□ -0.23
TNFRSF25-207ENST00000453260 TBPP20226 339 aa13.59□□□□□ -0.23
TNFRSF25-207ENST00000453260 AKR1C2P52895 323 aa13.59□□□□□ -0.23
TNFRSF25-207ENST00000453260 PIGPP57054 158 aa13.59□□□□□ -0.23
TNFRSF25-207ENST00000453260 SLC35G3Q8N808 338 aa13.59□□□□□ -0.23
TNFRSF25-207ENST00000453260 ZFAND1Q8TCF1 268 aa13.59□□□□□ -0.23
TNFRSF25-207ENST00000453260 KLK11Q9UBX7 282 aa13.59□□□□□ -0.23
TNFRSF25-207ENST00000453260 CORTO00230 105 aa13.58□□□□□ -0.24
TNFRSF25-207ENST00000453260 GATAD1Q8WUU5 269 aa13.58□□□□□ -0.24
TNFRSF25-207ENST00000453260 ENY2Q9NPA8 101 aa13.58□□□□□ -0.24
TNFRSF25-207ENST00000453260 COPZ2Q9P299 210 aa13.58□□□□□ -0.24
TNFRSF25-207ENST00000453260 C3orf85A0A1B0GTC6 90 aa13.57□□□□□ -0.24
TNFRSF25-207ENST00000453260 INS-IGF2F8WCM5 200 aa13.57□□□□□ -0.24
TNFRSF25-207ENST00000453260 DNASE2O00115 360 aaPredicted RBP13.57□□□□□ -0.24
TNFRSF25-207ENST00000453260 SCGB2A1O75556 95 aa13.57□□□□□ -0.24
TNFRSF25-207ENST00000453260 CD3DP04234 171 aa13.57□□□□□ -0.24
TNFRSF25-207ENST00000453260 ZNF182P17025 639 aaPredicted RBP13.57□□□□□ -0.24
TNFRSF25-207ENST00000453260 PI3P19957 117 aa13.57□□□□□ -0.24
TNFRSF25-207ENST00000453260 TRIM16LQ309B1 348 aa13.57□□□□□ -0.24
TNFRSF25-207ENST00000453260 SPINK9Q5DT21 86 aa13.57□□□□□ -0.24
TNFRSF25-207ENST00000453260 RNASE12Q5GAN4 147 aaKnown RBP13.57□□□□□ -0.24
TNFRSF25-207ENST00000453260 FAM90A2PQ658T7 463 aa13.57□□□□□ -0.24
TNFRSF25-207ENST00000453260 TOMM20LQ6UXN7 152 aa13.57□□□□□ -0.24
TNFRSF25-207ENST00000453260 ZNF600Q6ZNG1 722 aa13.57□□□□□ -0.24
TNFRSF25-207ENST00000453260 TCF24Q7RTU0 167 aa13.57□□□□□ -0.24
TNFRSF25-207ENST00000453260 LHFPL1Q86WI0 220 aa13.57□□□□□ -0.24
TNFRSF25-207ENST00000453260 GBGT1Q8N5D6 347 aa13.57□□□□□ -0.24
TNFRSF25-207ENST00000453260 CCDC71LQ8N9Z2 235 aa13.57□□□□□ -0.24
TNFRSF25-207ENST00000453260 RRNAD1Q96FB5 475 aaKnown RBP13.57□□□□□ -0.24
TNFRSF25-207ENST00000453260 TMEM231Q9H6L2 316 aa13.57□□□□□ -0.24
TNFRSF25-207ENST00000453260 IGHV3OR16-13A0A075B7E8 117 aa13.56□□□□□ -0.24
TNFRSF25-207ENST00000453260 IGHV3-74A0A0B4J1X5 117 aa13.56□□□□□ -0.24
TNFRSF25-207ENST00000453260 A0A0B4J293 547 aa13.56□□□□□ -0.24
TNFRSF25-207ENST00000453260 ST8SIA3O43173 380 aa13.56□□□□□ -0.24
TNFRSF25-207ENST00000453260 B3GALNT1O75752 331 aa13.56□□□□□ -0.24
TNFRSF25-207ENST00000453260 IGKV1-5P01602 117 aa13.56□□□□□ -0.24
TNFRSF25-207ENST00000453260 RPL11P62913 178 aaKnown RBP13.56□□□□□ -0.24
TNFRSF25-207ENST00000453260 EWSR1Q01844 656 aaKnown RBP eCLIP13.56□□□□□ -0.24
TNFRSF25-207ENST00000453260 IZUMO4Q1ZYL8 232 aa13.56□□□□□ -0.24
TNFRSF25-207ENST00000453260 OR52I2Q8NH67 350 aa13.56□□□□□ -0.24
TNFRSF25-207ENST00000453260 TERB2Q8NHR7 220 aa13.56□□□□□ -0.24
TNFRSF25-207ENST00000453260 ZNF414Q96IQ9 312 aa13.56□□□□□ -0.24
TNFRSF25-207ENST00000453260 TP53RKQ96S44 253 aa13.56□□□□□ -0.24
TNFRSF25-207ENST00000453260 RARRES2Q99969 163 aa13.56□□□□□ -0.24
TNFRSF25-207ENST00000453260 EXTL2Q9UBQ6 330 aa13.56□□□□□ -0.24
TNFRSF25-207ENST00000453260 MTFP1Q9UDX5 166 aa13.56□□□□□ -0.24
TNFRSF25-207ENST00000453260 PUS1Q9Y606 427 aaKnown RBP eCLIP13.56□□□□□ -0.24
TNFRSF25-207ENST00000453260 BIRC6Q9NR09 4857 aa13.56□□□□□ -0.24
TNFRSF25-207ENST00000453260 A0A1W2PS18 150 aa13.55□□□□□ -0.24
TNFRSF25-207ENST00000453260 DFFBO76075 338 aa13.55□□□□□ -0.24
TNFRSF25-207ENST00000453260 TMEM50AO95807 157 aa13.55□□□□□ -0.24
TNFRSF25-207ENST00000453260 RNASE11Q8TAA1 199 aaKnown RBP13.55□□□□□ -0.24
TNFRSF25-207ENST00000453260 ST8SIA2Q92186 375 aa13.55□□□□□ -0.24
TNFRSF25-207ENST00000453260 VSIRQ9H7M9 311 aa13.55□□□□□ -0.24
TNFRSF25-207ENST00000453260 ALMS1Q8TCU4 4167 aa13.54□□□□□ -0.24
TNFRSF25-207ENST00000453260 P0C879 139 aa13.54□□□□□ -0.24
TNFRSF25-207ENST00000453260 NPPCP23582 126 aa13.54□□□□□ -0.24
TNFRSF25-207ENST00000453260 ETV6P41212 452 aa13.54□□□□□ -0.24
TNFRSF25-207ENST00000453260 HOXA1P49639 335 aaPredicted RBP13.54□□□□□ -0.24
TNFRSF25-207ENST00000453260 TAS2R19P59542 299 aa13.54□□□□□ -0.24
TNFRSF25-207ENST00000453260 ZNF124Q15973 351 aa13.54□□□□□ -0.24
TNFRSF25-207ENST00000453260 SCGB2B2Q4G0G5 96 aa13.54□□□□□ -0.24
TNFRSF25-207ENST00000453260 TMEM229BQ8NBD8 167 aa13.54□□□□□ -0.24
TNFRSF25-207ENST00000453260 MS4A6AQ9H2W1 248 aa13.54□□□□□ -0.24
TNFRSF25-207ENST00000453260 TRAV2A0A0B4J234 112 aa13.53□□□□□ -0.24
TNFRSF25-207ENST00000453260 RAB3DO95716 219 aa13.53□□□□□ -0.24
TNFRSF25-207ENST00000453260 PPP5CP53041 499 aa13.53□□□□□ -0.24
TNFRSF25-207ENST00000453260 PVRIGQ6DKI7 326 aa13.53□□□□□ -0.24
TNFRSF25-207ENST00000453260 NARS2Q96I59 477 aaKnown RBP13.53□□□□□ -0.24
TNFRSF25-207ENST00000453260 ABHD1Q96SE0 405 aa13.53□□□□□ -0.24
TNFRSF25-207ENST00000453260 GABARAPO95166 117 aa13.52□□□□□ -0.25
TNFRSF25-207ENST00000453260 CD74P04233 296 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms