RNA–Protein interactions for RNA: ENST00000452776.1

SMCO1-202, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

TSL 1 (best)

Gene SMCO1, Length 1,846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-202ENST00000452776 NTF4P34130 210 aa6.9□□□□□ -1.3
SMCO1-202ENST00000452776 CAMPP49913 170 aa6.9□□□□□ -1.3
SMCO1-202ENST00000452776 PLGLB1Q02325 96 aa6.9□□□□□ -1.3
SMCO1-202ENST00000452776 WFDC2Q14508 124 aa6.9□□□□□ -1.3
SMCO1-202ENST00000452776 DEFB110Q30KQ9 67 aa6.9□□□□□ -1.3
SMCO1-202ENST00000452776 ABHD17BQ5VST6 288 aa6.9□□□□□ -1.3
SMCO1-202ENST00000452776 RNF138Q8WVD3 245 aa6.9□□□□□ -1.3
SMCO1-202ENST00000452776 IL1F10Q8WWZ1 152 aa6.9□□□□□ -1.3
SMCO1-202ENST00000452776 NANOS1Q8WY41 292 aaKnown RBP6.9□□□□□ -1.3
SMCO1-202ENST00000452776 SNRNP40Q96DI7 357 aaKnown RBP6.9□□□□□ -1.3
SMCO1-202ENST00000452776 HSD17B10Q99714 261 aaKnown RBP6.9□□□□□ -1.3
SMCO1-202ENST00000452776 CITED2Q99967 270 aaPredicted RBP6.9□□□□□ -1.3
SMCO1-202ENST00000452776 TM2D2Q9BX73 214 aa6.9□□□□□ -1.3
SMCO1-202ENST00000452776 PRDM14Q9GZV8 571 aa6.9□□□□□ -1.3
SMCO1-202ENST00000452776 GCM1Q9NP62 436 aa6.9□□□□□ -1.3
SMCO1-202ENST00000452776 DEPPQ9NTK1 212 aa6.9□□□□□ -1.3
SMCO1-202ENST00000452776 AP5S1Q9NUS5 200 aa6.9□□□□□ -1.3
SMCO1-202ENST00000452776 HILPDAQ9Y5L2 63 aa6.9□□□□□ -1.3
SMCO1-202ENST00000452776 LINC00312Q9Y6C7 94 aa6.9□□□□□ -1.3
SMCO1-202ENST00000452776 HLA-DRB4X5D2U9 266 aa6.9□□□□□ -1.3
SMCO1-202ENST00000452776 GAGE12JA6NER3 117 aa6.9□□□□□ -1.31
SMCO1-202ENST00000452776 SLC31A1O15431 190 aa6.9□□□□□ -1.31
SMCO1-202ENST00000452776 EFNA2O43921 213 aa6.9□□□□□ -1.31
SMCO1-202ENST00000452776 GAGE7O76087 117 aa6.9□□□□□ -1.31
SMCO1-202ENST00000452776 APOMO95445 188 aa6.9□□□□□ -1.31
SMCO1-202ENST00000452776 CER1O95813 267 aa6.9□□□□□ -1.31
SMCO1-202ENST00000452776 GAGE12FP0CL80 117 aa6.9□□□□□ -1.31
SMCO1-202ENST00000452776 GAGE12GP0CL81 117 aa6.9□□□□□ -1.31
SMCO1-202ENST00000452776 GAGE12IP0CL82 117 aa6.9□□□□□ -1.31
SMCO1-202ENST00000452776 GABRG2P18507 467 aa6.9□□□□□ -1.31
SMCO1-202ENST00000452776 VDAC2P45880 294 aaPredicted RBP6.9□□□□□ -1.31
SMCO1-202ENST00000452776 FASLGP48023 281 aa6.9□□□□□ -1.31
SMCO1-202ENST00000452776 FOXI1Q12951 378 aa6.9□□□□□ -1.31
SMCO1-202ENST00000452776 GAGE4Q13068 117 aa6.9□□□□□ -1.31
SMCO1-202ENST00000452776 Q8IYB0 196 aa6.9□□□□□ -1.31
SMCO1-202ENST00000452776 STPG3Q8N7X2 389 aa6.9□□□□□ -1.31
SMCO1-202ENST00000452776 BADQ92934 168 aa6.9□□□□□ -1.31
SMCO1-202ENST00000452776 TSACCQ96A04 125 aaPredicted RBP6.9□□□□□ -1.31
SMCO1-202ENST00000452776 C1QTNF5Q9BXJ0 243 aa6.9□□□□□ -1.31
SMCO1-202ENST00000452776 C1QTNF4Q9BXJ3 329 aa6.9□□□□□ -1.31
SMCO1-202ENST00000452776 IL23AQ9NPF7 189 aa6.9□□□□□ -1.31
SMCO1-202ENST00000452776 ZNF355PQ9NSJ1 428 aa6.9□□□□□ -1.31
SMCO1-202ENST00000452776 CACNA1IQ9P0X4 2223 aa6.89□□□□□ -1.31
SMCO1-202ENST00000452776 TRGV8A0A0C4DH27 118 aa6.89□□□□□ -1.31
SMCO1-202ENST00000452776 MANSC4A6NHS7 340 aaPredicted RBP6.89□□□□□ -1.31
SMCO1-202ENST00000452776 ARL4DP49703 201 aa6.89□□□□□ -1.31
SMCO1-202ENST00000452776 ETDBQ3ZM63 59 aa6.89□□□□□ -1.31
SMCO1-202ENST00000452776 Q6P435 159 aa6.89□□□□□ -1.31
SMCO1-202ENST00000452776 RBPMS2Q6ZRY4 209 aaKnown RBP6.89□□□□□ -1.31
SMCO1-202ENST00000452776 DTX1Q86Y01 620 aa6.89□□□□□ -1.31
SMCO1-202ENST00000452776 BCL6BQ8N143 479 aaPredicted RBP6.89□□□□□ -1.31
SMCO1-202ENST00000452776 CCL4L1Q8NHW4 92 aa6.89□□□□□ -1.31
SMCO1-202ENST00000452776 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.89□□□□□ -1.31
SMCO1-202ENST00000452776 NEU4Q8WWR8 484 aaPredicted RBP6.89□□□□□ -1.31
SMCO1-202ENST00000452776 CACNG8Q8WXS5 425 aa6.89□□□□□ -1.31
SMCO1-202ENST00000452776 TMEM133Q9H2Q1 129 aa6.89□□□□□ -1.31
SMCO1-202ENST00000452776 HIF1ANQ9NWT6 349 aa6.89□□□□□ -1.31
SMCO1-202ENST00000452776 SPANXCQ9NY87 97 aa6.89□□□□□ -1.31
SMCO1-202ENST00000452776 DLL3Q9NYJ7 618 aa6.89□□□□□ -1.31
SMCO1-202ENST00000452776 ZNF492Q9P255 531 aa6.89□□□□□ -1.31
SMCO1-202ENST00000452776 UFC1Q9Y3C8 167 aa6.89□□□□□ -1.31
SMCO1-202ENST00000452776 TMEM8BA6NDV4 472 aa6.88□□□□□ -1.31
SMCO1-202ENST00000452776 IGLL5B9A064 214 aa6.88□□□□□ -1.31
SMCO1-202ENST00000452776 PRSS46E5RG02 174 aa6.88□□□□□ -1.31
SMCO1-202ENST00000452776 DNPH1O43598 174 aa6.88□□□□□ -1.31
SMCO1-202ENST00000452776 FOXH1O75593 365 aa6.88□□□□□ -1.31
SMCO1-202ENST00000452776 C8orf88P0DMB2 117 aa6.88□□□□□ -1.31
SMCO1-202ENST00000452776 DEFA4P12838 97 aa6.88□□□□□ -1.31
SMCO1-202ENST00000452776 FCGR2BP31994 310 aaPredicted RBP6.88□□□□□ -1.31
SMCO1-202ENST00000452776 RPL32P62910 135 aaKnown RBP6.88□□□□□ -1.31
SMCO1-202ENST00000452776 ZXDAP98168 799 aa6.88□□□□□ -1.31
SMCO1-202ENST00000452776 LYRM7Q5U5X0 104 aa6.88□□□□□ -1.31
SMCO1-202ENST00000452776 SPATA31B1PQ5VZV4 182 aa6.88□□□□□ -1.31
SMCO1-202ENST00000452776 TRAT1Q6PIZ9 186 aa6.88□□□□□ -1.31
SMCO1-202ENST00000452776 ZNF497Q6ZNH5 498 aa6.88□□□□□ -1.31
SMCO1-202ENST00000452776 Q6ZUT4 128 aa6.88□□□□□ -1.31
SMCO1-202ENST00000452776 LINC00173Q6ZV60 143 aa6.88□□□□□ -1.31
SMCO1-202ENST00000452776 FAM214BQ7L5A3 538 aa6.88□□□□□ -1.31
SMCO1-202ENST00000452776 ZC2HC1AQ96GY0 325 aa6.88□□□□□ -1.31
SMCO1-202ENST00000452776 RPP21Q9H633 154 aaKnown RBP6.88□□□□□ -1.31
SMCO1-202ENST00000452776 MBNL3Q9NUK0 354 aaKnown RBP6.88□□□□□ -1.31
SMCO1-202ENST00000452776 KLRF1Q9NZS2 232 aa6.88□□□□□ -1.31
SMCO1-202ENST00000452776 AMMECR1Q9Y4X0 333 aaPredicted RBP6.88□□□□□ -1.31
SMCO1-202ENST00000452776 RALGAPA1Q6GYQ0 2036 aa6.88□□□□□ -1.31
SMCO1-202ENST00000452776 PHF3Q92576 2039 aaKnown RBP6.88□□□□□ -1.31
SMCO1-202ENST00000452776 TRAV24A0A0B4J272 114 aa6.87□□□□□ -1.31
SMCO1-202ENST00000452776 A0A1B0GWB2 263 aa6.87□□□□□ -1.31
SMCO1-202ENST00000452776 ERVK-16P61578 105 aa6.87□□□□□ -1.31
SMCO1-202ENST00000452776 HHEXQ03014 270 aa6.87□□□□□ -1.31
SMCO1-202ENST00000452776 SRYQ05066 204 aa6.87□□□□□ -1.31
SMCO1-202ENST00000452776 ZNF816Q0VGE8 651 aaPredicted RBP6.87□□□□□ -1.31
SMCO1-202ENST00000452776 EIF4EBP1Q13541 118 aaPredicted RBP6.87□□□□□ -1.31
SMCO1-202ENST00000452776 GAB4Q2WGN9 574 aa6.87□□□□□ -1.31
SMCO1-202ENST00000452776 NRN1LQ496H8 165 aa6.87□□□□□ -1.31
SMCO1-202ENST00000452776 PPP1R32Q7Z5V6 425 aa6.87□□□□□ -1.31
SMCO1-202ENST00000452776 MRPL43Q8N983 215 aaKnown RBP6.87□□□□□ -1.31
SMCO1-202ENST00000452776 PRSS3P2Q8NHM4 247 aa6.87□□□□□ -1.31
SMCO1-202ENST00000452776 FAM168AQ92567 244 aa6.87□□□□□ -1.31
SMCO1-202ENST00000452776 DAZAP1Q96EP5 407 aaKnown RBP6.87□□□□□ -1.31
SMCO1-202ENST00000452776 COQ2Q96H96 371 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 518.4 ms