RNA–Protein interactions for RNA: ENST00000452322.2

LINC00339-205, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 1,391 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-205ENST00000452322 CXorf58Q96LI9 332 aa9.22□□□□□ -0.93
LINC00339-205ENST00000452322 NMES1Q9C002 83 aa9.22□□□□□ -0.93
LINC00339-205ENST00000452322 MAGT1Q9H0U3 335 aa9.22□□□□□ -0.93
LINC00339-205ENST00000452322 MGAT4CQ9UBM8 478 aa9.22□□□□□ -0.93
LINC00339-205ENST00000452322 SIX6O95475 246 aa9.21□□□□□ -0.94
LINC00339-205ENST00000452322 MBPP02686 304 aaPredicted RBP9.21□□□□□ -0.94
LINC00339-205ENST00000452322 IAPPP10997 89 aa9.21□□□□□ -0.94
LINC00339-205ENST00000452322 H2BFSP57053 126 aa9.21□□□□□ -0.94
LINC00339-205ENST00000452322 CYCSP99999 105 aaKnown RBP9.21□□□□□ -0.94
LINC00339-205ENST00000452322 EXOSC2Q13868 293 aaKnown RBP9.21□□□□□ -0.94
LINC00339-205ENST00000452322 FAM209BQ5JX69 171 aa9.21□□□□□ -0.94
LINC00339-205ENST00000452322 C11orf87Q6NUJ2 197 aa9.21□□□□□ -0.94
LINC00339-205ENST00000452322 ZNF343Q6P1L6 599 aa9.21□□□□□ -0.94
LINC00339-205ENST00000452322 NOXA1Q86UR1 476 aa9.21□□□□□ -0.94
LINC00339-205ENST00000452322 OR4F17Q8NGA8 305 aa9.21□□□□□ -0.94
LINC00339-205ENST00000452322 VN1R17PQ8TDU5 208 aa9.21□□□□□ -0.94
LINC00339-205ENST00000452322 OR4F4Q96R69 305 aa9.21□□□□□ -0.94
LINC00339-205ENST00000452322 MED28Q9H204 178 aa9.21□□□□□ -0.94
LINC00339-205ENST00000452322 RCL1Q9Y2P8 373 aaKnown RBP9.21□□□□□ -0.94
LINC00339-205ENST00000452322 MFSD2BA6NFX1 497 aa9.2□□□□□ -0.94
LINC00339-205ENST00000452322 K7EIM0 57 aa9.2□□□□□ -0.94
LINC00339-205ENST00000452322 K7EPK0 472 aa9.2□□□□□ -0.94
LINC00339-205ENST00000452322 SSSCA1O60232 199 aa9.2□□□□□ -0.94
LINC00339-205ENST00000452322 IFNA10P01566 189 aa9.2□□□□□ -0.94
LINC00339-205ENST00000452322 RPP30P78346 268 aaKnown RBP9.2□□□□□ -0.94
LINC00339-205ENST00000452322 RNASEH2CQ8TDP1 164 aaKnown RBP9.2□□□□□ -0.94
LINC00339-205ENST00000452322 TMEM170AQ8WVE7 144 aa9.2□□□□□ -0.94
LINC00339-205ENST00000452322 EEF1AKMT3Q96AZ1 226 aa9.2□□□□□ -0.94
LINC00339-205ENST00000452322 MISP3Q96FF7 219 aa9.2□□□□□ -0.94
LINC00339-205ENST00000452322 OR5B12Q96R08 314 aa9.2□□□□□ -0.94
LINC00339-205ENST00000452322 RAB40CQ96S21 281 aa9.2□□□□□ -0.94
LINC00339-205ENST00000452322 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.19□□□□□ -0.94
LINC00339-205ENST00000452322 TRBV7-1A0A0A6YYK4 115 aa9.19□□□□□ -0.94
LINC00339-205ENST00000452322 I3L2K1 104 aa9.19□□□□□ -0.94
LINC00339-205ENST00000452322 MT-CO2P00403 227 aa9.19□□□□□ -0.94
LINC00339-205ENST00000452322 CXCL3P19876 107 aa9.19□□□□□ -0.94
LINC00339-205ENST00000452322 TAS2R30P59541 319 aa9.19□□□□□ -0.94
LINC00339-205ENST00000452322 RRAS2P62070 204 aaPredicted RBP9.19□□□□□ -0.94
LINC00339-205ENST00000452322 RAB32Q13637 225 aa9.19□□□□□ -0.94
LINC00339-205ENST00000452322 FCN2Q15485 313 aa9.19□□□□□ -0.94
LINC00339-205ENST00000452322 OR11H7Q8NGC8 314 aa9.19□□□□□ -0.94
LINC00339-205ENST00000452322 SCARB1Q8WTV0 552 aa9.19□□□□□ -0.94
LINC00339-205ENST00000452322 PINX1Q96BK5 328 aaKnown RBP9.19□□□□□ -0.94
LINC00339-205ENST00000452322 SMIM8Q96KF7 97 aa9.19□□□□□ -0.94
LINC00339-205ENST00000452322 ATP6V0BQ99437 205 aa9.19□□□□□ -0.94
LINC00339-205ENST00000452322 LSM5Q9Y4Y9 91 aaKnown RBP9.19□□□□□ -0.94
LINC00339-205ENST00000452322 C15orf62A8K5M9 175 aa9.18□□□□□ -0.94
LINC00339-205ENST00000452322 TSC22D2O75157 780 aa9.18□□□□□ -0.94
LINC00339-205ENST00000452322 TMEM50AO95807 157 aa9.18□□□□□ -0.94
LINC00339-205ENST00000452322 HSPB1P04792 205 aaKnown RBP9.18□□□□□ -0.94
LINC00339-205ENST00000452322 MYCNOSP40205 109 aa9.18□□□□□ -0.94
LINC00339-205ENST00000452322 OPRK1P41145 380 aa9.18□□□□□ -0.94
LINC00339-205ENST00000452322 PAX9P55771 341 aa9.18□□□□□ -0.94
LINC00339-205ENST00000452322 S100A10P60903 97 aa9.18□□□□□ -0.94
LINC00339-205ENST00000452322 RAB11AP62491 216 aa9.18□□□□□ -0.94
LINC00339-205ENST00000452322 FHL3Q13643 280 aa9.18□□□□□ -0.94
LINC00339-205ENST00000452322 DEFB136Q30KP8 78 aa9.18□□□□□ -0.94
LINC00339-205ENST00000452322 SPANXN5Q5MJ07 72 aa9.18□□□□□ -0.94
LINC00339-205ENST00000452322 ETV3LQ6ZN32 361 aa9.18□□□□□ -0.94
LINC00339-205ENST00000452322 OR11H1Q8NG94 326 aa9.18□□□□□ -0.94
LINC00339-205ENST00000452322 OR1N2Q8NGR9 330 aa9.18□□□□□ -0.94
LINC00339-205ENST00000452322 ZNF502Q8TBZ5 544 aa9.18□□□□□ -0.94
LINC00339-205ENST00000452322 RAX2Q96IS3 184 aa9.18□□□□□ -0.94
LINC00339-205ENST00000452322 CCDC140Q96MF4 163 aa9.18□□□□□ -0.94
LINC00339-205ENST00000452322 RANGRFQ9HD47 186 aaPredicted RBP9.18□□□□□ -0.94
LINC00339-205ENST00000452322 C21orf62Q9NYP8 219 aa9.18□□□□□ -0.94
LINC00339-205ENST00000452322 PSENENQ9NZ42 101 aa9.18□□□□□ -0.94
LINC00339-205ENST00000452322 PEF1Q9UBV8 284 aaKnown RBP9.18□□□□□ -0.94
LINC00339-205ENST00000452322 STRAPQ9Y3F4 350 aaKnown RBP9.18□□□□□ -0.94
LINC00339-205ENST00000452322 CMYA5Q8N3K9 4069 aa9.18□□□□□ -0.94
LINC00339-205ENST00000452322 VWFP04275 2813 aa9.18□□□□□ -0.94
LINC00339-205ENST00000452322 IGHV4OR15-8A0A075B7B6 117 aa9.17□□□□□ -0.94
LINC00339-205ENST00000452322 A0A087WW49 117 aa9.17□□□□□ -0.94
LINC00339-205ENST00000452322 IGHV3-21A0A0B4J1V1 117 aa9.17□□□□□ -0.94
LINC00339-205ENST00000452322 RPS10-NUDT3A0A1W2PQS6 291 aa9.17□□□□□ -0.94
LINC00339-205ENST00000452322 LINC01619G3V211 115 aa9.17□□□□□ -0.94
LINC00339-205ENST00000452322 H3BP45 60 aa9.17□□□□□ -0.94
LINC00339-205ENST00000452322 L7N2F9 121 aa9.17□□□□□ -0.94
LINC00339-205ENST00000452322 CCL24O00175 119 aa9.17□□□□□ -0.94
LINC00339-205ENST00000452322 TSPAN15O95858 294 aa9.17□□□□□ -0.94
LINC00339-205ENST00000452322 IGHV3-23P01764 117 aa9.17□□□□□ -0.94
LINC00339-205ENST00000452322 PF4P02776 101 aa9.17□□□□□ -0.94
LINC00339-205ENST00000452322 IFNA4P05014 189 aa9.17□□□□□ -0.94
LINC00339-205ENST00000452322 OR8U8P0C7N1 319 aa9.17□□□□□ -0.94
LINC00339-205ENST00000452322 PVALBP20472 110 aaPredicted RBP9.17□□□□□ -0.94
LINC00339-205ENST00000452322 FCGR2BP31994 310 aaPredicted RBP9.17□□□□□ -0.94
LINC00339-205ENST00000452322 VAMP2P63027 116 aa9.17□□□□□ -0.94
LINC00339-205ENST00000452322 ZNF616Q08AN1 781 aa9.17□□□□□ -0.94
LINC00339-205ENST00000452322 PPP1R1CQ8WVI7 109 aa9.17□□□□□ -0.94
LINC00339-205ENST00000452322 ASB13Q8WXK3 278 aa9.17□□□□□ -0.94
LINC00339-205ENST00000452322 DUX3Q96PT4 197 aa9.17□□□□□ -0.94
LINC00339-205ENST00000452322 OR4C12Q96R67 309 aa9.17□□□□□ -0.94
LINC00339-205ENST00000452322 C11orf1Q9H5F2 150 aa9.17□□□□□ -0.94
LINC00339-205ENST00000452322 FNDC4Q9H6D8 234 aaPredicted RBP9.17□□□□□ -0.94
LINC00339-205ENST00000452322 GAR1Q9NY12 217 aaKnown RBP9.17□□□□□ -0.94
LINC00339-205ENST00000452322 S4R3C0 116 aa9.17□□□□□ -0.94
LINC00339-205ENST00000452322 ANKRD34BA5PLL1 514 aa9.16□□□□□ -0.94
LINC00339-205ENST00000452322 DEDDO75618 318 aa9.16□□□□□ -0.94
LINC00339-205ENST00000452322 TRBV12-3P01733 135 aa9.16□□□□□ -0.94
LINC00339-205ENST00000452322 RLN2P04090 185 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms