RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 NSG2Q9Y328 171 aa16.71■□□□□ 0.27
C9orf3-208ENST00000451893 SORL1Q92673 2214 aa16.71■□□□□ 0.27
C9orf3-208ENST00000451893 MARCH11A6NNE9 402 aa16.7■□□□□ 0.26
C9orf3-208ENST00000451893 H3BUA1 57 aa16.7■□□□□ 0.26
C9orf3-208ENST00000451893 S100A10P60903 97 aa16.7■□□□□ 0.26
C9orf3-208ENST00000451893 OR2B11Q5JQS5 317 aa16.7■□□□□ 0.26
C9orf3-208ENST00000451893 TMEM68Q96MH6 324 aa16.7■□□□□ 0.26
C9orf3-208ENST00000451893 LSM4Q9Y4Z0 139 aaKnown RBP16.7■□□□□ 0.26
C9orf3-208ENST00000451893 U3KQK5 164 aa16.7■□□□□ 0.26
C9orf3-208ENST00000451893 H0YIZ8 118 aa16.69■□□□□ 0.26
C9orf3-208ENST00000451893 K7EPK0 472 aa16.69■□□□□ 0.26
C9orf3-208ENST00000451893 ARPC5O15511 151 aa16.69■□□□□ 0.26
C9orf3-208ENST00000451893 ACTL6BO94805 426 aa16.69■□□□□ 0.26
C9orf3-208ENST00000451893 CRYZL1O95825 349 aa16.69■□□□□ 0.26
C9orf3-208ENST00000451893 G6PCP35575 357 aa16.69■□□□□ 0.26
C9orf3-208ENST00000451893 TNXAQ16473 311 aa16.69■□□□□ 0.26
C9orf3-208ENST00000451893 CACNG5Q9UF02 275 aa16.69■□□□□ 0.26
C9orf3-208ENST00000451893 A0A0G2JRQ6 117 aa16.68■□□□□ 0.26
C9orf3-208ENST00000451893 ANKRD34BA5PLL1 514 aa16.68■□□□□ 0.26
C9orf3-208ENST00000451893 MED6O75586 246 aa16.68■□□□□ 0.26
C9orf3-208ENST00000451893 ZP3P21754 424 aa16.68■□□□□ 0.26
C9orf3-208ENST00000451893 TMEM177Q53S58 311 aa16.68■□□□□ 0.26
C9orf3-208ENST00000451893 DMBX1Q8NFW5 382 aa16.68■□□□□ 0.26
C9orf3-208ENST00000451893 RHOVQ96L33 236 aa16.68■□□□□ 0.26
C9orf3-208ENST00000451893 LSM5Q9Y4Y9 91 aaKnown RBP16.68■□□□□ 0.26
C9orf3-208ENST00000451893 WRBO00258 174 aa16.67■□□□□ 0.26
C9orf3-208ENST00000451893 SCGB1D2O95969 90 aa16.67■□□□□ 0.26
C9orf3-208ENST00000451893 S100A11P31949 105 aa16.67■□□□□ 0.26
C9orf3-208ENST00000451893 P2RY1P47900 373 aa16.67■□□□□ 0.26
C9orf3-208ENST00000451893 PJVKQ0ZLH3 352 aa16.67■□□□□ 0.26
C9orf3-208ENST00000451893 AARDQ4LEZ3 155 aa16.67■□□□□ 0.26
C9orf3-208ENST00000451893 ACSM6Q6P461 480 aa16.67■□□□□ 0.26
C9orf3-208ENST00000451893 Q6ZRM9 215 aa16.67■□□□□ 0.26
C9orf3-208ENST00000451893 KCNRGQ8N5I3 272 aa16.67■□□□□ 0.26
C9orf3-208ENST00000451893 AQP10Q96PS8 301 aa16.67■□□□□ 0.26
C9orf3-208ENST00000451893 RAB40CQ96S21 281 aa16.67■□□□□ 0.26
C9orf3-208ENST00000451893 IGLV2-23P01705 113 aa16.66■□□□□ 0.26
C9orf3-208ENST00000451893 APELAP0DMC3 54 aa16.66■□□□□ 0.26
C9orf3-208ENST00000451893 GP9P14770 177 aa16.66■□□□□ 0.26
C9orf3-208ENST00000451893 CXCL2P19875 107 aa16.66■□□□□ 0.26
C9orf3-208ENST00000451893 TMUB2Q71RG4 321 aa16.66■□□□□ 0.26
C9orf3-208ENST00000451893 OR5AC2Q9NZP5 309 aa16.66■□□□□ 0.26
C9orf3-208ENST00000451893 TAS2R30P59541 319 aa16.65■□□□□ 0.26
C9orf3-208ENST00000451893 TEX45Q8NA69 505 aa16.65■□□□□ 0.26
C9orf3-208ENST00000451893 OR52E5Q8NH55 327 aa16.65■□□□□ 0.26
C9orf3-208ENST00000451893 VSTM2AQ8TAG5 236 aa16.65■□□□□ 0.26
C9orf3-208ENST00000451893 IL6RP08887 468 aaPredicted RBP16.64■□□□□ 0.25
C9orf3-208ENST00000451893 FGF2P09038 288 aa16.64■□□□□ 0.25
C9orf3-208ENST00000451893 UBE2KP61086 200 aa16.64■□□□□ 0.25
C9orf3-208ENST00000451893 VAMP2P63027 116 aa16.64■□□□□ 0.25
C9orf3-208ENST00000451893 OPCMLQ14982 345 aa16.64■□□□□ 0.25
C9orf3-208ENST00000451893 OR4A16Q8NH70 328 aa16.64■□□□□ 0.25
C9orf3-208ENST00000451893 OR4A5Q8NH83 315 aa16.64■□□□□ 0.25
C9orf3-208ENST00000451893 ARL6Q9H0F7 186 aa16.64■□□□□ 0.25
C9orf3-208ENST00000451893 FKBP11Q9NYL4 201 aa16.64■□□□□ 0.25
C9orf3-208ENST00000451893 BET1LQ9NYM9 111 aa16.64■□□□□ 0.25
C9orf3-208ENST00000451893 HSPB7Q9UBY9 170 aa16.64■□□□□ 0.25
C9orf3-208ENST00000451893 RNF222A6NCQ9 220 aa16.63■□□□□ 0.25
C9orf3-208ENST00000451893 MSGN1A6NI15 193 aa16.63■□□□□ 0.25
C9orf3-208ENST00000451893 SYNGR2O43760 224 aa16.63■□□□□ 0.25
C9orf3-208ENST00000451893 SLC25A31Q9H0C2 315 aa16.63■□□□□ 0.25
C9orf3-208ENST00000451893 C11orf1Q9H5F2 150 aa16.63■□□□□ 0.25
C9orf3-208ENST00000451893 TMEM140Q9NV12 185 aa16.63■□□□□ 0.25
C9orf3-208ENST00000451893 RCL1Q9Y2P8 373 aaKnown RBP16.63■□□□□ 0.25
C9orf3-208ENST00000451893 BOLA1Q9Y3E2 137 aa16.63■□□□□ 0.25
C9orf3-208ENST00000451893 TAAR5O14804 337 aa16.62■□□□□ 0.25
C9orf3-208ENST00000451893 CRYGBP07316 175 aa16.62■□□□□ 0.25
C9orf3-208ENST00000451893 RPL12P30050 165 aaKnown RBP16.62■□□□□ 0.25
C9orf3-208ENST00000451893 POLR2GP62487 172 aaKnown RBP eCLIP16.62■□□□□ 0.25
C9orf3-208ENST00000451893 DEFA5Q01523 94 aa16.62■□□□□ 0.25
C9orf3-208ENST00000451893 TNFRSF9Q07011 255 aa16.62■□□□□ 0.25
C9orf3-208ENST00000451893 SRSF12Q8WXF0 261 aaKnown RBP16.62■□□□□ 0.25
C9orf3-208ENST00000451893 USMG5Q96IX5 58 aa16.62■□□□□ 0.25
C9orf3-208ENST00000451893 SMIM8Q96KF7 97 aa16.62■□□□□ 0.25
C9orf3-208ENST00000451893 CIB3Q96Q77 187 aaPredicted RBP16.62■□□□□ 0.25
C9orf3-208ENST00000451893 PRNDQ9UKY0 176 aa16.62■□□□□ 0.25
C9orf3-208ENST00000451893 KANTRA0A1W2PQU2 76 aa16.61■□□□□ 0.25
C9orf3-208ENST00000451893 SRRM4A7MD48 611 aaKnown RBP16.61■□□□□ 0.25
C9orf3-208ENST00000451893 RBMXL2O75526 392 aaKnown RBP16.61■□□□□ 0.25
C9orf3-208ENST00000451893 OR9G9P0C7N8 305 aa16.61■□□□□ 0.25
C9orf3-208ENST00000451893 SPCS3P61009 180 aa16.61■□□□□ 0.25
C9orf3-208ENST00000451893 PRSS8Q16651 343 aa16.61■□□□□ 0.25
C9orf3-208ENST00000451893 RPEL1Q2QD12 228 aa16.61■□□□□ 0.25
C9orf3-208ENST00000451893 OR4A47Q6IF82 309 aa16.61■□□□□ 0.25
C9orf3-208ENST00000451893 MMD2Q8IY49 270 aa16.61■□□□□ 0.25
C9orf3-208ENST00000451893 OR2C3Q8N628 320 aa16.61■□□□□ 0.25
C9orf3-208ENST00000451893 PEF1Q9UBV8 284 aaKnown RBP16.61■□□□□ 0.25
C9orf3-208ENST00000451893 UPK2O00526 184 aa16.6■□□□□ 0.25
C9orf3-208ENST00000451893 SAA1P0DJI8 122 aaPredicted RBP16.6■□□□□ 0.25
C9orf3-208ENST00000451893 IZUMO4Q1ZYL8 232 aa16.6■□□□□ 0.25
C9orf3-208ENST00000451893 SLC51BQ86UW2 128 aa16.6■□□□□ 0.25
C9orf3-208ENST00000451893 HAPLN4Q86UW8 402 aa16.6■□□□□ 0.25
C9orf3-208ENST00000451893 PUSL1Q8N0Z8 303 aaKnown RBP16.6■□□□□ 0.25
C9orf3-208ENST00000451893 ZMAT4Q9H898 229 aa16.6■□□□□ 0.25
C9orf3-208ENST00000451893 ZC4H2Q9NQZ6 224 aa16.6■□□□□ 0.25
C9orf3-208ENST00000451893 LYRM2Q9NU23 88 aaPredicted RBP16.6■□□□□ 0.25
C9orf3-208ENST00000451893 ZNF257Q9Y2Q1 563 aa16.6■□□□□ 0.25
C9orf3-208ENST00000451893 COL7A1Q02388 2944 aa16.59■□□□□ 0.25
C9orf3-208ENST00000451893 BCL2L11O43521 198 aa16.59■□□□□ 0.25
C9orf3-208ENST00000451893 SSSCA1O60232 199 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms