RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 TRAV38-1A0A0B4J264 116 aa9.89□□□□□ -0.83
COL27A1-202ENST00000451716 VDAC2P45880 294 aaPredicted RBP9.89□□□□□ -0.83
COL27A1-202ENST00000451716 OR4A47Q6IF82 309 aa9.89□□□□□ -0.83
COL27A1-202ENST00000451716 Q8N7P7 452 aa9.89□□□□□ -0.83
COL27A1-202ENST00000451716 TBX15Q96SF7 602 aa9.89□□□□□ -0.83
COL27A1-202ENST00000451716 SAP30LQ9HAJ7 183 aa9.89□□□□□ -0.83
COL27A1-202ENST00000451716 ELOVL5Q9NYP7 299 aa9.89□□□□□ -0.83
COL27A1-202ENST00000451716 IDI2-AS1Q9NZ38 188 aa9.89□□□□□ -0.83
COL27A1-202ENST00000451716 TCF19Q9Y242 345 aa9.89□□□□□ -0.83
COL27A1-202ENST00000451716 ASH1LQ9NR48 2969 aaKnown RBP9.88□□□□□ -0.83
COL27A1-202ENST00000451716 RBFOX2O43251 390 aaKnown RBP eCLIP9.88□□□□□ -0.832e-10■□□□□ 10.1
COL27A1-202ENST00000451716 GFRA3O60609 400 aa9.88□□□□□ -0.83
COL27A1-202ENST00000451716 OR10J1P30954 320 aa9.88□□□□□ -0.83
COL27A1-202ENST00000451716 RAB9AP51151 201 aa9.88□□□□□ -0.83
COL27A1-202ENST00000451716 ZNF439Q8NDP4 499 aa9.88□□□□□ -0.83
COL27A1-202ENST00000451716 ATP6V0BQ99437 205 aa9.88□□□□□ -0.83
COL27A1-202ENST00000451716 PATZ1Q9HBE1 687 aaKnown RBP9.88□□□□□ -0.83
COL27A1-202ENST00000451716 SLC25A10Q9UBX3 287 aaPredicted RBP9.88□□□□□ -0.83
COL27A1-202ENST00000451716 COL6A6A6NMZ7 2263 aa9.88□□□□□ -0.83
COL27A1-202ENST00000451716 TRAV30A0A087WSZ9 112 aa9.88□□□□□ -0.83
COL27A1-202ENST00000451716 PSG1P11464 419 aa9.88□□□□□ -0.83
COL27A1-202ENST00000451716 TNFRSF1AP19438 455 aa9.88□□□□□ -0.83
COL27A1-202ENST00000451716 VWC2Q2TAL6 325 aa9.88□□□□□ -0.83
COL27A1-202ENST00000451716 CTXND1A0A1B0GTU2 59 aa9.87□□□□□ -0.83
COL27A1-202ENST00000451716 CORTO00230 105 aa9.87□□□□□ -0.83
COL27A1-202ENST00000451716 REG1BP48304 166 aa9.87□□□□□ -0.83
COL27A1-202ENST00000451716 RPL31P62899 125 aaKnown RBP9.87□□□□□ -0.83
COL27A1-202ENST00000451716 VAMP3Q15836 100 aa9.87□□□□□ -0.83
COL27A1-202ENST00000451716 TEX36Q5VZQ5 186 aa9.87□□□□□ -0.83
COL27A1-202ENST00000451716 LYPD2Q6UXB3 125 aa9.87□□□□□ -0.83
COL27A1-202ENST00000451716 TMEM18Q96B42 140 aa9.87□□□□□ -0.83
COL27A1-202ENST00000451716 C20orf144Q9BQM9 153 aa9.87□□□□□ -0.83
COL27A1-202ENST00000451716 MS4A5Q9H3V2 200 aa9.87□□□□□ -0.83
COL27A1-202ENST00000451716 PGPEP1Q9NXJ5 209 aa9.87□□□□□ -0.83
COL27A1-202ENST00000451716 SRRM4A7MD48 611 aaKnown RBP9.87□□□□□ -0.83
COL27A1-202ENST00000451716 K7ENP7 123 aa9.87□□□□□ -0.83
COL27A1-202ENST00000451716 BRI3O95415 125 aa9.87□□□□□ -0.83
COL27A1-202ENST00000451716 MDKP21741 143 aaPredicted RBP9.87□□□□□ -0.83
COL27A1-202ENST00000451716 MEF2BQ02080 365 aaPredicted RBP9.87□□□□□ -0.83
COL27A1-202ENST00000451716 C5orf64Q2M2E5 130 aa9.87□□□□□ -0.83
COL27A1-202ENST00000451716 H1FXQ92522 213 aaKnown RBP9.87□□□□□ -0.83
COL27A1-202ENST00000451716 JKAMPQ9P055 326 aa9.87□□□□□ -0.83
COL27A1-202ENST00000451716 RPUSD1Q9UJJ7 312 aaKnown RBP9.87□□□□□ -0.83
COL27A1-202ENST00000451716 WDR83OSQ9Y284 106 aa9.87□□□□□ -0.83
COL27A1-202ENST00000451716 SSUH2Q9Y2M2 353 aa9.87□□□□□ -0.83
COL27A1-202ENST00000451716 ZNF835Q9Y2P0 537 aa9.87□□□□□ -0.83
COL27A1-202ENST00000451716 ANKHD1Q8IWZ3 2542 aaKnown RBP9.87□□□□□ -0.83
COL27A1-202ENST00000451716 C15orf61A6NNL5 157 aa9.86□□□□□ -0.83
COL27A1-202ENST00000451716 PAGE4O60829 102 aa9.86□□□□□ -0.83
COL27A1-202ENST00000451716 IFNA1P01562 189 aa9.86□□□□□ -0.83
COL27A1-202ENST00000451716 STAG3L2P0CL84 134 aa9.86□□□□□ -0.83
COL27A1-202ENST00000451716 CT45A6P0DMU7 189 aa9.86□□□□□ -0.83
COL27A1-202ENST00000451716 CT45A5P0DMU8 189 aa9.86□□□□□ -0.83
COL27A1-202ENST00000451716 CT45A7P0DMV0 189 aa9.86□□□□□ -0.83
COL27A1-202ENST00000451716 PDLIM4P50479 330 aa9.86□□□□□ -0.83
COL27A1-202ENST00000451716 HERV-K104P63124 156 aa9.86□□□□□ -0.83
COL27A1-202ENST00000451716 TREML4Q6UXN2 200 aa9.86□□□□□ -0.83
COL27A1-202ENST00000451716 SSMEM1Q8WWF3 244 aa9.86□□□□□ -0.83
COL27A1-202ENST00000451716 CITED1Q99966 193 aa9.86□□□□□ -0.83
COL27A1-202ENST00000451716 hADV38S2A0JD32 116 aa9.86□□□□□ -0.83
COL27A1-202ENST00000451716 THBS3P49746 956 aa9.86□□□□□ -0.83
COL27A1-202ENST00000451716 MIC13Q5XKP0 118 aa9.86□□□□□ -0.83
COL27A1-202ENST00000451716 WDR25Q64LD2 544 aaPredicted RBP9.86□□□□□ -0.83
COL27A1-202ENST00000451716 OR4F5Q8NH21 305 aa9.86□□□□□ -0.83
COL27A1-202ENST00000451716 OR4F4Q96R69 305 aa9.86□□□□□ -0.83
COL27A1-202ENST00000451716 SMIM7Q9BQ49 75 aa9.86□□□□□ -0.83
COL27A1-202ENST00000451716 PAM16Q9Y3D7 125 aa9.86□□□□□ -0.83
COL27A1-202ENST00000451716 PLXNB1O43157 2135 aa9.86□□□□□ -0.83
COL27A1-202ENST00000451716 TRGV8A0A0C4DH27 118 aa9.85□□□□□ -0.83
COL27A1-202ENST00000451716 A0A0U1RQK1 487 aa9.85□□□□□ -0.83
COL27A1-202ENST00000451716 FAM90A9PA6NNJ1 464 aa9.85□□□□□ -0.83
COL27A1-202ENST00000451716 C17orf112F2Z3M2 114 aa9.85□□□□□ -0.83
COL27A1-202ENST00000451716 KIR2DS2P43631 304 aa9.85□□□□□ -0.83
COL27A1-202ENST00000451716 PSMB3P49720 205 aa9.85□□□□□ -0.83
COL27A1-202ENST00000451716 SLC25A48Q6ZT89 311 aaKnown RBP9.85□□□□□ -0.83
COL27A1-202ENST00000451716 MGST2Q99735 147 aa9.85□□□□□ -0.83
COL27A1-202ENST00000451716 SDF2L1Q9HCN8 221 aa9.85□□□□□ -0.83
COL27A1-202ENST00000451716 PPIAL4EA0A075B759 164 aa9.85□□□□□ -0.83
COL27A1-202ENST00000451716 A0A087WWC5 75 aa9.85□□□□□ -0.83
COL27A1-202ENST00000451716 PRSS46E5RG02 174 aa9.85□□□□□ -0.83
COL27A1-202ENST00000451716 PPIAL4DF5H284 164 aa9.85□□□□□ -0.83
COL27A1-202ENST00000451716 TMEM178BH3BS89 294 aa9.85□□□□□ -0.83
COL27A1-202ENST00000451716 SAP30O75446 220 aa9.85□□□□□ -0.83
COL27A1-202ENST00000451716 PPIAL4FP0DN26 164 aa9.85□□□□□ -0.83
COL27A1-202ENST00000451716 DIAPH2-AS1Q14236 149 aa9.85□□□□□ -0.83
COL27A1-202ENST00000451716 ADIRFQ15847 76 aa9.85□□□□□ -0.83
COL27A1-202ENST00000451716 TMEM200BQ69YZ2 307 aa9.85□□□□□ -0.83
COL27A1-202ENST00000451716 OR52E5Q8NH55 327 aa9.85□□□□□ -0.83
COL27A1-202ENST00000451716 COL25A1Q9BXS0 654 aaPredicted RBP9.85□□□□□ -0.83
COL27A1-202ENST00000451716 RAB9BQ9NP90 201 aa9.85□□□□□ -0.83
COL27A1-202ENST00000451716 E7EQL1 145 aa9.85□□□□□ -0.83
COL27A1-202ENST00000451716 CA2P00918 260 aa9.85□□□□□ -0.83
COL27A1-202ENST00000451716 PRB3Q04118 309 aaPredicted RBP9.85□□□□□ -0.83
COL27A1-202ENST00000451716 RNASE6Q93091 150 aaKnown RBP9.85□□□□□ -0.83
COL27A1-202ENST00000451716 C1orf159Q96HA4 380 aa9.85□□□□□ -0.83
COL27A1-202ENST00000451716 P2RX4Q99571 388 aa9.85□□□□□ -0.83
COL27A1-202ENST00000451716 DYNLRB1Q9NP97 96 aa9.85□□□□□ -0.83
COL27A1-202ENST00000451716 TMEM14BQ9NUH8 114 aa9.85□□□□□ -0.83
COL27A1-202ENST00000451716 LINC00312Q9Y6C7 94 aa9.85□□□□□ -0.83
COL27A1-202ENST00000451716 SHISA9B4DS77 424 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms