RNA–Protein interactions for RNA: ENST00000451070.1

LINC01238-204, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 4

Gene LINC01238, Length 599 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-204ENST00000451070 TMEM61Q8N0U2 210 aa7.42□□□□□ -1.22
LINC01238-204ENST00000451070 C9orf62Q8N4C0 152 aa7.42□□□□□ -1.22
LINC01238-204ENST00000451070 GVQW1Q8N7I0 195 aa7.42□□□□□ -1.22
LINC01238-204ENST00000451070 SLC25A38Q96DW6 304 aa7.42□□□□□ -1.22
LINC01238-204ENST00000451070 SLIRPQ9GZT3 109 aaKnown RBP7.42□□□□□ -1.22
LINC01238-204ENST00000451070 CCL28Q9NRJ3 127 aa7.42□□□□□ -1.22
LINC01238-204ENST00000451070 SCP2D1Q9UJQ7 156 aa7.42□□□□□ -1.22
LINC01238-204ENST00000451070 ALMS1Q8TCU4 4167 aa7.42□□□□□ -1.22
LINC01238-204ENST00000451070 A0A0B4J293 547 aa7.41□□□□□ -1.22
LINC01238-204ENST00000451070 A8MWP6 167 aa7.41□□□□□ -1.22
LINC01238-204ENST00000451070 UBE2CO00762 179 aa7.41□□□□□ -1.22
LINC01238-204ENST00000451070 TNFSF12O43508 249 aa7.41□□□□□ -1.22
LINC01238-204ENST00000451070 HRASP01112 189 aa7.41□□□□□ -1.22
LINC01238-204ENST00000451070 REG1AP05451 166 aa7.41□□□□□ -1.22
LINC01238-204ENST00000451070 HLA-GP17693 338 aa7.41□□□□□ -1.22
LINC01238-204ENST00000451070 FCGR2CP31995 323 aa7.41□□□□□ -1.22
LINC01238-204ENST00000451070 SDC2P34741 201 aa7.41□□□□□ -1.22
LINC01238-204ENST00000451070 RPS19P39019 145 aaKnown RBP7.41□□□□□ -1.22
LINC01238-204ENST00000451070 PRR20EP86478 221 aa7.41□□□□□ -1.22
LINC01238-204ENST00000451070 PRR20CP86479 221 aa7.41□□□□□ -1.22
LINC01238-204ENST00000451070 PRR20DP86480 221 aa7.41□□□□□ -1.22
LINC01238-204ENST00000451070 PRR20BP86481 221 aa7.41□□□□□ -1.22
LINC01238-204ENST00000451070 PRR20AP86496 221 aa7.41□□□□□ -1.22
LINC01238-204ENST00000451070 NEDD8Q15843 81 aa7.41□□□□□ -1.22
LINC01238-204ENST00000451070 TIMM50Q3ZCQ8 353 aa7.41□□□□□ -1.22
LINC01238-204ENST00000451070 OR4A47Q6IF82 309 aa7.41□□□□□ -1.22
LINC01238-204ENST00000451070 WDR73Q6P4I2 378 aa7.41□□□□□ -1.22
LINC01238-204ENST00000451070 BEST4Q8NFU0 473 aa7.41□□□□□ -1.22
LINC01238-204ENST00000451070 MCFD2Q8NI22 146 aa7.41□□□□□ -1.22
LINC01238-204ENST00000451070 SECTM1Q8WVN6 248 aa7.41□□□□□ -1.22
LINC01238-204ENST00000451070 RNF167Q9H6Y7 350 aa7.41□□□□□ -1.22
LINC01238-204ENST00000451070 BET1LQ9NYM9 111 aa7.41□□□□□ -1.22
LINC01238-204ENST00000451070 HSPB11Q9Y547 144 aa7.41□□□□□ -1.22
LINC01238-204ENST00000451070 ALG5Q9Y673 324 aa7.41□□□□□ -1.22
LINC01238-204ENST00000451070 TRAV18A0A075B6X5 111 aa7.4□□□□□ -1.22
LINC01238-204ENST00000451070 TRAV3A0A0B4J244 114 aa7.4□□□□□ -1.22
LINC01238-204ENST00000451070 LOC100506127A0A0U1RQW1 187 aa7.4□□□□□ -1.22
LINC01238-204ENST00000451070 IGLC7A0M8Q6 106 aa7.4□□□□□ -1.22
LINC01238-204ENST00000451070 RBFOX2O43251 390 aaKnown RBP eCLIP7.4□□□□□ -1.22
LINC01238-204ENST00000451070 PPYP01298 95 aa7.4□□□□□ -1.22
LINC01238-204ENST00000451070 RLN2P04090 185 aa7.4□□□□□ -1.22
LINC01238-204ENST00000451070 HIST1H1BP16401 226 aaKnown RBP7.4□□□□□ -1.22
LINC01238-204ENST00000451070 OR2B8PP59922 312 aa7.4□□□□□ -1.22
LINC01238-204ENST00000451070 MXD1Q05195 221 aa7.4□□□□□ -1.22
LINC01238-204ENST00000451070 MSMO1Q15800 293 aa7.4□□□□□ -1.22
LINC01238-204ENST00000451070 POU2AF1Q16633 256 aa7.4□□□□□ -1.22
LINC01238-204ENST00000451070 FAM106AQ4KMX7 169 aa7.4□□□□□ -1.22
LINC01238-204ENST00000451070 TM4SF20Q53R12 229 aa7.4□□□□□ -1.22
LINC01238-204ENST00000451070 ZNF57Q68EA5 555 aaPredicted RBP7.4□□□□□ -1.22
LINC01238-204ENST00000451070 UNQ9165/PRO28630Q6UXU0 137 aa7.4□□□□□ -1.22
LINC01238-204ENST00000451070 HOGA1Q86XE5 327 aa7.4□□□□□ -1.22
LINC01238-204ENST00000451070 SPAG16Q8N0X2 631 aa7.4□□□□□ -1.22
LINC01238-204ENST00000451070 UXS1Q8NBZ7 420 aa7.4□□□□□ -1.22
LINC01238-204ENST00000451070 IL17DQ8TAD2 202 aa7.4□□□□□ -1.22
LINC01238-204ENST00000451070 GLYATL2Q8WU03 294 aa7.4□□□□□ -1.22
LINC01238-204ENST00000451070 EEF1AKMT3Q96AZ1 226 aa7.4□□□□□ -1.22
LINC01238-204ENST00000451070 C14orf144Q96I85 54 aa7.4□□□□□ -1.22
LINC01238-204ENST00000451070 LINC00052Q96N35 136 aa7.4□□□□□ -1.22
LINC01238-204ENST00000451070 TXN2Q99757 166 aa7.4□□□□□ -1.22
LINC01238-204ENST00000451070 SSR3Q9UNL2 185 aa7.4□□□□□ -1.22
LINC01238-204ENST00000451070 TRBV7-1A0A0A6YYK4 115 aa7.39□□□□□ -1.23
LINC01238-204ENST00000451070 ZNF320A2RRD8 509 aa7.39□□□□□ -1.23
LINC01238-204ENST00000451070 UPK2O00526 184 aa7.39□□□□□ -1.23
LINC01238-204ENST00000451070 MED6O75586 246 aa7.39□□□□□ -1.23
LINC01238-204ENST00000451070 JTBO76095 146 aa7.39□□□□□ -1.23
LINC01238-204ENST00000451070 SCAF4O95104 1147 aaKnown RBP7.39□□□□□ -1.23
LINC01238-204ENST00000451070 CLEC3BP05452 202 aa7.39□□□□□ -1.23
LINC01238-204ENST00000451070 FGF2P09038 288 aa7.39□□□□□ -1.23
LINC01238-204ENST00000451070 C8orf88P0DMB2 117 aa7.39□□□□□ -1.23
LINC01238-204ENST00000451070 DEFA4P12838 97 aa7.39□□□□□ -1.23
LINC01238-204ENST00000451070 SCAND1P57086 179 aa7.39□□□□□ -1.23
LINC01238-204ENST00000451070 TAS2R31P59538 309 aa7.39□□□□□ -1.23
LINC01238-204ENST00000451070 NUTF2P61970 127 aaKnown RBP7.39□□□□□ -1.23
LINC01238-204ENST00000451070 BTNL8Q6UX41 500 aa7.39□□□□□ -1.23
LINC01238-204ENST00000451070 ZNF818PQ6ZRF7 136 aa7.39□□□□□ -1.23
LINC01238-204ENST00000451070 SLC16A13Q7RTY0 426 aa7.39□□□□□ -1.23
LINC01238-204ENST00000451070 SNX29P2Q8IUI4 249 aa7.39□□□□□ -1.23
LINC01238-204ENST00000451070 ZBTB34Q8NCN2 500 aa7.39□□□□□ -1.23
LINC01238-204ENST00000451070 OR4A5Q8NH83 315 aa7.39□□□□□ -1.23
LINC01238-204ENST00000451070 ZNF502Q8TBZ5 544 aa7.39□□□□□ -1.23
LINC01238-204ENST00000451070 FCGR1BQ92637 280 aa7.39□□□□□ -1.23
LINC01238-204ENST00000451070 RAB24Q969Q5 203 aa7.39□□□□□ -1.23
LINC01238-204ENST00000451070 YIPF6Q96EC8 236 aa7.39□□□□□ -1.23
LINC01238-204ENST00000451070 OVOL2Q9BRP0 275 aa7.39□□□□□ -1.23
LINC01238-204ENST00000451070 ZNF436Q9C0F3 470 aaPredicted RBP7.39□□□□□ -1.23
LINC01238-204ENST00000451070 SLC5A7Q9GZV3 580 aa7.39□□□□□ -1.23
LINC01238-204ENST00000451070 AUNIPQ9H7T9 357 aa7.39□□□□□ -1.23
LINC01238-204ENST00000451070 SEPSECSQ9HD40 501 aaKnown RBP7.39□□□□□ -1.23
LINC01238-204ENST00000451070 HRASLSQ9HDD0 168 aa7.39□□□□□ -1.23
LINC01238-204ENST00000451070 ETV7Q9Y603 341 aa7.39□□□□□ -1.23
LINC01238-204ENST00000451070 A0A0A6YYH2 397 aa7.38□□□□□ -1.23
LINC01238-204ENST00000451070 IGHV3-35A0A0C4DH35 117 aa7.38□□□□□ -1.23
LINC01238-204ENST00000451070 A6NJ64 397 aa7.38□□□□□ -1.23
LINC01238-204ENST00000451070 S1PR2O95136 353 aa7.38□□□□□ -1.23
LINC01238-204ENST00000451070 SCGB1D2O95969 90 aa7.38□□□□□ -1.23
LINC01238-204ENST00000451070 HPRT1P00492 218 aa7.38□□□□□ -1.23
LINC01238-204ENST00000451070 NQO2P16083 231 aa7.38□□□□□ -1.23
LINC01238-204ENST00000451070 G0S2P27469 103 aa7.38□□□□□ -1.23
LINC01238-204ENST00000451070 GPR183P32249 361 aa7.38□□□□□ -1.23
LINC01238-204ENST00000451070 FXYD4P59646 89 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms