RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 E5RGE8 158 aa13.28□□□□□ -0.28
PRPF40A-204ENST00000450303 G3V318 75 aa13.28□□□□□ -0.28
PRPF40A-204ENST00000450303 K7EPK0 472 aa13.28□□□□□ -0.28
PRPF40A-204ENST00000450303 SCGB1D2O95969 90 aa13.28□□□□□ -0.28
PRPF40A-204ENST00000450303 IFNA17P01571 189 aa13.28□□□□□ -0.28
PRPF40A-204ENST00000450303 IGF1P05019 195 aa13.28□□□□□ -0.28
PRPF40A-204ENST00000450303 ELANEP08246 267 aa13.28□□□□□ -0.28
PRPF40A-204ENST00000450303 RPL27AP46776 148 aaKnown RBP13.28□□□□□ -0.28
PRPF40A-204ENST00000450303 OR2B8PP59922 312 aa13.28□□□□□ -0.28
PRPF40A-204ENST00000450303 FOXE3Q13461 319 aa13.28□□□□□ -0.28
PRPF40A-204ENST00000450303 FXYD3Q14802 87 aa13.28□□□□□ -0.28
PRPF40A-204ENST00000450303 IZUMO4Q1ZYL8 232 aa13.28□□□□□ -0.28
PRPF40A-204ENST00000450303 OR1L8Q8NGR8 309 aa13.28□□□□□ -0.28
PRPF40A-204ENST00000450303 OR5B3Q8NH48 314 aa13.28□□□□□ -0.28
PRPF40A-204ENST00000450303 ABHD5Q8WTS1 349 aa13.28□□□□□ -0.28
PRPF40A-204ENST00000450303 P2RX4Q99571 388 aa13.28□□□□□ -0.28
PRPF40A-204ENST00000450303 PARP11Q9NR21 331 aa13.28□□□□□ -0.28
PRPF40A-204ENST00000450303 TMEM14BQ9NUH8 114 aa13.28□□□□□ -0.28
PRPF40A-204ENST00000450303 LSM5Q9Y4Y9 91 aaKnown RBP13.28□□□□□ -0.28
PRPF40A-204ENST00000450303 IGHV7-81A0A0B4J1V7 117 aa13.27□□□□□ -0.29
PRPF40A-204ENST00000450303 FAM90A26D6RGX4 464 aa13.27□□□□□ -0.29
PRPF40A-204ENST00000450303 H0YIZ8 118 aa13.27□□□□□ -0.29
PRPF40A-204ENST00000450303 CCL24O00175 119 aa13.27□□□□□ -0.29
PRPF40A-204ENST00000450303 FCN1O00602 326 aa13.27□□□□□ -0.29
PRPF40A-204ENST00000450303 ATP6V0E1O15342 81 aa13.27□□□□□ -0.29
PRPF40A-204ENST00000450303 MED6O75586 246 aa13.27□□□□□ -0.29
PRPF40A-204ENST00000450303 IGHG4P01861 327 aa13.27□□□□□ -0.29
PRPF40A-204ENST00000450303 NMBP08949 121 aa13.27□□□□□ -0.29
PRPF40A-204ENST00000450303 PVALBP20472 110 aaPredicted RBP13.27□□□□□ -0.29
PRPF40A-204ENST00000450303 HSPE1P61604 102 aaKnown RBP13.27□□□□□ -0.29
PRPF40A-204ENST00000450303 CX3CL1P78423 397 aa13.27□□□□□ -0.29
PRPF40A-204ENST00000450303 PJVKQ0ZLH3 352 aa13.27□□□□□ -0.29
PRPF40A-204ENST00000450303 Q6ZRM9 215 aa13.27□□□□□ -0.29
PRPF40A-204ENST00000450303 OR52E5Q8NH55 327 aa13.27□□□□□ -0.29
PRPF40A-204ENST00000450303 QTRT1Q9BXR0 403 aaKnown RBP13.27□□□□□ -0.29
PRPF40A-204ENST00000450303 ENY2Q9NPA8 101 aa13.27□□□□□ -0.29
PRPF40A-204ENST00000450303 OR5AC2Q9NZP5 309 aa13.27□□□□□ -0.29
PRPF40A-204ENST00000450303 WI2-2373I1.2A0A1W2PRP0 233 aa13.26□□□□□ -0.29
PRPF40A-204ENST00000450303 MPTX1A8MV57 137 aa13.26□□□□□ -0.29
PRPF40A-204ENST00000450303 I3L521 148 aa13.26□□□□□ -0.29
PRPF40A-204ENST00000450303 K7EIL1 84 aa13.26□□□□□ -0.29
PRPF40A-204ENST00000450303 ST8SIA3O43173 380 aa13.26□□□□□ -0.29
PRPF40A-204ENST00000450303 DEDDO75618 318 aa13.26□□□□□ -0.29
PRPF40A-204ENST00000450303 CDX1P47902 265 aaPredicted RBP13.26□□□□□ -0.29
PRPF40A-204ENST00000450303 SPCS3P61009 180 aa13.26□□□□□ -0.29
PRPF40A-204ENST00000450303 BAP18Q8IXM2 172 aa13.26□□□□□ -0.29
PRPF40A-204ENST00000450303 ARPC1AQ92747 370 aa13.26□□□□□ -0.29
PRPF40A-204ENST00000450303 KLK15Q9H2R5 256 aa13.26□□□□□ -0.29
PRPF40A-204ENST00000450303 TEX50A0A1B0GTY4 177 aa13.25□□□□□ -0.29
PRPF40A-204ENST00000450303 A0A1W2PN81 502 aa13.25□□□□□ -0.29
PRPF40A-204ENST00000450303 WRBO00258 174 aa13.25□□□□□ -0.29
PRPF40A-204ENST00000450303 PITX3O75364 302 aa13.25□□□□□ -0.29
PRPF40A-204ENST00000450303 PSMB8P28062 276 aa13.25□□□□□ -0.29
PRPF40A-204ENST00000450303 RPL12P30050 165 aaKnown RBP13.25□□□□□ -0.29
PRPF40A-204ENST00000450303 PPIFP30405 207 aaKnown RBP13.25□□□□□ -0.29
PRPF40A-204ENST00000450303 CHRNA7P36544 502 aa13.25□□□□□ -0.29
PRPF40A-204ENST00000450303 NKX2-1P43699 371 aaPredicted RBP13.25□□□□□ -0.29
PRPF40A-204ENST00000450303 TMEM267Q0VDI3 215 aaPredicted RBP13.25□□□□□ -0.29
PRPF40A-204ENST00000450303 MRGPRG-AS1Q2M3A8 158 aa13.25□□□□□ -0.29
PRPF40A-204ENST00000450303 DEFB121Q5J5C9 76 aa13.25□□□□□ -0.29
PRPF40A-204ENST00000450303 HSD17B13Q7Z5P4 300 aaPredicted RBP13.25□□□□□ -0.29
PRPF40A-204ENST00000450303 RNF152Q8N8N0 203 aa13.25□□□□□ -0.29
PRPF40A-204ENST00000450303 PCNPQ8WW12 178 aaKnown RBP13.25□□□□□ -0.29
PRPF40A-204ENST00000450303 SRSF12Q8WXF0 261 aaKnown RBP13.25□□□□□ -0.29
PRPF40A-204ENST00000450303 TMEM68Q96MH6 324 aa13.25□□□□□ -0.29
PRPF40A-204ENST00000450303 SRSF8Q9BRL6 282 aaKnown RBP13.25□□□□□ -0.29
PRPF40A-204ENST00000450303 HINT2Q9BX68 163 aa13.25□□□□□ -0.29
PRPF40A-204ENST00000450303 FBXO7Q9Y3I1 522 aa13.25□□□□□ -0.29
PRPF40A-204ENST00000450303 BORCS7-ASMTA0A0B4J1R7 106 aa13.24□□□□□ -0.29
PRPF40A-204ENST00000450303 TRAV41A0A0B4J266 112 aa13.24□□□□□ -0.29
PRPF40A-204ENST00000450303 CEBPZOSA8MTT3 80 aa13.24□□□□□ -0.29
PRPF40A-204ENST00000450303 LY86O95711 162 aa13.24□□□□□ -0.29
PRPF40A-204ENST00000450303 NDPQ00604 133 aa13.24□□□□□ -0.29
PRPF40A-204ENST00000450303 ECSCRQ19T08 205 aa13.24□□□□□ -0.29
PRPF40A-204ENST00000450303 AARDQ4LEZ3 155 aa13.24□□□□□ -0.29
PRPF40A-204ENST00000450303 CCDC28AQ8IWP9 274 aa13.24□□□□□ -0.29
PRPF40A-204ENST00000450303 OR4D5Q8NGN0 318 aa13.24□□□□□ -0.29
PRPF40A-204ENST00000450303 DPF1Q92782 380 aa13.24□□□□□ -0.29
PRPF40A-204ENST00000450303 OR5B12Q96R08 314 aa13.24□□□□□ -0.29
PRPF40A-204ENST00000450303 PLEKHA3Q9HB20 300 aa13.24□□□□□ -0.29
PRPF40A-204ENST00000450303 MSGN1A6NI15 193 aa13.23□□□□□ -0.29
PRPF40A-204ENST00000450303 JTBO76095 146 aa13.23□□□□□ -0.29
PRPF40A-204ENST00000450303 P2RY1P47900 373 aa13.23□□□□□ -0.29
PRPF40A-204ENST00000450303 HOXA1P49639 335 aaPredicted RBP13.23□□□□□ -0.29
PRPF40A-204ENST00000450303 PRCDQ00LT1 54 aa13.23□□□□□ -0.29
PRPF40A-204ENST00000450303 TNFRSF9Q07011 255 aa13.23□□□□□ -0.29
PRPF40A-204ENST00000450303 EGFEM1PQ0D2K5 195 aa13.23□□□□□ -0.29
PRPF40A-204ENST00000450303 TOR2AQ5JU69 321 aa13.23□□□□□ -0.29
PRPF40A-204ENST00000450303 RNF141Q8WVD5 230 aa13.23□□□□□ -0.29
PRPF40A-204ENST00000450303 MCRIP2Q9BUT9 160 aaKnown RBP13.23□□□□□ -0.29
PRPF40A-204ENST00000450303 HIPK2Q9H2X6 1198 aa13.23□□□□□ -0.29
PRPF40A-204ENST00000450303 GNB4Q9HAV0 340 aa13.23□□□□□ -0.29
PRPF40A-204ENST00000450303 NDUFA4L2Q9NRX3 87 aa13.23□□□□□ -0.29
PRPF40A-204ENST00000450303 HSPB7Q9UBY9 170 aa13.23□□□□□ -0.29
PRPF40A-204ENST00000450303 ZNF580Q9UK33 172 aa13.23□□□□□ -0.29
PRPF40A-204ENST00000450303 NXPH3O95157 252 aa13.22□□□□□ -0.29
PRPF40A-204ENST00000450303 MBPP02686 304 aaPredicted RBP13.22□□□□□ -0.29
PRPF40A-204ENST00000450303 MYOD1P15172 320 aa13.22□□□□□ -0.29
PRPF40A-204ENST00000450303 VAMP2P63027 116 aa13.22□□□□□ -0.29
PRPF40A-204ENST00000450303 ERHP84090 104 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms