RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 HAPLN4Q86UW8 402 aa11.47□□□□□ -0.57
TNF-208ENST00000449264 HSPB11Q9Y547 144 aa11.47□□□□□ -0.57
TNF-208ENST00000449264 DMRT1Q9Y5R6 373 aa11.47□□□□□ -0.57
TNF-208ENST00000449264 OPRK1P41145 380 aa11.46□□□□□ -0.57
TNF-208ENST00000449264 BAXQ07812 192 aa11.46□□□□□ -0.57
TNF-208ENST00000449264 ARL16Q0P5N6 197 aa11.46□□□□□ -0.57
TNF-208ENST00000449264 CLINT1Q14677 625 aa11.46□□□□□ -0.57
TNF-208ENST00000449264 LILRB2Q8N423 598 aa11.46□□□□□ -0.57
TNF-208ENST00000449264 C9orf62Q8N4C0 152 aa11.46□□□□□ -0.57
TNF-208ENST00000449264 OR10P1Q8NGE3 313 aa11.46□□□□□ -0.57
TNF-208ENST00000449264 OR5C1Q8NGR4 320 aa11.46□□□□□ -0.57
TNF-208ENST00000449264 PPP1R14BQ96C90 147 aa11.46□□□□□ -0.57
TNF-208ENST00000449264 MS4A10Q96PG2 267 aa11.46□□□□□ -0.57
TNF-208ENST00000449264 IGHV3-21A0A0B4J1V1 117 aa11.46□□□□□ -0.58
TNF-208ENST00000449264 PMS2P5A8MQ11 134 aa11.46□□□□□ -0.58
TNF-208ENST00000449264 TSPAN9O75954 239 aa11.46□□□□□ -0.58
TNF-208ENST00000449264 ATP5IP56385 69 aaPredicted RBP11.46□□□□□ -0.58
TNF-208ENST00000449264 HBG1P69891 147 aa11.46□□□□□ -0.58
TNF-208ENST00000449264 HBG2P69892 147 aa11.46□□□□□ -0.58
TNF-208ENST00000449264 SLC38A11Q08AI6 406 aa11.46□□□□□ -0.58
TNF-208ENST00000449264 OR2F1Q13607 317 aa11.46□□□□□ -0.58
TNF-208ENST00000449264 ZNF345Q14585 488 aa11.46□□□□□ -0.58
TNF-208ENST00000449264 LGALSLQ3ZCW2 172 aaPredicted RBP11.46□□□□□ -0.58
TNF-208ENST00000449264 ARL6Q9H0F7 186 aa11.46□□□□□ -0.58
TNF-208ENST00000449264 SERTAD4Q9NUC0 356 aa11.46□□□□□ -0.58
TNF-208ENST00000449264 FBXL17Q9UF56 701 aa11.46□□□□□ -0.58
TNF-208ENST00000449264 ZNF580Q9UK33 172 aa11.46□□□□□ -0.58
TNF-208ENST00000449264 IGLV11-55A0A075B6I3 123 aa11.45□□□□□ -0.58
TNF-208ENST00000449264 CYB5BO43169 146 aa11.45□□□□□ -0.58
TNF-208ENST00000449264 OR2J3O76001 311 aa11.45□□□□□ -0.58
TNF-208ENST00000449264 IGHV3-48P01763 117 aa11.45□□□□□ -0.58
TNF-208ENST00000449264 PPIFP30405 207 aaKnown RBP11.45□□□□□ -0.58
TNF-208ENST00000449264 C10orf99Q6UWK7 81 aa11.45□□□□□ -0.58
TNF-208ENST00000449264 OR1S2Q8NGQ3 325 aa11.45□□□□□ -0.58
TNF-208ENST00000449264 OR1L6Q8NGR2 347 aa11.45□□□□□ -0.58
TNF-208ENST00000449264 FANCD2OSQ96PS1 177 aa11.45□□□□□ -0.58
TNF-208ENST00000449264 GON7Q9BXV9 100 aa11.45□□□□□ -0.58
TNF-208ENST00000449264 SMCO3A2RU48 225 aa11.44□□□□□ -0.58
TNF-208ENST00000449264 PSMB11A5LHX3 300 aa11.44□□□□□ -0.58
TNF-208ENST00000449264 CORTO00230 105 aa11.44□□□□□ -0.58
TNF-208ENST00000449264 PF4V1P10720 104 aa11.44□□□□□ -0.58
TNF-208ENST00000449264 SLC35B1P78383 322 aa11.44□□□□□ -0.58
TNF-208ENST00000449264 CFHR3Q02985 330 aa11.44□□□□□ -0.58
TNF-208ENST00000449264 LAMTOR1Q6IAA8 161 aa11.44□□□□□ -0.58
TNF-208ENST00000449264 TMUB2Q71RG4 321 aa11.44□□□□□ -0.58
TNF-208ENST00000449264 KCNRGQ8N5I3 272 aa11.44□□□□□ -0.58
TNF-208ENST00000449264 RNASEH2CQ8TDP1 164 aaKnown RBP11.44□□□□□ -0.58
TNF-208ENST00000449264 A0A0D9SG52 128 aa11.43□□□□□ -0.58
TNF-208ENST00000449264 PRSS46E5RG02 174 aa11.43□□□□□ -0.58
TNF-208ENST00000449264 MT-CO2P00403 227 aa11.43□□□□□ -0.58
TNF-208ENST00000449264 TRGV3P03979 118 aa11.43□□□□□ -0.58
TNF-208ENST00000449264 TPPP2P59282 170 aa11.43□□□□□ -0.58
TNF-208ENST00000449264 RHOGP84095 191 aa11.43□□□□□ -0.58
TNF-208ENST00000449264 MLANAQ16655 118 aa11.43□□□□□ -0.58
TNF-208ENST00000449264 LCNL1Q6ZST4 164 aa11.43□□□□□ -0.58
TNF-208ENST00000449264 SLC16A13Q7RTY0 426 aa11.43□□□□□ -0.58
TNF-208ENST00000449264 CENPVQ7Z7K6 275 aaPredicted RBP11.43□□□□□ -0.58
TNF-208ENST00000449264 FNDC4Q9H6D8 234 aaPredicted RBP11.43□□□□□ -0.58
TNF-208ENST00000449264 BOLA1Q9Y3E2 137 aa11.43□□□□□ -0.58
TNF-208ENST00000449264 S4R3C0 116 aa11.43□□□□□ -0.58
TNF-208ENST00000449264 UBE2L5PA0A1B0GUS4 154 aa11.43□□□□□ -0.58
TNF-208ENST00000449264 KANTRA0A1W2PQU2 76 aa11.43□□□□□ -0.58
TNF-208ENST00000449264 SCAF4O95104 1147 aaKnown RBP11.43□□□□□ -0.58
TNF-208ENST00000449264 HIST1H1BP16401 226 aaKnown RBP11.43□□□□□ -0.58
TNF-208ENST00000449264 S100A11P31949 105 aa11.43□□□□□ -0.58
TNF-208ENST00000449264 CD69Q07108 199 aa11.43□□□□□ -0.58
TNF-208ENST00000449264 EXOSC2Q13868 293 aaKnown RBP11.43□□□□□ -0.58
TNF-208ENST00000449264 PVRIGQ6DKI7 326 aa11.43□□□□□ -0.58
TNF-208ENST00000449264 LINC01006Q8NI28 216 aa11.43□□□□□ -0.58
TNF-208ENST00000449264 THYN1Q9P016 225 aa11.43□□□□□ -0.58
TNF-208ENST00000449264 FBXL7Q9UJT9 491 aa11.43□□□□□ -0.58
TNF-208ENST00000449264 ATRQ13535 2644 aa11.42□□□□□ -0.58
TNF-208ENST00000449264 BCL2L11O43521 198 aa11.42□□□□□ -0.58
TNF-208ENST00000449264 NDUFB8O95169 186 aa11.42□□□□□ -0.58
TNF-208ENST00000449264 NDUFA7O95182 113 aa11.42□□□□□ -0.58
TNF-208ENST00000449264 IGLV1-40P01703 118 aa11.42□□□□□ -0.58
TNF-208ENST00000449264 AKR1C1Q04828 323 aa11.42□□□□□ -0.58
TNF-208ENST00000449264 OR4F5Q8NH21 305 aa11.42□□□□□ -0.58
TNF-208ENST00000449264 ACY3Q96HD9 319 aa11.42□□□□□ -0.58
TNF-208ENST00000449264 SLC35E1Q96K37 410 aa11.42□□□□□ -0.58
TNF-208ENST00000449264 ATP5SQ99766 215 aa11.42□□□□□ -0.58
TNF-208ENST00000449264 ARPC5LQ9BPX5 153 aa11.42□□□□□ -0.58
TNF-208ENST00000449264 C16orf95Q9H693 158 aa11.42□□□□□ -0.58
TNF-208ENST00000449264 WFDC1Q9HC57 220 aa11.42□□□□□ -0.58
TNF-208ENST00000449264 RPS10-NUDT3A0A1W2PQS6 291 aa11.41□□□□□ -0.58
TNF-208ENST00000449264 MFSD2BA6NFX1 497 aa11.41□□□□□ -0.58
TNF-208ENST00000449264 H3BUA1 57 aa11.41□□□□□ -0.58
TNF-208ENST00000449264 I3L2K1 104 aa11.41□□□□□ -0.58
TNF-208ENST00000449264 K7EIM0 57 aa11.41□□□□□ -0.58
TNF-208ENST00000449264 IGHV3-23P01764 117 aa11.41□□□□□ -0.58
TNF-208ENST00000449264 IGHG4P01861 327 aa11.41□□□□□ -0.58
TNF-208ENST00000449264 DLK1P80370 383 aa11.41□□□□□ -0.58
TNF-208ENST00000449264 C15orf32Q32M92 178 aa11.41□□□□□ -0.58
TNF-208ENST00000449264 TEX38Q6PEX7 206 aa11.41□□□□□ -0.58
TNF-208ENST00000449264 KLHDC1Q8N7A1 406 aa11.41□□□□□ -0.58
TNF-208ENST00000449264 NECAP1Q8NC96 275 aa11.41□□□□□ -0.58
TNF-208ENST00000449264 TMEM147Q9BVK8 224 aa11.41□□□□□ -0.58
TNF-208ENST00000449264 KLK15Q9H2R5 256 aa11.41□□□□□ -0.58
TNF-208ENST00000449264 UQCC1Q9NVA1 299 aa11.41□□□□□ -0.58
TNF-208ENST00000449264 TRBV9A0A0B4J1U6 114 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms