RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 LINC00527Q9UJ94 153 aa11.03□□□□□ -0.64
SHMT2-203ENST00000449049 C15orf62A8K5M9 175 aa11.03□□□□□ -0.64
SHMT2-203ENST00000449049 H3BP45 60 aa11.03□□□□□ -0.64
SHMT2-203ENST00000449049 FBXO24O75426 580 aa11.03□□□□□ -0.64
SHMT2-203ENST00000449049 NDUFA7O95182 113 aa11.03□□□□□ -0.64
SHMT2-203ENST00000449049 SNCAP37840 140 aa11.03□□□□□ -0.64
SHMT2-203ENST00000449049 RPP30P78346 268 aaKnown RBP11.03□□□□□ -0.64
SHMT2-203ENST00000449049 CFHR3Q02985 330 aa11.03□□□□□ -0.64
SHMT2-203ENST00000449049 C2orf83Q53S99 150 aa11.03□□□□□ -0.64
SHMT2-203ENST00000449049 SPANXN5Q5MJ07 72 aa11.03□□□□□ -0.64
SHMT2-203ENST00000449049 PVRIGQ6DKI7 326 aa11.03□□□□□ -0.64
SHMT2-203ENST00000449049 OR2T6Q8NHC8 308 aa11.03□□□□□ -0.64
SHMT2-203ENST00000449049 P2RX4Q99571 388 aa11.03□□□□□ -0.64
SHMT2-203ENST00000449049 C16orf95Q9H693 158 aa11.03□□□□□ -0.64
SHMT2-203ENST00000449049 SERTAD4Q9NUC0 356 aa11.03□□□□□ -0.64
SHMT2-203ENST00000449049 STRAPQ9Y3F4 350 aaKnown RBP11.03□□□□□ -0.64
SHMT2-203ENST00000449049 F11RQ9Y624 299 aaKnown RBP11.03□□□□□ -0.64
SHMT2-203ENST00000449049 PLXNB1O43157 2135 aa11.02□□□□□ -0.64
SHMT2-203ENST00000449049 IFNA10P01566 189 aa11.02□□□□□ -0.64
SHMT2-203ENST00000449049 CXCL2P19875 107 aa11.02□□□□□ -0.64
SHMT2-203ENST00000449049 NPY1RP25929 384 aa11.02□□□□□ -0.64
SHMT2-203ENST00000449049 PPIFP30405 207 aaKnown RBP11.02□□□□□ -0.64
SHMT2-203ENST00000449049 ARSJQ5FYB0 599 aaPredicted RBP11.02□□□□□ -0.64
SHMT2-203ENST00000449049 TMEM14EPQ6UXP3 125 aa11.02□□□□□ -0.64
SHMT2-203ENST00000449049 TAF15Q92804 592 aaKnown RBP eCLIP11.02□□□□□ -0.64
SHMT2-203ENST00000449049 FXYD6-FXYD2A0A087WZ82 144 aa11.02□□□□□ -0.65
SHMT2-203ENST00000449049 FAM24AA6NFZ4 105 aa11.02□□□□□ -0.65
SHMT2-203ENST00000449049 CAV2P51636 162 aa11.02□□□□□ -0.65
SHMT2-203ENST00000449049 SUB1P53999 127 aaKnown RBP eCLIP11.02□□□□□ -0.652e-7■■■□□ 15.5
SHMT2-203ENST00000449049 KLK9Q2XQG4 91 aa11.02□□□□□ -0.65
SHMT2-203ENST00000449049 FAM209BQ5JX69 171 aa11.02□□□□□ -0.65
SHMT2-203ENST00000449049 C19orf35Q6ZS72 473 aa11.02□□□□□ -0.65
SHMT2-203ENST00000449049 OR1P1Q8NH06 330 aa11.02□□□□□ -0.65
SHMT2-203ENST00000449049 KLK9Q9UKQ9 250 aa11.02□□□□□ -0.65
SHMT2-203ENST00000449049 TNFSF18Q9UNG2 199 aa11.02□□□□□ -0.65
SHMT2-203ENST00000449049 IGSF23A1L1A6 192 aa11.01□□□□□ -0.65
SHMT2-203ENST00000449049 HMSDA8MTL9 139 aa11.01□□□□□ -0.65
SHMT2-203ENST00000449049 SOX15O60248 233 aa11.01□□□□□ -0.65
SHMT2-203ENST00000449049 NMBP08949 121 aa11.01□□□□□ -0.65
SHMT2-203ENST00000449049 MFAP2P55001 183 aa11.01□□□□□ -0.65
SHMT2-203ENST00000449049 SRSF2Q01130 221 aaKnown RBP11.01□□□□□ -0.65
SHMT2-203ENST00000449049 ZNF546Q86UE3 836 aa11.01□□□□□ -0.65
SHMT2-203ENST00000449049 TMEM252Q8N6L7 170 aa11.01□□□□□ -0.65
SHMT2-203ENST00000449049 OR5T1Q8NG75 326 aa11.01□□□□□ -0.65
SHMT2-203ENST00000449049 OR1L6Q8NGR2 347 aa11.01□□□□□ -0.65
SHMT2-203ENST00000449049 WNT10AQ9GZT5 417 aa11.01□□□□□ -0.65
SHMT2-203ENST00000449049 DMRT1Q9Y5R6 373 aa11.01□□□□□ -0.65
SHMT2-203ENST00000449049 PMS2P5A8MQ11 134 aa11□□□□□ -0.65
SHMT2-203ENST00000449049 BRI3O95415 125 aa11□□□□□ -0.65
SHMT2-203ENST00000449049 HKR1P10072 659 aa11□□□□□ -0.65
SHMT2-203ENST00000449049 CXorf58Q96LI9 332 aa11□□□□□ -0.65
SHMT2-203ENST00000449049 PFDN2Q9UHV9 154 aa11□□□□□ -0.65
SHMT2-203ENST00000449049 OR8U8P0C7N1 319 aa11□□□□□ -0.65
SHMT2-203ENST00000449049 RPL12P30050 165 aaKnown RBP11□□□□□ -0.65
SHMT2-203ENST00000449049 RAB11AP62491 216 aa11□□□□□ -0.65
SHMT2-203ENST00000449049 FANCD2OSQ96PS1 177 aa11□□□□□ -0.65
SHMT2-203ENST00000449049 AQP10Q96PS8 301 aa11□□□□□ -0.65
SHMT2-203ENST00000449049 SLC25A31Q9H0C2 315 aa11□□□□□ -0.65
SHMT2-203ENST00000449049 IGLV11-55A0A075B6I3 123 aa10.99□□□□□ -0.65
SHMT2-203ENST00000449049 RNF222A6NCQ9 220 aa10.99□□□□□ -0.65
SHMT2-203ENST00000449049 H3BUA1 57 aa10.99□□□□□ -0.65
SHMT2-203ENST00000449049 IGLV1-40P01703 118 aa10.99□□□□□ -0.65
SHMT2-203ENST00000449049 METTL15P1P0C7V9 234 aa10.99□□□□□ -0.65
SHMT2-203ENST00000449049 DEFA4P12838 97 aa10.99□□□□□ -0.65
SHMT2-203ENST00000449049 SULT1A1P50225 295 aa10.99□□□□□ -0.65
SHMT2-203ENST00000449049 EWSR1Q01844 656 aaKnown RBP eCLIP10.99□□□□□ -0.65
SHMT2-203ENST00000449049 EIF4E3Q8N5X7 224 aaKnown RBP10.99□□□□□ -0.65
SHMT2-203ENST00000449049 LINC01006Q8NI28 216 aa10.99□□□□□ -0.65
SHMT2-203ENST00000449049 SCARB1Q8WTV0 552 aa10.99□□□□□ -0.65
SHMT2-203ENST00000449049 PRSS46E5RG02 174 aa10.99□□□□□ -0.65
SHMT2-203ENST00000449049 CORTO00230 105 aa10.99□□□□□ -0.65
SHMT2-203ENST00000449049 ARPC5O15511 151 aa10.99□□□□□ -0.65
SHMT2-203ENST00000449049 SCAF4O95104 1147 aaKnown RBP10.99□□□□□ -0.65
SHMT2-203ENST00000449049 IGHG4P01861 327 aa10.99□□□□□ -0.65
SHMT2-203ENST00000449049 PRH1P02810 166 aa10.99□□□□□ -0.65
SHMT2-203ENST00000449049 BAXQ07812 192 aa10.99□□□□□ -0.65
SHMT2-203ENST00000449049 ETV3LQ6ZN32 361 aa10.99□□□□□ -0.65
SHMT2-203ENST00000449049 HAPLN4Q86UW8 402 aa10.99□□□□□ -0.65
SHMT2-203ENST00000449049 STX12Q86Y82 276 aa10.99□□□□□ -0.65
SHMT2-203ENST00000449049 RNASEH2CQ8TDP1 164 aaKnown RBP10.99□□□□□ -0.65
SHMT2-203ENST00000449049 MTORP42345 2549 aa10.98□□□□□ -0.65
SHMT2-203ENST00000449049 TRBV9A0A0B4J1U6 114 aa10.98□□□□□ -0.65
SHMT2-203ENST00000449049 CYB5BO43169 146 aa10.98□□□□□ -0.65
SHMT2-203ENST00000449049 HIST1H1BP16401 226 aaKnown RBP10.98□□□□□ -0.65
SHMT2-203ENST00000449049 SLC35B1P78383 322 aa10.98□□□□□ -0.65
SHMT2-203ENST00000449049 SLC25A24Q6NUK1 477 aa10.98□□□□□ -0.65
SHMT2-203ENST00000449049 ACOT7LQ6ZUV0 252 aa10.98□□□□□ -0.65
SHMT2-203ENST00000449049 INO80EQ8NBZ0 244 aaPredicted RBP10.98□□□□□ -0.65
SHMT2-203ENST00000449049 OR4F5Q8NH21 305 aa10.98□□□□□ -0.65
SHMT2-203ENST00000449049 MAST4O15021 2626 aa10.98□□□□□ -0.65
SHMT2-203ENST00000449049 TMEM89A2RUT3 159 aa10.97□□□□□ -0.65
SHMT2-203ENST00000449049 PSMB11A5LHX3 300 aa10.97□□□□□ -0.65
SHMT2-203ENST00000449049 CST7O76096 145 aa10.97□□□□□ -0.65
SHMT2-203ENST00000449049 IFNA4P05014 189 aa10.97□□□□□ -0.65
SHMT2-203ENST00000449049 S100A11P31949 105 aa10.97□□□□□ -0.65
SHMT2-203ENST00000449049 ARL16Q0P5N6 197 aa10.97□□□□□ -0.65
SHMT2-203ENST00000449049 ZNF345Q14585 488 aa10.97□□□□□ -0.65
SHMT2-203ENST00000449049 ZNF329Q86UD4 541 aa10.97□□□□□ -0.65
SHMT2-203ENST00000449049 NHLH2Q02577 135 aa10.97□□□□□ -0.65
SHMT2-203ENST00000449049 C10orf99Q6UWK7 81 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms