RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 MANBALQ9NQG1 85 aa8.47□□□□□ -1.05
VIPAS39-203ENST00000448935 GNG13Q9P2W3 67 aa8.47□□□□□ -1.05
VIPAS39-203ENST00000448935 VAX2Q9UIW0 290 aa8.47□□□□□ -1.05
VIPAS39-203ENST00000448935 HILPDAQ9Y5L2 63 aa8.47□□□□□ -1.05
VIPAS39-203ENST00000448935 CGB1A6NKQ9 187 aa8.47□□□□□ -1.05
VIPAS39-203ENST00000448935 NDUFA3O95167 84 aa8.47□□□□□ -1.05
VIPAS39-203ENST00000448935 MT-CO2P00403 227 aa8.47□□□□□ -1.05
VIPAS39-203ENST00000448935 IGKV1D-33P01593 117 aa8.47□□□□□ -1.05
VIPAS39-203ENST00000448935 IGKV1-33P01594 117 aa8.47□□□□□ -1.05
VIPAS39-203ENST00000448935 RNF224P0DH78 156 aa8.47□□□□□ -1.05
VIPAS39-203ENST00000448935 PAX1P15863 534 aa8.47□□□□□ -1.05
VIPAS39-203ENST00000448935 PSMB3P49720 205 aa8.47□□□□□ -1.05
VIPAS39-203ENST00000448935 WT1-ASQ06250 92 aa8.47□□□□□ -1.05
VIPAS39-203ENST00000448935 BTN1A1Q13410 526 aa8.47□□□□□ -1.05
VIPAS39-203ENST00000448935 ICAM4Q14773 271 aa8.47□□□□□ -1.05
VIPAS39-203ENST00000448935 MMDQ15546 238 aa8.47□□□□□ -1.05
VIPAS39-203ENST00000448935 GUCA2BQ16661 112 aa8.47□□□□□ -1.05
VIPAS39-203ENST00000448935 MRGPRG-AS1Q2M3A8 158 aa8.47□□□□□ -1.05
VIPAS39-203ENST00000448935 SLC16A13Q7RTY0 426 aa8.47□□□□□ -1.05
VIPAS39-203ENST00000448935 NPBQ8NG41 125 aa8.47□□□□□ -1.05
VIPAS39-203ENST00000448935 C22orf15Q8WYQ4 148 aa8.47□□□□□ -1.05
VIPAS39-203ENST00000448935 RARRES2Q99969 163 aa8.47□□□□□ -1.05
VIPAS39-203ENST00000448935 C19orf24Q9BVV8 132 aa8.47□□□□□ -1.05
VIPAS39-203ENST00000448935 SLC25A22Q9H936 323 aa8.47□□□□□ -1.05
VIPAS39-203ENST00000448935 TPSG1Q9NRR2 321 aa8.47□□□□□ -1.05
VIPAS39-203ENST00000448935 HRNRQ86YZ3 2850 aaPredicted RBP8.47□□□□□ -1.05
VIPAS39-203ENST00000448935 SMG1Q96Q15 3661 aaKnown RBP8.46□□□□□ -1.05
VIPAS39-203ENST00000448935 RELNP78509 3460 aa8.46□□□□□ -1.06
VIPAS39-203ENST00000448935 IGLC7A0M8Q6 106 aa8.46□□□□□ -1.06
VIPAS39-203ENST00000448935 ZFP92A6NM28 416 aa8.46□□□□□ -1.06
VIPAS39-203ENST00000448935 VWC2LB2RUY7 222 aa8.46□□□□□ -1.06
VIPAS39-203ENST00000448935 ZNF561-AS1K7EIQ3 104 aa8.46□□□□□ -1.06
VIPAS39-203ENST00000448935 SRP19P09132 144 aaKnown RBP8.46□□□□□ -1.06
VIPAS39-203ENST00000448935 CNTFRP26992 372 aa8.46□□□□□ -1.06
VIPAS39-203ENST00000448935 BRS3P32247 399 aa8.46□□□□□ -1.06
VIPAS39-203ENST00000448935 FGF8P55075 233 aaPredicted RBP8.46□□□□□ -1.06
VIPAS39-203ENST00000448935 RHOBP62745 196 aa8.46□□□□□ -1.06
VIPAS39-203ENST00000448935 GAMTQ14353 236 aa8.46□□□□□ -1.06
VIPAS39-203ENST00000448935 HES1Q14469 280 aa8.46□□□□□ -1.06
VIPAS39-203ENST00000448935 SSX2Q16385 188 aa8.46□□□□□ -1.06
VIPAS39-203ENST00000448935 C10orf55Q5SWW7 151 aa8.46□□□□□ -1.06
VIPAS39-203ENST00000448935 LDLRAD2Q5SZI1 272 aa8.46□□□□□ -1.06
VIPAS39-203ENST00000448935 LHFPL4Q7Z7J7 247 aa8.46□□□□□ -1.06
VIPAS39-203ENST00000448935 OR1L6Q8NGR2 347 aa8.46□□□□□ -1.06
VIPAS39-203ENST00000448935 NANPQ8TBE9 248 aa8.46□□□□□ -1.06
VIPAS39-203ENST00000448935 RXFP4Q8TDU9 374 aa8.46□□□□□ -1.06
VIPAS39-203ENST00000448935 FBXL15Q9H469 300 aa8.46□□□□□ -1.06
VIPAS39-203ENST00000448935 FBXL7Q9UJT9 491 aa8.46□□□□□ -1.06
VIPAS39-203ENST00000448935 TNCP24821 2201 aa8.46□□□□□ -1.06
VIPAS39-203ENST00000448935 CYSRT1A8MQ03 144 aa8.45□□□□□ -1.06
VIPAS39-203ENST00000448935 E7EUB6 86 aa8.45□□□□□ -1.06
VIPAS39-203ENST00000448935 GNB1P62873 340 aa8.45□□□□□ -1.06
VIPAS39-203ENST00000448935 EBI3Q14213 229 aa8.45□□□□□ -1.06
VIPAS39-203ENST00000448935 MIC13Q5XKP0 118 aa8.45□□□□□ -1.06
VIPAS39-203ENST00000448935 PVRIGQ6DKI7 326 aa8.45□□□□□ -1.06
VIPAS39-203ENST00000448935 ATRAIDQ6UW56 229 aa8.45□□□□□ -1.06
VIPAS39-203ENST00000448935 SSX7Q7RTT5 188 aa8.45□□□□□ -1.06
VIPAS39-203ENST00000448935 SLC35E3Q7Z769 313 aa8.45□□□□□ -1.06
VIPAS39-203ENST00000448935 STPG3Q8N7X2 389 aa8.45□□□□□ -1.06
VIPAS39-203ENST00000448935 OR1P1Q8NH06 330 aa8.45□□□□□ -1.06
VIPAS39-203ENST00000448935 SRSF12Q8WXF0 261 aaKnown RBP8.45□□□□□ -1.06
VIPAS39-203ENST00000448935 TBX15Q96SF7 602 aa8.45□□□□□ -1.06
VIPAS39-203ENST00000448935 RNF2Q99496 336 aa8.45□□□□□ -1.06
VIPAS39-203ENST00000448935 CDIP1Q9H305 208 aa8.45□□□□□ -1.06
VIPAS39-203ENST00000448935 AP5S1Q9NUS5 200 aa8.45□□□□□ -1.06
VIPAS39-203ENST00000448935 C1RLQ9NZP8 487 aa8.45□□□□□ -1.06
VIPAS39-203ENST00000448935 NAV2Q8IVL1 2488 aa8.44□□□□□ -1.06
VIPAS39-203ENST00000448935 A0A1W2PRD5 423 aa8.44□□□□□ -1.06
VIPAS39-203ENST00000448935 A0A1W2PRF3 423 aa8.44□□□□□ -1.06
VIPAS39-203ENST00000448935 A0A1W2PRM7 423 aa8.44□□□□□ -1.06
VIPAS39-203ENST00000448935 YIF1AO95070 293 aa8.44□□□□□ -1.06
VIPAS39-203ENST00000448935 CNIH1O95406 144 aa8.44□□□□□ -1.06
VIPAS39-203ENST00000448935 CXorf1O96002 111 aa8.44□□□□□ -1.06
VIPAS39-203ENST00000448935 FAM106CPP0CH98 169 aa8.44□□□□□ -1.06
VIPAS39-203ENST00000448935 RPL11P62913 178 aaKnown RBP8.44□□□□□ -1.06
VIPAS39-203ENST00000448935 SSMEM1Q8WWF3 244 aa8.44□□□□□ -1.06
VIPAS39-203ENST00000448935 TXNDC17Q9BRA2 123 aa8.44□□□□□ -1.06
VIPAS39-203ENST00000448935 SLC45A2Q9UMX9 530 aa8.44□□□□□ -1.06
VIPAS39-203ENST00000448935 ARHGAP32A7KAX9 2087 aa8.44□□□□□ -1.06
VIPAS39-203ENST00000448935 DOPEY1Q5JWR5 2465 aa8.44□□□□□ -1.06
VIPAS39-203ENST00000448935 SLC25A16P16260 332 aa8.43□□□□□ -1.06
VIPAS39-203ENST00000448935 OR10J1P30954 320 aa8.43□□□□□ -1.06
VIPAS39-203ENST00000448935 SELENOTP62341 195 aa8.43□□□□□ -1.06
VIPAS39-203ENST00000448935 MEF2BQ02080 365 aaPredicted RBP8.43□□□□□ -1.06
VIPAS39-203ENST00000448935 PAX8Q06710 450 aa8.43□□□□□ -1.06
VIPAS39-203ENST00000448935 RHEBQ15382 184 aa8.43□□□□□ -1.06
VIPAS39-203ENST00000448935 C5orf64Q2M2E5 130 aa8.43□□□□□ -1.06
VIPAS39-203ENST00000448935 IQCF2Q8IXL9 164 aa8.43□□□□□ -1.06
VIPAS39-203ENST00000448935 ABHD5Q8WTS1 349 aa8.43□□□□□ -1.06
VIPAS39-203ENST00000448935 F11RQ9Y624 299 aaKnown RBP8.43□□□□□ -1.06
VIPAS39-203ENST00000448935 IGHV4-61A0A0C4DH41 118 aa8.43□□□□□ -1.06
VIPAS39-203ENST00000448935 TEX22C9J3V5 150 aa8.43□□□□□ -1.06
VIPAS39-203ENST00000448935 TMEM250H0YL14 139 aa8.43□□□□□ -1.06
VIPAS39-203ENST00000448935 DNASE2O00115 360 aaPredicted RBP8.43□□□□□ -1.06
VIPAS39-203ENST00000448935 NPFFO15130 113 aa8.43□□□□□ -1.06
VIPAS39-203ENST00000448935 STAG3L2P0CL84 134 aa8.43□□□□□ -1.06
VIPAS39-203ENST00000448935 STAG3L3P0CL85 134 aa8.43□□□□□ -1.06
VIPAS39-203ENST00000448935 TMEM11P17152 192 aa8.43□□□□□ -1.06
VIPAS39-203ENST00000448935 NPBWR1P48145 328 aa8.43□□□□□ -1.06
VIPAS39-203ENST00000448935 CYP2G1PQ6ZSU1 146 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms