RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 UTP20O75691 2785 aaKnown RBP12□□□□□ -0.49
SF1-211ENST00000448404 CCL21O00585 134 aa12□□□□□ -0.49
SF1-211ENST00000448404 MBP02144 154 aa12□□□□□ -0.49
SF1-211ENST00000448404 FAM78BQ5VT40 261 aa12□□□□□ -0.49
SF1-211ENST00000448404 PIEZO1Q92508 2521 aa12□□□□□ -0.49
SF1-211ENST00000448404 TRAV5A0A0B4J249 113 aa12□□□□□ -0.49
SF1-211ENST00000448404 HRASP01112 189 aa12□□□□□ -0.49
SF1-211ENST00000448404 CD24P25063 80 aa12□□□□□ -0.49
SF1-211ENST00000448404 RTL8BQ17RB0 113 aa12□□□□□ -0.49
SF1-211ENST00000448404 CYP2G1PQ6ZSU1 146 aa12□□□□□ -0.49
SF1-211ENST00000448404 OR10A7Q8NGE5 316 aa12□□□□□ -0.49
SF1-211ENST00000448404 NEIL1Q96FI4 390 aaPredicted RBP12□□□□□ -0.49
SF1-211ENST00000448404 NPVFQ9HCQ7 196 aa12□□□□□ -0.49
SF1-211ENST00000448404 PPP1R14DQ9NXH3 145 aa12□□□□□ -0.49
SF1-211ENST00000448404 PITPNC1Q9UKF7 332 aa12□□□□□ -0.49
SF1-211ENST00000448404 SSUH2Q9Y2M2 353 aa12□□□□□ -0.49
SF1-211ENST00000448404 PKD1L2Q7Z442 2459 aa12□□□□□ -0.49
SF1-211ENST00000448404 ZFYVE26Q68DK2 2539 aa11.99□□□□□ -0.49
SF1-211ENST00000448404 IGHV1-69-2A0A0G2JMI3 117 aa11.99□□□□□ -0.49
SF1-211ENST00000448404 OR10J1P30954 320 aa11.99□□□□□ -0.49
SF1-211ENST00000448404 PCP4P48539 62 aa11.99□□□□□ -0.49
SF1-211ENST00000448404 HCP5Q6MZN7 132 aa11.99□□□□□ -0.49
SF1-211ENST00000448404 TEPPQ6URK8 271 aa11.99□□□□□ -0.49
SF1-211ENST00000448404 OR52E5Q8NH55 327 aa11.99□□□□□ -0.49
SF1-211ENST00000448404 P2RX4Q99571 388 aa11.99□□□□□ -0.49
SF1-211ENST00000448404 CBLN4Q9NTU7 201 aa11.99□□□□□ -0.49
SF1-211ENST00000448404 CFAP46Q8IYW2 2715 aa11.99□□□□□ -0.49
SF1-211ENST00000448404 LRRC10Q5BKY1 277 aa11.99□□□□□ -0.49
SF1-211ENST00000448404 C11orf42Q8N5U0 333 aa11.99□□□□□ -0.49
SF1-211ENST00000448404 OR4X1Q8NH49 305 aa11.99□□□□□ -0.49
SF1-211ENST00000448404 CORO2AQ92828 525 aa11.99□□□□□ -0.49
SF1-211ENST00000448404 UHRF2Q96PU4 802 aa11.99□□□□□ -0.49
SF1-211ENST00000448404 GAL3ST2Q9H3Q3 398 aa11.99□□□□□ -0.49
SF1-211ENST00000448404 CGB1A6NKQ9 187 aa11.98□□□□□ -0.49
SF1-211ENST00000448404 OPRK1P41145 380 aa11.98□□□□□ -0.49
SF1-211ENST00000448404 WT1-ASQ06250 92 aa11.98□□□□□ -0.49
SF1-211ENST00000448404 ZNF833PQ6ZTB9 187 aa11.98□□□□□ -0.49
SF1-211ENST00000448404 TMEM183AQ8IXX5 376 aa11.98□□□□□ -0.49
SF1-211ENST00000448404 KIR2DS2P43631 304 aa11.98□□□□□ -0.49
SF1-211ENST00000448404 LY6DQ14210 128 aa11.98□□□□□ -0.49
SF1-211ENST00000448404 BEND2Q8NDZ0 799 aa11.98□□□□□ -0.49
SF1-211ENST00000448404 A0A1B0GUS0 222 aa11.97□□□□□ -0.49
SF1-211ENST00000448404 H7BYZ3 331 aa11.97□□□□□ -0.49
SF1-211ENST00000448404 LINC00869P0C866 280 aa11.97□□□□□ -0.49
SF1-211ENST00000448404 GALR1P47211 349 aa11.97□□□□□ -0.49
SF1-211ENST00000448404 PRCDQ00LT1 54 aa11.97□□□□□ -0.49
SF1-211ENST00000448404 FLYWCH2Q96CP2 140 aaKnown RBP11.97□□□□□ -0.49
SF1-211ENST00000448404 GSX1Q9H4S2 264 aaPredicted RBP11.97□□□□□ -0.49
SF1-211ENST00000448404 ZNF430Q9H8G1 570 aaPredicted RBP11.97□□□□□ -0.49
SF1-211ENST00000448404 CD3EP07766 207 aa11.97□□□□□ -0.49
SF1-211ENST00000448404 FRMD6-AS1P0C7T7 363 aa11.97□□□□□ -0.49
SF1-211ENST00000448404 RNASE2P10153 161 aaKnown RBP11.97□□□□□ -0.49
SF1-211ENST00000448404 RPP30P78346 268 aaKnown RBP11.97□□□□□ -0.49
SF1-211ENST00000448404 NABP2Q9BQ15 211 aa11.97□□□□□ -0.49
SF1-211ENST00000448404 COMMD5Q9GZQ3 224 aa11.97□□□□□ -0.49
SF1-211ENST00000448404 FNDC4Q9H6D8 234 aaPredicted RBP11.97□□□□□ -0.49
SF1-211ENST00000448404 CELSR2Q9HCU4 2923 aa11.96□□□□□ -0.49
SF1-211ENST00000448404 TNFRSF13BO14836 293 aaPredicted RBP11.96□□□□□ -0.49
SF1-211ENST00000448404 STAG3L2P0CL84 134 aa11.96□□□□□ -0.49
SF1-211ENST00000448404 STAG3L3P0CL85 134 aa11.96□□□□□ -0.49
SF1-211ENST00000448404 ZNF90Q03938 601 aa11.96□□□□□ -0.49
SF1-211ENST00000448404 MUC15Q8N387 334 aa11.96□□□□□ -0.49
SF1-211ENST00000448404 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.96□□□□□ -0.49
SF1-211ENST00000448404 LINC00574Q9H8X3 128 aa11.96□□□□□ -0.49
SF1-211ENST00000448404 MANBALQ9NQG1 85 aa11.96□□□□□ -0.49
SF1-211ENST00000448404 FLNCQ14315 2725 aa11.96□□□□□ -0.49
SF1-211ENST00000448404 FAM90A9PA6NNJ1 464 aa11.96□□□□□ -0.49
SF1-211ENST00000448404 RPL8P62917 257 aaKnown RBP11.96□□□□□ -0.49
SF1-211ENST00000448404 PNRC1Q12796 327 aaPredicted RBP11.96□□□□□ -0.49
SF1-211ENST00000448404 OR5I1Q13606 314 aa11.96□□□□□ -0.49
SF1-211ENST00000448404 PRNDQ9UKY0 176 aa11.96□□□□□ -0.49
SF1-211ENST00000448404 XKRY2A2RUG3 117 aa11.96□□□□□ -0.5
SF1-211ENST00000448404 A6NNC1 897 aa11.96□□□□□ -0.5
SF1-211ENST00000448404 ITGB1BP1O14713 200 aa11.96□□□□□ -0.5
SF1-211ENST00000448404 PFN1P07737 140 aaKnown RBP11.96□□□□□ -0.5
SF1-211ENST00000448404 GCHFRP30047 84 aa11.96□□□□□ -0.5
SF1-211ENST00000448404 PSG5Q15238 335 aa11.96□□□□□ -0.5
SF1-211ENST00000448404 HLA-DRB5Q30154 266 aa11.96□□□□□ -0.5
SF1-211ENST00000448404 PRR31Q5SQ13 230 aa11.96□□□□□ -0.5
SF1-211ENST00000448404 LINC01551Q86U37 167 aa11.96□□□□□ -0.5
SF1-211ENST00000448404 OR1P1Q8NH06 330 aa11.96□□□□□ -0.5
SF1-211ENST00000448404 TMEM37Q8WXS4 190 aa11.96□□□□□ -0.5
SF1-211ENST00000448404 DIRC2Q96SL1 478 aa11.96□□□□□ -0.5
SF1-211ENST00000448404 VKORC1Q9BQB6 163 aa11.96□□□□□ -0.5
SF1-211ENST00000448404 TMEM250H0YL14 139 aa11.95□□□□□ -0.5
SF1-211ENST00000448404 SLC17A3O00476 420 aa11.95□□□□□ -0.5
SF1-211ENST00000448404 APOA2P02652 100 aa11.95□□□□□ -0.5
SF1-211ENST00000448404 IGHV1-8P0DP01 117 aa11.95□□□□□ -0.5
SF1-211ENST00000448404 APOBEC3AP31941 199 aaPredicted RBP11.95□□□□□ -0.5
SF1-211ENST00000448404 RND2P52198 227 aa11.95□□□□□ -0.5
SF1-211ENST00000448404 DLX6P56179 175 aa11.95□□□□□ -0.5
SF1-211ENST00000448404 FBLN7Q53RD9 439 aa11.95□□□□□ -0.5
SF1-211ENST00000448404 ADTRPQ96IZ2 230 aa11.95□□□□□ -0.5
SF1-211ENST00000448404 CENPEQ02224 2701 aa11.95□□□□□ -0.5
SF1-211ENST00000448404 OR7C2O60412 319 aa11.95□□□□□ -0.5
SF1-211ENST00000448404 NPSP0C0P6 89 aa11.95□□□□□ -0.5
SF1-211ENST00000448404 TMPRSS3P57727 454 aa11.95□□□□□ -0.5
SF1-211ENST00000448404 NHLH1Q02575 133 aa11.95□□□□□ -0.5
SF1-211ENST00000448404 LDLRAD2Q5SZI1 272 aa11.95□□□□□ -0.5
SF1-211ENST00000448404 NHLRC2Q8NBF2 726 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms