RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 TXN2Q99757 166 aa20.84■□□□□ 0.93
CBX4-202ENST00000448310 GNG7O60262 68 aa20.83■□□□□ 0.93
CBX4-202ENST00000448310 HPGDSO60760 199 aa20.83■□□□□ 0.93
CBX4-202ENST00000448310 HSPE1P61604 102 aaKnown RBP20.83■□□□□ 0.93
CBX4-202ENST00000448310 VBP1P61758 197 aa20.83■□□□□ 0.93
CBX4-202ENST00000448310 C6orf62Q9GZU0 229 aaPredicted RBP20.83■□□□□ 0.93
CBX4-202ENST00000448310 KMT2AQ03164 3969 aa20.82■□□□□ 0.92
CBX4-202ENST00000448310 TRAV14DV4A0A0A6YYC5 116 aa20.82■□□□□ 0.92
CBX4-202ENST00000448310 FAM90A2PQ658T7 463 aa20.82■□□□□ 0.92
CBX4-202ENST00000448310 FUNDC2Q9BWH2 189 aa20.82■□□□□ 0.92
CBX4-202ENST00000448310 ATF4P18848 351 aaPredicted RBP20.81■□□□□ 0.92
CBX4-202ENST00000448310 PI3P19957 117 aa20.81■□□□□ 0.92
CBX4-202ENST00000448310 ERHP84090 104 aaKnown RBP20.81■□□□□ 0.92
CBX4-202ENST00000448310 CMTM3Q96MX0 182 aa20.81■□□□□ 0.92
CBX4-202ENST00000448310 CSTL1Q9H114 145 aa20.81■□□□□ 0.92
CBX4-202ENST00000448310 FRAS1Q86XX4 4008 aa20.81■□□□□ 0.92
CBX4-202ENST00000448310 TNFAIP8O95379 198 aa20.8■□□□□ 0.92
CBX4-202ENST00000448310 TOMM20LQ6UXN7 152 aa20.8■□□□□ 0.92
CBX4-202ENST00000448310 TCF24Q7RTU0 167 aa20.8■□□□□ 0.92
CBX4-202ENST00000448310 TMEM217Q8N7C4 229 aa20.8■□□□□ 0.92
CBX4-202ENST00000448310 KLK5Q9Y337 293 aaPredicted RBP20.8■□□□□ 0.92
CBX4-202ENST00000448310 IGKV1-5P01602 117 aa20.79■□□□□ 0.92
CBX4-202ENST00000448310 APOHP02749 345 aaPredicted RBP20.79■□□□□ 0.92
CBX4-202ENST00000448310 PGAM2P15259 253 aa20.79■□□□□ 0.92
CBX4-202ENST00000448310 ST8SIA2Q92186 375 aa20.79■□□□□ 0.92
CBX4-202ENST00000448310 IGHV3-66A0A0C4DH42 116 aa20.78■□□□□ 0.92
CBX4-202ENST00000448310 MPTX1A8MV57 137 aa20.78■□□□□ 0.92
CBX4-202ENST00000448310 LILRB2Q8N423 598 aa20.78■□□□□ 0.92
CBX4-202ENST00000448310 PHLDA1Q8WV24 401 aaPredicted RBP20.78■□□□□ 0.92
CBX4-202ENST00000448310 CMC4P56277 68 aaPredicted RBP20.77■□□□□ 0.92
CBX4-202ENST00000448310 RND3P61587 244 aa20.77■□□□□ 0.92
CBX4-202ENST00000448310 TP53RKQ96S44 253 aa20.77■□□□□ 0.92
CBX4-202ENST00000448310 GINS3Q9BRX5 216 aa20.77■□□□□ 0.92
CBX4-202ENST00000448310 KLK11Q9UBX7 282 aa20.77■□□□□ 0.92
CBX4-202ENST00000448310 A0A0B4J293 547 aa20.76■□□□□ 0.91
CBX4-202ENST00000448310 FAM25AB3EWG3 89 aa20.76■□□□□ 0.91
CBX4-202ENST00000448310 FAM25CB3EWG5 89 aa20.76■□□□□ 0.91
CBX4-202ENST00000448310 FAM25GB3EWG6 89 aa20.76■□□□□ 0.91
CBX4-202ENST00000448310 PIGPP57054 158 aa20.76■□□□□ 0.91
CBX4-202ENST00000448310 SLC35G3Q8N808 338 aa20.76■□□□□ 0.91
CBX4-202ENST00000448310 DUSP18Q8NEJ0 188 aa20.76■□□□□ 0.91
CBX4-202ENST00000448310 RARRES2Q99969 163 aa20.76■□□□□ 0.91
CBX4-202ENST00000448310 ZFAND3Q9H8U3 227 aa20.76■□□□□ 0.91
CBX4-202ENST00000448310 PUS1Q9Y606 427 aaKnown RBP eCLIP20.76■□□□□ 0.91
CBX4-202ENST00000448310 ST8SIA3O43173 380 aa20.75■□□□□ 0.91
CBX4-202ENST00000448310 P0C879 139 aa20.75■□□□□ 0.91
CBX4-202ENST00000448310 SNCAP37840 140 aa20.75■□□□□ 0.91
CBX4-202ENST00000448310 NPBWR1P48145 328 aa20.75■□□□□ 0.91
CBX4-202ENST00000448310 AKR1C2P52895 323 aa20.75■□□□□ 0.91
CBX4-202ENST00000448310 PAFAH1B2P68402 229 aa20.75■□□□□ 0.91
CBX4-202ENST00000448310 RNASE10Q5GAN6 216 aaKnown RBP20.75■□□□□ 0.91
CBX4-202ENST00000448310 LHFPL1Q86WI0 220 aa20.75■□□□□ 0.91
CBX4-202ENST00000448310 VSIRQ9H7M9 311 aa20.75■□□□□ 0.91
CBX4-202ENST00000448310 DFFBO76075 338 aa20.74■□□□□ 0.91
CBX4-202ENST00000448310 IFNA17P01571 189 aa20.74■□□□□ 0.91
CBX4-202ENST00000448310 CD3DP04234 171 aa20.74■□□□□ 0.91
CBX4-202ENST00000448310 PPP5CP53041 499 aa20.74■□□□□ 0.91
CBX4-202ENST00000448310 LEMD1Q68G75 181 aa20.74■□□□□ 0.91
CBX4-202ENST00000448310 ZNF600Q6ZNG1 722 aa20.74■□□□□ 0.91
CBX4-202ENST00000448310 OR52I2Q8NH67 350 aa20.74■□□□□ 0.91
CBX4-202ENST00000448310 GATAD1Q8WUU5 269 aa20.74■□□□□ 0.91
CBX4-202ENST00000448310 ZNF486Q96H40 463 aaPredicted RBP20.74■□□□□ 0.91
CBX4-202ENST00000448310 MS4A6AQ9H2W1 248 aa20.74■□□□□ 0.91
CBX4-202ENST00000448310 A0A1B0GU03 582 aa20.73■□□□□ 0.91
CBX4-202ENST00000448310 RORCP51449 518 aa20.73■□□□□ 0.91
CBX4-202ENST00000448310 RPP25LQ8N5L8 163 aaKnown RBP20.73■□□□□ 0.91
CBX4-202ENST00000448310 FAM24BQ8N5W8 94 aa20.73■□□□□ 0.91
CBX4-202ENST00000448310 OR11H2Q8NH07 326 aa20.73■□□□□ 0.91
CBX4-202ENST00000448310 AGRNO00468 2067 aa20.73■□□□□ 0.91
CBX4-202ENST00000448310 DNASE2O00115 360 aaPredicted RBP20.72■□□□□ 0.91
CBX4-202ENST00000448310 TMEM50AO95807 157 aa20.72■□□□□ 0.91
CBX4-202ENST00000448310 CA1P00915 261 aaPredicted RBP20.72■□□□□ 0.91
CBX4-202ENST00000448310 RNASE2P10153 161 aaKnown RBP20.72■□□□□ 0.91
CBX4-202ENST00000448310 ETV6P41212 452 aa20.72■□□□□ 0.91
CBX4-202ENST00000448310 DEFB131AP59861 70 aa20.72■□□□□ 0.91
CBX4-202ENST00000448310 NANOS2P60321 138 aaKnown RBP20.72■□□□□ 0.91
CBX4-202ENST00000448310 RPL11P62913 178 aaKnown RBP20.72■□□□□ 0.91
CBX4-202ENST00000448310 SP6Q3SY56 376 aa20.72■□□□□ 0.91
CBX4-202ENST00000448310 MRPL36Q9P0J6 103 aaKnown RBP20.72■□□□□ 0.91
CBX4-202ENST00000448310 DNAH10Q8IVF4 4471 aa20.72■□□□□ 0.91
CBX4-202ENST00000448310 C3orf85A0A1B0GTC6 90 aa20.71■□□□□ 0.91
CBX4-202ENST00000448310 TRIM16LQ309B1 348 aa20.71■□□□□ 0.91
CBX4-202ENST00000448310 MZT2AQ6P582 158 aa20.71■□□□□ 0.91
CBX4-202ENST00000448310 OR4D10Q8NGI6 311 aa20.71■□□□□ 0.91
CBX4-202ENST00000448310 PDCD10Q9BUL8 212 aa20.71■□□□□ 0.91
CBX4-202ENST00000448310 NAA50Q9GZZ1 169 aaKnown RBP20.71■□□□□ 0.91
CBX4-202ENST00000448310 A0A0G2JRQ6 117 aa20.7■□□□□ 0.9
CBX4-202ENST00000448310 INS-IGF2F8WCM5 200 aa20.7■□□□□ 0.9
CBX4-202ENST00000448310 DEFB4AO15263 64 aa20.7■□□□□ 0.9
CBX4-202ENST00000448310 DEDDO75618 318 aa20.7■□□□□ 0.9
CBX4-202ENST00000448310 HOXA1P49639 335 aaPredicted RBP20.7■□□□□ 0.9
CBX4-202ENST00000448310 PVRIGQ6DKI7 326 aa20.7■□□□□ 0.9
CBX4-202ENST00000448310 ARRDC1Q8N5I2 433 aa20.7■□□□□ 0.9
CBX4-202ENST00000448310 EXTL2Q9UBQ6 330 aa20.7■□□□□ 0.9
CBX4-202ENST00000448310 FBXL17Q9UF56 701 aa20.7■□□□□ 0.9
CBX4-202ENST00000448310 CD5P06127 495 aa20.69■□□□□ 0.9
CBX4-202ENST00000448310 MLANAQ16655 118 aa20.69■□□□□ 0.9
CBX4-202ENST00000448310 FNDC4Q9H6D8 234 aaPredicted RBP20.69■□□□□ 0.9
CBX4-202ENST00000448310 COPZ2Q9P299 210 aa20.69■□□□□ 0.9
CBX4-202ENST00000448310 MTFP1Q9UDX5 166 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms