RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 RASL12Q9NYN1 266 aa2.31□□□□□ -2.04
PMS1-216ENST00000447734 LAMTOR2Q9Y2Q5 125 aa2.31□□□□□ -2.04
PMS1-216ENST00000447734 HEY1Q9Y5J3 304 aa2.31□□□□□ -2.04
PMS1-216ENST00000447734 OBSCNQ5VST9 7968 aa2.31□□□□□ -2.04
PMS1-216ENST00000447734 NOTCH3Q9UM47 2321 aa2.3□□□□□ -2.04
PMS1-216ENST00000447734 A0A1W2PQD3 144 aa2.3□□□□□ -2.04
PMS1-216ENST00000447734 ZNF860A6NHJ4 632 aa2.3□□□□□ -2.04
PMS1-216ENST00000447734 COLCA2A8K830 154 aa2.3□□□□□ -2.04
PMS1-216ENST00000447734 H3BPC8 53 aa2.3□□□□□ -2.04
PMS1-216ENST00000447734 RPL36A-HNRNPH2H7BZ11 118 aa2.3□□□□□ -2.04
PMS1-216ENST00000447734 TP53I11O14683 189 aa2.3□□□□□ -2.04
PMS1-216ENST00000447734 TAX1BP3O14907 124 aa2.3□□□□□ -2.04
PMS1-216ENST00000447734 CREBL2O60519 120 aaPredicted RBP2.3□□□□□ -2.04
PMS1-216ENST00000447734 IGHV3-7P01780 117 aa2.3□□□□□ -2.04
PMS1-216ENST00000447734 RPL7P18124 248 aaKnown RBP2.3□□□□□ -2.04
PMS1-216ENST00000447734 NFYBP25208 207 aa2.3□□□□□ -2.04
PMS1-216ENST00000447734 YPEL3P61236 119 aaPredicted RBP2.3□□□□□ -2.04
PMS1-216ENST00000447734 RPS28P62857 69 aaKnown RBP2.3□□□□□ -2.04
PMS1-216ENST00000447734 EIF5AP63241 154 aaKnown RBP2.3□□□□□ -2.04
PMS1-216ENST00000447734 ZNF141Q15928 474 aa2.3□□□□□ -2.04
PMS1-216ENST00000447734 DEFB115Q30KQ5 88 aa2.3□□□□□ -2.04
PMS1-216ENST00000447734 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.3□□□□□ -2.04
PMS1-216ENST00000447734 LCE1FQ5T754 118 aa2.3□□□□□ -2.04
PMS1-216ENST00000447734 ANGPTL5Q86XS5 388 aa2.3□□□□□ -2.04
PMS1-216ENST00000447734 LYPD6Q86Y78 171 aa2.3□□□□□ -2.04
PMS1-216ENST00000447734 ZNF561Q8N587 486 aa2.3□□□□□ -2.04
PMS1-216ENST00000447734 OR52R1Q8NGF1 315 aa2.3□□□□□ -2.04
PMS1-216ENST00000447734 OR4D11Q8NGI4 311 aa2.3□□□□□ -2.04
PMS1-216ENST00000447734 OR8D4Q8NGM9 314 aa2.3□□□□□ -2.04
PMS1-216ENST00000447734 FGF13Q92913 245 aa2.3□□□□□ -2.04
PMS1-216ENST00000447734 TSC22D3Q99576 134 aa2.3□□□□□ -2.04
PMS1-216ENST00000447734 RTL8AQ9BWD3 113 aa2.3□□□□□ -2.04
PMS1-216ENST00000447734 OR8D2Q9GZM6 311 aa2.3□□□□□ -2.04
PMS1-216ENST00000447734 AICDAQ9GZX7 198 aa2.3□□□□□ -2.04
PMS1-216ENST00000447734 DUSP21Q9H596 190 aa2.3□□□□□ -2.04
PMS1-216ENST00000447734 TXNL4BQ9NX01 149 aaKnown RBP2.3□□□□□ -2.04
PMS1-216ENST00000447734 NUBP2Q9Y5Y2 271 aa2.3□□□□□ -2.04
PMS1-216ENST00000447734 SIPA1L1O43166 1804 aa2.3□□□□□ -2.04
PMS1-216ENST00000447734 COL18A1P39060 1754 aa2.29□□□□□ -2.04
PMS1-216ENST00000447734 COL2A1P02458 1487 aaPredicted RBP2.29□□□□□ -2.04
PMS1-216ENST00000447734 IGHV3-15A0A0B4J1V0 119 aa2.29□□□□□ -2.04
PMS1-216ENST00000447734 A0A0J9YW62 118 aa2.29□□□□□ -2.04
PMS1-216ENST00000447734 A0A1B0GU33 70 aa2.29□□□□□ -2.04
PMS1-216ENST00000447734 EFCAB10A6NFE3 127 aa2.29□□□□□ -2.04
PMS1-216ENST00000447734 J3KT08 172 aa2.29□□□□□ -2.04
PMS1-216ENST00000447734 GZMBP10144 247 aa2.29□□□□□ -2.04
PMS1-216ENST00000447734 CCL5P13501 91 aa2.29□□□□□ -2.04
PMS1-216ENST00000447734 ZNF22P17026 224 aaPredicted RBP2.29□□□□□ -2.04
PMS1-216ENST00000447734 CD24P25063 80 aa2.29□□□□□ -2.04
PMS1-216ENST00000447734 SRP14P37108 136 aaKnown RBP2.29□□□□□ -2.04
PMS1-216ENST00000447734 CCR2P41597 374 aa2.29□□□□□ -2.04
PMS1-216ENST00000447734 AKR1C3P42330 323 aa2.29□□□□□ -2.04
PMS1-216ENST00000447734 CKS1BP61024 79 aa2.29□□□□□ -2.04
PMS1-216ENST00000447734 LINC01554Q52M75 96 aa2.29□□□□□ -2.04
PMS1-216ENST00000447734 BCL2L15Q5TBC7 163 aa2.29□□□□□ -2.04
PMS1-216ENST00000447734 FKBP1CQ5VVH2 108 aa2.29□□□□□ -2.04
PMS1-216ENST00000447734 TMEM136Q6ZRR5 245 aa2.29□□□□□ -2.04
PMS1-216ENST00000447734 Q8NAQ8 132 aa2.29□□□□□ -2.04
PMS1-216ENST00000447734 TERB2Q8NHR7 220 aa2.29□□□□□ -2.04
PMS1-216ENST00000447734 ISOC1Q96CN7 298 aa2.29□□□□□ -2.04
PMS1-216ENST00000447734 SLAMF6Q96DU3 332 aa2.29□□□□□ -2.04
PMS1-216ENST00000447734 OR8B2Q96RD0 313 aa2.29□□□□□ -2.04
PMS1-216ENST00000447734 GPX7Q96SL4 187 aaPredicted RBP2.29□□□□□ -2.04
PMS1-216ENST00000447734 NAT8Q9UHE5 227 aa2.29□□□□□ -2.04
PMS1-216ENST00000447734 RBM7Q9Y580 266 aaKnown RBP2.29□□□□□ -2.04
PMS1-216ENST00000447734 ADAMTS9Q9P2N4 1935 aa2.29□□□□□ -2.04
PMS1-216ENST00000447734 CEP152O94986 1710 aa2.28□□□□□ -2.04
PMS1-216ENST00000447734 ZNF407Q9C0G0 2248 aa2.28□□□□□ -2.04
PMS1-216ENST00000447734 A0A087WX48 190 aa2.28□□□□□ -2.04
PMS1-216ENST00000447734 A0A087X0T9 212 aa2.28□□□□□ -2.04
PMS1-216ENST00000447734 BORCS7-ASMTA0A0B4J1R7 106 aa2.28□□□□□ -2.04
PMS1-216ENST00000447734 TMEM235A6NFC5 223 aa2.28□□□□□ -2.04
PMS1-216ENST00000447734 H3BT86 120 aa2.28□□□□□ -2.04
PMS1-216ENST00000447734 TRGC2P03986 189 aa2.28□□□□□ -2.04
PMS1-216ENST00000447734 BCL2P10415 239 aa2.28□□□□□ -2.04
PMS1-216ENST00000447734 POLR2HP52434 150 aaKnown RBP2.28□□□□□ -2.04
PMS1-216ENST00000447734 OR8B8Q15620 311 aa2.28□□□□□ -2.04
PMS1-216ENST00000447734 KISS1Q15726 138 aa2.28□□□□□ -2.04
PMS1-216ENST00000447734 RTL8BQ17RB0 113 aa2.28□□□□□ -2.04
PMS1-216ENST00000447734 SMIM21Q3B7S5 101 aa2.28□□□□□ -2.04
PMS1-216ENST00000447734 KRTAP25-1Q3LHN0 102 aa2.28□□□□□ -2.04
PMS1-216ENST00000447734 AGTRAPQ6RW13 159 aa2.28□□□□□ -2.04
PMS1-216ENST00000447734 MIR17HGQ75NE6 70 aa2.28□□□□□ -2.04
PMS1-216ENST00000447734 C10orf126Q8N4M7 172 aa2.28□□□□□ -2.04
PMS1-216ENST00000447734 STAG3L4Q8TBR4 150 aa2.28□□□□□ -2.04
PMS1-216ENST00000447734 BORCS8Q96FH0 119 aa2.28□□□□□ -2.04
PMS1-216ENST00000447734 SCGB3A1Q96QR1 104 aa2.28□□□□□ -2.04
PMS1-216ENST00000447734 IMMP2LQ96T52 175 aa2.28□□□□□ -2.04
PMS1-216ENST00000447734 GINS4Q9BRT9 223 aa2.28□□□□□ -2.04
PMS1-216ENST00000447734 TMEM126AQ9H061 195 aa2.28□□□□□ -2.04
PMS1-216ENST00000447734 OSTCQ9NRP0 149 aa2.28□□□□□ -2.04
PMS1-216ENST00000447734 TRAPPC2LQ9UL33 140 aa2.28□□□□□ -2.04
PMS1-216ENST00000447734 ZNF106Q9H2Y7 1883 aaKnown RBP2.28□□□□□ -2.04
PMS1-216ENST00000447734 MAST2Q6P0Q8 1798 aa2.28□□□□□ -2.04
PMS1-216ENST00000447734 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.28□□□□□ -2.05
PMS1-216ENST00000447734 ZCCHC11Q5TAX3 1644 aaKnown RBP2.28□□□□□ -2.05
PMS1-216ENST00000447734 PLXND1Q9Y4D7 1925 aa2.27□□□□□ -2.05
PMS1-216ENST00000447734 TRAV36DV7A0A075B6V5 113 aa2.27□□□□□ -2.05
PMS1-216ENST00000447734 TLCD2A6NGC4 264 aa2.27□□□□□ -2.05
PMS1-216ENST00000447734 M0R378 163 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms