RNA–Protein interactions for RNA: ENST00000447669.6

RFFL-206, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 2,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-206ENST00000447669 CYSRT1A8MQ03 144 aa19.6■□□□□ 0.73
RFFL-206ENST00000447669 FGF16O43320 207 aa19.6■□□□□ 0.73
RFFL-206ENST00000447669 CTRB1P17538 263 aa19.6■□□□□ 0.73
RFFL-206ENST00000447669 CTRB2Q6GPI1 263 aa19.6■□□□□ 0.73
RFFL-206ENST00000447669 WDR61Q9GZS3 305 aaKnown RBP19.6■□□□□ 0.73
RFFL-206ENST00000447669 MRPL36Q9P0J6 103 aaKnown RBP19.6■□□□□ 0.73
RFFL-206ENST00000447669 PITPNC1Q9UKF7 332 aa19.6■□□□□ 0.73
RFFL-206ENST00000447669 F11RQ9Y624 299 aaKnown RBP19.6■□□□□ 0.73
RFFL-206ENST00000447669 OPRK1P41145 380 aa19.59■□□□□ 0.73
RFFL-206ENST00000447669 VWC2Q2TAL6 325 aa19.59■□□□□ 0.73
RFFL-206ENST00000447669 TREML4Q6UXN2 200 aa19.59■□□□□ 0.73
RFFL-206ENST00000447669 SPP1P10451 314 aa19.58■□□□□ 0.73
RFFL-206ENST00000447669 DEFA4P12838 97 aa19.58■□□□□ 0.73
RFFL-206ENST00000447669 FGF7P21781 194 aa19.58■□□□□ 0.73
RFFL-206ENST00000447669 SUB1P53999 127 aaKnown RBP eCLIP19.58■□□□□ 0.73
RFFL-206ENST00000447669 ATP6V1FQ16864 119 aa19.58■□□□□ 0.73
RFFL-206ENST00000447669 SCGB1C1Q8TD33 95 aa19.58■□□□□ 0.73
RFFL-206ENST00000447669 TAF15Q92804 592 aaKnown RBP eCLIP19.58■□□□□ 0.732e-6■■□□□ 11.9
RFFL-206ENST00000447669 TMUB1Q9BVT8 246 aa19.58■□□□□ 0.73
RFFL-206ENST00000447669 HIVEP2P31629 2446 aa19.58■□□□□ 0.72
RFFL-206ENST00000447669 EIF5AP63241 154 aaKnown RBP19.58■□□□□ 0.72
RFFL-206ENST00000447669 GAMTQ14353 236 aa19.58■□□□□ 0.72
RFFL-206ENST00000447669 ZNF114Q8NC26 417 aa19.58■□□□□ 0.72
RFFL-206ENST00000447669 OR1P1Q8NH06 330 aa19.58■□□□□ 0.72
RFFL-206ENST00000447669 PHYHIPLQ96FC7 376 aa19.58■□□□□ 0.72
RFFL-206ENST00000447669 DLK1P80370 383 aa19.57■□□□□ 0.72
RFFL-206ENST00000447669 CD69Q07108 199 aa19.57■□□□□ 0.72
RFFL-206ENST00000447669 UNQ5815/PRO19632Q6UWF5 114 aa19.57■□□□□ 0.72
RFFL-206ENST00000447669 TMEM182Q6ZP80 229 aaPredicted RBP19.57■□□□□ 0.72
RFFL-206ENST00000447669 OR2G3Q8NGZ4 309 aa19.57■□□□□ 0.72
RFFL-206ENST00000447669 SGMS2Q8NHU3 365 aa19.57■□□□□ 0.72
RFFL-206ENST00000447669 S4R3C0 116 aa19.57■□□□□ 0.72
RFFL-206ENST00000447669 BTNL8Q6UX41 500 aa19.56■□□□□ 0.72
RFFL-206ENST00000447669 MRPL41Q8IXM3 137 aaKnown RBP19.56■□□□□ 0.72
RFFL-206ENST00000447669 NOL4LQ96MY1 436 aaPredicted RBP19.56■□□□□ 0.72
RFFL-206ENST00000447669 PRDM13Q9H4Q3 707 aa19.56■□□□□ 0.72
RFFL-206ENST00000447669 RPS10-NUDT3A0A1W2PQS6 291 aa19.56■□□□□ 0.72
RFFL-206ENST00000447669 MDKP21741 143 aaPredicted RBP19.56■□□□□ 0.72
RFFL-206ENST00000447669 FHITP49789 147 aa19.56■□□□□ 0.72
RFFL-206ENST00000447669 AKR1C1Q04828 323 aa19.56■□□□□ 0.72
RFFL-206ENST00000447669 HSD17B13Q7Z5P4 300 aaPredicted RBP19.56■□□□□ 0.72
RFFL-206ENST00000447669 GSX1Q9H4S2 264 aaPredicted RBP19.56■□□□□ 0.72
RFFL-206ENST00000447669 VPREB3Q9UKI3 123 aa19.56■□□□□ 0.72
RFFL-206ENST00000447669 NF1P21359 2839 aa19.55■□□□□ 0.72
RFFL-206ENST00000447669 IGKV1OR2-108A0A075B7D4 117 aa19.55■□□□□ 0.72
RFFL-206ENST00000447669 TEX46H3BTG2 121 aa19.55■□□□□ 0.72
RFFL-206ENST00000447669 FAM157CP0CG43 387 aa19.55■□□□□ 0.72
RFFL-206ENST00000447669 TMEM95Q3KNT9 176 aa19.55■□□□□ 0.72
RFFL-206ENST00000447669 SLC16A13Q7RTY0 426 aa19.55■□□□□ 0.72
RFFL-206ENST00000447669 TTC9CQ8N5M4 171 aa19.55■□□□□ 0.72
RFFL-206ENST00000447669 ACY3Q96HD9 319 aa19.55■□□□□ 0.72
RFFL-206ENST00000447669 SRSF8Q9BRL6 282 aaKnown RBP19.55■□□□□ 0.72
RFFL-206ENST00000447669 BTBD17A6NE02 478 aa19.54■□□□□ 0.72
RFFL-206ENST00000447669 CRYGCP07315 174 aa19.54■□□□□ 0.72
RFFL-206ENST00000447669 ATP5IP56385 69 aaPredicted RBP19.54■□□□□ 0.72
RFFL-206ENST00000447669 PVRIGQ6DKI7 326 aa19.54■□□□□ 0.72
RFFL-206ENST00000447669 OR5R1Q8NH85 324 aa19.54■□□□□ 0.72
RFFL-206ENST00000447669 FANCD2OSQ96PS1 177 aa19.54■□□□□ 0.72
RFFL-206ENST00000447669 VSIRQ9H7M9 311 aa19.54■□□□□ 0.72
RFFL-206ENST00000447669 WDR83OSQ9Y284 106 aa19.54■□□□□ 0.72
RFFL-206ENST00000447669 MT-CO2P00403 227 aa19.54■□□□□ 0.72
RFFL-206ENST00000447669 RNASEH2CQ8TDP1 164 aaKnown RBP19.54■□□□□ 0.72
RFFL-206ENST00000447669 MGST2Q99735 147 aa19.54■□□□□ 0.72
RFFL-206ENST00000447669 GGACTQ9BVM4 153 aa19.54■□□□□ 0.72
RFFL-206ENST00000447669 NPCDR1Q9BY65 106 aa19.54■□□□□ 0.72
RFFL-206ENST00000447669 NPVFQ9HCQ7 196 aa19.54■□□□□ 0.72
RFFL-206ENST00000447669 NMBP08949 121 aa19.53■□□□□ 0.72
RFFL-206ENST00000447669 SEC11BP0C7V7 166 aa19.53■□□□□ 0.72
RFFL-206ENST00000447669 NPIPB5A8MRT5 1133 aa19.52■□□□□ 0.72
RFFL-206ENST00000447669 CD99P14209 185 aa19.52■□□□□ 0.72
RFFL-206ENST00000447669 SLC7A5P1Q8MH63 180 aa19.52■□□□□ 0.72
RFFL-206ENST00000447669 NPIPB3Q92617 1050 aa19.52■□□□□ 0.72
RFFL-206ENST00000447669 CXorf58Q96LI9 332 aa19.52■□□□□ 0.72
RFFL-206ENST00000447669 SOX15O60248 233 aa19.52■□□□□ 0.72
RFFL-206ENST00000447669 ELLP55199 621 aaPredicted RBP19.52■□□□□ 0.72
RFFL-206ENST00000447669 SLC35E3Q7Z769 313 aa19.52■□□□□ 0.72
RFFL-206ENST00000447669 M0QZK8 103 aa19.51■□□□□ 0.71
RFFL-206ENST00000447669 EIF3GO75821 320 aaKnown RBP eCLIP19.51■□□□□ 0.71
RFFL-206ENST00000447669 IGHG2P01859 326 aa19.51■□□□□ 0.71
RFFL-206ENST00000447669 C16orf82Q7Z2V1 217 aa19.51■□□□□ 0.71
RFFL-206ENST00000447669 LSM4Q9Y4Z0 139 aaKnown RBP19.51■□□□□ 0.71
RFFL-206ENST00000447669 I3L2K1 104 aa19.51■□□□□ 0.71
RFFL-206ENST00000447669 GNPNAT1Q96EK6 184 aaPredicted RBP19.51■□□□□ 0.71
RFFL-206ENST00000447669 PARD6GQ9BYG4 376 aaPredicted RBP19.51■□□□□ 0.71
RFFL-206ENST00000447669 OR2J3O76001 311 aa19.5■□□□□ 0.71
RFFL-206ENST00000447669 HNF1AP20823 631 aa19.5■□□□□ 0.71
RFFL-206ENST00000447669 GATA2P23769 480 aaPredicted RBP19.5■□□□□ 0.71
RFFL-206ENST00000447669 GPX4P36969 197 aaPredicted RBP19.5■□□□□ 0.71
RFFL-206ENST00000447669 RND2P52198 227 aa19.5■□□□□ 0.71
RFFL-206ENST00000447669 EIF5AL1Q6IS14 154 aaKnown RBP19.5■□□□□ 0.71
RFFL-206ENST00000447669 TEX29Q8N6K0 151 aa19.5■□□□□ 0.71
RFFL-206ENST00000447669 MS4A10Q96PG2 267 aa19.5■□□□□ 0.71
RFFL-206ENST00000447669 ESM1Q9NQ30 184 aa19.5■□□□□ 0.71
RFFL-206ENST00000447669 ZNF355PQ9NSJ1 428 aa19.5■□□□□ 0.71
RFFL-206ENST00000447669 IGLV11-55A0A075B6I3 123 aa19.49■□□□□ 0.71
RFFL-206ENST00000447669 ZNF705EA8MWA4 302 aaPredicted RBP19.49■□□□□ 0.71
RFFL-206ENST00000447669 K7EIM0 57 aa19.49■□□□□ 0.71
RFFL-206ENST00000447669 SCAF4O95104 1147 aaKnown RBP19.49■□□□□ 0.71
RFFL-206ENST00000447669 IGHV3-23P01764 117 aa19.49■□□□□ 0.71
RFFL-206ENST00000447669 SULT1A2P50226 295 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms