RNA–Protein interactions for RNA: ENST00000447394.1

HLA-DOB-207, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-207ENST00000447394 SNCAP37840 140 aa10.22□□□□□ -0.77
HLA-DOB-207ENST00000447394 POLR2GP62487 172 aaKnown RBP eCLIP10.22□□□□□ -0.77
HLA-DOB-207ENST00000447394 RUNX1Q01196 453 aa10.22□□□□□ -0.77
HLA-DOB-207ENST00000447394 FHL3Q13643 280 aa10.22□□□□□ -0.77
HLA-DOB-207ENST00000447394 BSXQ3C1V8 233 aa10.22□□□□□ -0.77
HLA-DOB-207ENST00000447394 CLEC19AQ6UXS0 136 aa10.22□□□□□ -0.77
HLA-DOB-207ENST00000447394 LINC00482Q8N8I6 264 aa10.22□□□□□ -0.77
HLA-DOB-207ENST00000447394 OR1N2Q8NGR9 330 aa10.22□□□□□ -0.77
HLA-DOB-207ENST00000447394 PINX1Q96BK5 328 aaKnown RBP10.22□□□□□ -0.77
HLA-DOB-207ENST00000447394 USMG5Q96IX5 58 aa10.22□□□□□ -0.77
HLA-DOB-207ENST00000447394 PIGBOS1A0A0B4J2F0 54 aa10.21□□□□□ -0.77
HLA-DOB-207ENST00000447394 C7orf66A4D0T2 115 aa10.21□□□□□ -0.77
HLA-DOB-207ENST00000447394 SNRPGP15A8MWD9 76 aa10.21□□□□□ -0.77
HLA-DOB-207ENST00000447394 H3BP45 60 aa10.21□□□□□ -0.77
HLA-DOB-207ENST00000447394 WRBO00258 174 aa10.21□□□□□ -0.77
HLA-DOB-207ENST00000447394 SSNA1O43805 119 aa10.21□□□□□ -0.77
HLA-DOB-207ENST00000447394 SSSCA1O60232 199 aa10.21□□□□□ -0.77
HLA-DOB-207ENST00000447394 MT-CO2P00403 227 aa10.21□□□□□ -0.77
HLA-DOB-207ENST00000447394 ZNF616Q08AN1 781 aa10.21□□□□□ -0.77
HLA-DOB-207ENST00000447394 OXA1LQ15070 435 aa10.21□□□□□ -0.77
HLA-DOB-207ENST00000447394 MLANAQ16655 118 aa10.21□□□□□ -0.77
HLA-DOB-207ENST00000447394 TREML4Q6UXN2 200 aa10.21□□□□□ -0.77
HLA-DOB-207ENST00000447394 SLC24A4Q8NFF2 622 aa10.21□□□□□ -0.77
HLA-DOB-207ENST00000447394 OR4C12Q96R67 309 aa10.21□□□□□ -0.77
HLA-DOB-207ENST00000447394 F8W735 103 aaPredicted RBP10.2□□□□□ -0.78
HLA-DOB-207ENST00000447394 LINC01619G3V211 115 aa10.2□□□□□ -0.78
HLA-DOB-207ENST00000447394 I3L2K1 104 aa10.2□□□□□ -0.78
HLA-DOB-207ENST00000447394 BMPR1BO00238 502 aa10.2□□□□□ -0.78
HLA-DOB-207ENST00000447394 SYNGR2O43760 224 aa10.2□□□□□ -0.78
HLA-DOB-207ENST00000447394 TMEM50AO95807 157 aa10.2□□□□□ -0.78
HLA-DOB-207ENST00000447394 MBPP02686 304 aaPredicted RBP10.2□□□□□ -0.78
HLA-DOB-207ENST00000447394 NPY1RP25929 384 aa10.2□□□□□ -0.78
HLA-DOB-207ENST00000447394 GPR183P32249 361 aa10.2□□□□□ -0.78
HLA-DOB-207ENST00000447394 MYCNOSP40205 109 aa10.2□□□□□ -0.78
HLA-DOB-207ENST00000447394 NKX2-1P43699 371 aaPredicted RBP10.2□□□□□ -0.78
HLA-DOB-207ENST00000447394 ID3Q02535 119 aa10.2□□□□□ -0.78
HLA-DOB-207ENST00000447394 UBAC2Q8NBM4 344 aa10.2□□□□□ -0.78
HLA-DOB-207ENST00000447394 ZNF502Q8TBZ5 544 aa10.2□□□□□ -0.78
HLA-DOB-207ENST00000447394 SCARB1Q8WTV0 552 aa10.2□□□□□ -0.78
HLA-DOB-207ENST00000447394 EEF1AKMT3Q96AZ1 226 aa10.2□□□□□ -0.78
HLA-DOB-207ENST00000447394 HIPK2Q9H2X6 1198 aa10.2□□□□□ -0.78
HLA-DOB-207ENST00000447394 FNDC4Q9H6D8 234 aaPredicted RBP10.2□□□□□ -0.78
HLA-DOB-207ENST00000447394 MRPL36Q9P0J6 103 aaKnown RBP10.2□□□□□ -0.78
HLA-DOB-207ENST00000447394 PEF1Q9UBV8 284 aaKnown RBP10.2□□□□□ -0.78
HLA-DOB-207ENST00000447394 RCL1Q9Y2P8 373 aaKnown RBP10.2□□□□□ -0.78
HLA-DOB-207ENST00000447394 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.19□□□□□ -0.78
HLA-DOB-207ENST00000447394 OR2T8A6NH00 312 aa10.19□□□□□ -0.78
HLA-DOB-207ENST00000447394 C15orf62A8K5M9 175 aa10.19□□□□□ -0.78
HLA-DOB-207ENST00000447394 FAM90A26D6RGX4 464 aa10.19□□□□□ -0.78
HLA-DOB-207ENST00000447394 IFNA10P01566 189 aa10.19□□□□□ -0.78
HLA-DOB-207ENST00000447394 HSPB1P04792 205 aaKnown RBP10.19□□□□□ -0.78
HLA-DOB-207ENST00000447394 HOXD3P31249 432 aaPredicted RBP10.19□□□□□ -0.78
HLA-DOB-207ENST00000447394 HTR2BP41595 481 aa10.19□□□□□ -0.78
HLA-DOB-207ENST00000447394 C2orf83Q53S99 150 aa10.19□□□□□ -0.78
HLA-DOB-207ENST00000447394 PVRIGQ6DKI7 326 aa10.19□□□□□ -0.78
HLA-DOB-207ENST00000447394 GSG1LQ6UXU4 331 aa10.19□□□□□ -0.78
HLA-DOB-207ENST00000447394 DCUN1D4Q92564 292 aa10.19□□□□□ -0.78
HLA-DOB-207ENST00000447394 DPF1Q92782 380 aa10.19□□□□□ -0.78
HLA-DOB-207ENST00000447394 DLX4Q92988 240 aaPredicted RBP10.19□□□□□ -0.78
HLA-DOB-207ENST00000447394 C2orf50Q96LR7 162 aa10.19□□□□□ -0.78
HLA-DOB-207ENST00000447394 MGAT4CQ9UBM8 478 aa10.19□□□□□ -0.78
HLA-DOB-207ENST00000447394 PAIP2BQ9ULR5 123 aaKnown RBP10.19□□□□□ -0.78
HLA-DOB-207ENST00000447394 LSM5Q9Y4Y9 91 aaKnown RBP10.19□□□□□ -0.78
HLA-DOB-207ENST00000447394 IGHV3-35A0A0C4DH35 117 aa10.18□□□□□ -0.78
HLA-DOB-207ENST00000447394 CYB5BO43169 146 aa10.18□□□□□ -0.78
HLA-DOB-207ENST00000447394 CCNKO75909 580 aa10.18□□□□□ -0.78
HLA-DOB-207ENST00000447394 ARL3P36405 182 aa10.18□□□□□ -0.78
HLA-DOB-207ENST00000447394 PAX9P55771 341 aa10.18□□□□□ -0.78
HLA-DOB-207ENST00000447394 H2BFSP57053 126 aa10.18□□□□□ -0.78
HLA-DOB-207ENST00000447394 S100A10P60903 97 aa10.18□□□□□ -0.78
HLA-DOB-207ENST00000447394 OR1L6Q8NGR2 347 aa10.18□□□□□ -0.78
HLA-DOB-207ENST00000447394 VN1R17PQ8TDU5 208 aa10.18□□□□□ -0.78
HLA-DOB-207ENST00000447394 CXorf58Q96LI9 332 aa10.18□□□□□ -0.78
HLA-DOB-207ENST00000447394 CHRDL1Q9BU40 450 aa10.18□□□□□ -0.78
HLA-DOB-207ENST00000447394 C21orf62Q9NYP8 219 aa10.18□□□□□ -0.78
HLA-DOB-207ENST00000447394 THYN1Q9P016 225 aa10.18□□□□□ -0.78
HLA-DOB-207ENST00000447394 TRBV7-1A0A0A6YYK4 115 aa10.17□□□□□ -0.78
HLA-DOB-207ENST00000447394 K7EPK0 472 aa10.17□□□□□ -0.78
HLA-DOB-207ENST00000447394 MED6O75586 246 aa10.17□□□□□ -0.78
HLA-DOB-207ENST00000447394 OR2C1O95371 312 aa10.17□□□□□ -0.78
HLA-DOB-207ENST00000447394 CLEC3BP05452 202 aa10.17□□□□□ -0.78
HLA-DOB-207ENST00000447394 OR8U8P0C7N1 319 aa10.17□□□□□ -0.78
HLA-DOB-207ENST00000447394 IGLL1P15814 213 aa10.17□□□□□ -0.78
HLA-DOB-207ENST00000447394 CXCL3P19876 107 aa10.17□□□□□ -0.78
HLA-DOB-207ENST00000447394 CD33P20138 364 aa10.17□□□□□ -0.78
HLA-DOB-207ENST00000447394 EDN2P20800 178 aa10.17□□□□□ -0.78
HLA-DOB-207ENST00000447394 OPRK1P41145 380 aa10.17□□□□□ -0.78
HLA-DOB-207ENST00000447394 SUB1P53999 127 aaKnown RBP eCLIP10.17□□□□□ -0.78
HLA-DOB-207ENST00000447394 IL15RAQ13261 267 aa10.17□□□□□ -0.78
HLA-DOB-207ENST00000447394 RAB32Q13637 225 aa10.17□□□□□ -0.78
HLA-DOB-207ENST00000447394 Q56UQ5 140 aa10.17□□□□□ -0.78
HLA-DOB-207ENST00000447394 SPANXN5Q5MJ07 72 aa10.17□□□□□ -0.78
HLA-DOB-207ENST00000447394 ZNF414Q96IQ9 312 aa10.17□□□□□ -0.78
HLA-DOB-207ENST00000447394 RANGRFQ9HD47 186 aaPredicted RBP10.17□□□□□ -0.78
HLA-DOB-207ENST00000447394 SYNJ2BPP57105 145 aa10.16□□□□□ -0.78
HLA-DOB-207ENST00000447394 FCN2Q15485 313 aa10.16□□□□□ -0.78
HLA-DOB-207ENST00000447394 RPEL1Q2QD12 228 aa10.16□□□□□ -0.78
HLA-DOB-207ENST00000447394 LRRC37A5PQ49AS3 106 aa10.16□□□□□ -0.78
HLA-DOB-207ENST00000447394 ACSM6Q6P461 480 aa10.16□□□□□ -0.78
HLA-DOB-207ENST00000447394 C1QL4Q86Z23 238 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms