RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 RNF126Q9BV68 326 aa13.99□□□□□ -0.17
TRAPPC4-203ENST00000447216 ZFP57Q9NU63 452 aa13.99□□□□□ -0.17
TRAPPC4-203ENST00000447216 MBD2Q9UBB5 411 aa13.99□□□□□ -0.17
TRAPPC4-203ENST00000447216 STRAPQ9Y3F4 350 aaKnown RBP13.99□□□□□ -0.17
TRAPPC4-203ENST00000447216 TCRBV4S1A1TA0A5B7 111 aa13.98□□□□□ -0.17
TRAPPC4-203ENST00000447216 FAM24AA6NFZ4 105 aa13.98□□□□□ -0.17
TRAPPC4-203ENST00000447216 CCNKO75909 580 aa13.98□□□□□ -0.17
TRAPPC4-203ENST00000447216 IGHV3-11P01762 117 aa13.98□□□□□ -0.17
TRAPPC4-203ENST00000447216 IGHV3-48P01763 117 aa13.98□□□□□ -0.17
TRAPPC4-203ENST00000447216 HIST1H1BP16401 226 aaKnown RBP13.98□□□□□ -0.17
TRAPPC4-203ENST00000447216 PVALBP20472 110 aaPredicted RBP13.98□□□□□ -0.17
TRAPPC4-203ENST00000447216 TAS2R30P59541 319 aa13.98□□□□□ -0.17
TRAPPC4-203ENST00000447216 RPL23AP62750 156 aaKnown RBP13.98□□□□□ -0.17
TRAPPC4-203ENST00000447216 KLK9Q2XQG4 91 aa13.98□□□□□ -0.17
TRAPPC4-203ENST00000447216 PVRIGQ6DKI7 326 aa13.98□□□□□ -0.17
TRAPPC4-203ENST00000447216 C18orf65Q6ZTR6 163 aa13.98□□□□□ -0.17
TRAPPC4-203ENST00000447216 OR2T35Q8NGX2 323 aa13.98□□□□□ -0.17
TRAPPC4-203ENST00000447216 PINX1Q96BK5 328 aaKnown RBP13.98□□□□□ -0.17
TRAPPC4-203ENST00000447216 CITED2Q99967 270 aaPredicted RBP13.98□□□□□ -0.17
TRAPPC4-203ENST00000447216 SLA2Q9H6Q3 261 aa13.98□□□□□ -0.17
TRAPPC4-203ENST00000447216 KLK9Q9UKQ9 250 aa13.98□□□□□ -0.17
TRAPPC4-203ENST00000447216 STAB1Q9NY15 2570 aa13.97□□□□□ -0.17
TRAPPC4-203ENST00000447216 A0A1W2PRX2 142 aa13.97□□□□□ -0.17
TRAPPC4-203ENST00000447216 CYB5BO43169 146 aa13.97□□□□□ -0.17
TRAPPC4-203ENST00000447216 BRI3O95415 125 aa13.97□□□□□ -0.17
TRAPPC4-203ENST00000447216 IGHV3-23P01764 117 aa13.97□□□□□ -0.17
TRAPPC4-203ENST00000447216 IFNA4P05014 189 aa13.97□□□□□ -0.17
TRAPPC4-203ENST00000447216 OR8U8P0C7N1 319 aa13.97□□□□□ -0.17
TRAPPC4-203ENST00000447216 CAV2P51636 162 aa13.97□□□□□ -0.17
TRAPPC4-203ENST00000447216 MLANAQ16655 118 aa13.97□□□□□ -0.17
TRAPPC4-203ENST00000447216 PRSS54Q6PEW0 395 aa13.97□□□□□ -0.17
TRAPPC4-203ENST00000447216 C12orf54Q6X4T0 127 aa13.97□□□□□ -0.17
TRAPPC4-203ENST00000447216 ZNF491Q8N8L2 437 aa13.97□□□□□ -0.17
TRAPPC4-203ENST00000447216 NECAP1Q8NC96 275 aa13.97□□□□□ -0.17
TRAPPC4-203ENST00000447216 OR1L6Q8NGR2 347 aa13.97□□□□□ -0.17
TRAPPC4-203ENST00000447216 MYOZ3Q8TDC0 251 aa13.97□□□□□ -0.17
TRAPPC4-203ENST00000447216 ASB13Q8WXK3 278 aa13.97□□□□□ -0.17
TRAPPC4-203ENST00000447216 OR5B12Q96R08 314 aa13.97□□□□□ -0.17
TRAPPC4-203ENST00000447216 GNB4Q9HAV0 340 aa13.97□□□□□ -0.17
TRAPPC4-203ENST00000447216 IGSF23A1L1A6 192 aa13.96□□□□□ -0.17
TRAPPC4-203ENST00000447216 MFSD2BA6NFX1 497 aa13.96□□□□□ -0.17
TRAPPC4-203ENST00000447216 FAM223BA6NKX1 122 aa13.96□□□□□ -0.17
TRAPPC4-203ENST00000447216 E5RGE8 158 aa13.96□□□□□ -0.17
TRAPPC4-203ENST00000447216 G3V3Q6 166 aa13.96□□□□□ -0.17
TRAPPC4-203ENST00000447216 K7EIM0 57 aa13.96□□□□□ -0.17
TRAPPC4-203ENST00000447216 TSC22D2O75157 780 aa13.96□□□□□ -0.17
TRAPPC4-203ENST00000447216 LY86O95711 162 aa13.96□□□□□ -0.17
TRAPPC4-203ENST00000447216 METTL15P1P0C7V9 234 aa13.96□□□□□ -0.17
TRAPPC4-203ENST00000447216 RAB11AP62491 216 aa13.96□□□□□ -0.17
TRAPPC4-203ENST00000447216 RPP30P78346 268 aaKnown RBP13.96□□□□□ -0.17
TRAPPC4-203ENST00000447216 ATP5G2Q06055 141 aa13.96□□□□□ -0.17
TRAPPC4-203ENST00000447216 C15orf32Q32M92 178 aa13.96□□□□□ -0.17
TRAPPC4-203ENST00000447216 TMEM14EPQ6UXP3 125 aa13.96□□□□□ -0.17
TRAPPC4-203ENST00000447216 ETV3LQ6ZN32 361 aa13.96□□□□□ -0.17
TRAPPC4-203ENST00000447216 FAM223AQ8IWN6 122 aa13.96□□□□□ -0.17
TRAPPC4-203ENST00000447216 ST6GAL2Q96JF0 529 aa13.96□□□□□ -0.17
TRAPPC4-203ENST00000447216 FNDC4Q9H6D8 234 aaPredicted RBP13.96□□□□□ -0.17
TRAPPC4-203ENST00000447216 WNK1Q9H4A3 2382 aa13.96□□□□□ -0.18
TRAPPC4-203ENST00000447216 I3L2K1 104 aa13.95□□□□□ -0.18
TRAPPC4-203ENST00000447216 MT-CO2P00403 227 aa13.95□□□□□ -0.18
TRAPPC4-203ENST00000447216 PET100P0DJ07 73 aa13.95□□□□□ -0.18
TRAPPC4-203ENST00000447216 EXOSC2Q13868 293 aaKnown RBP13.95□□□□□ -0.18
TRAPPC4-203ENST00000447216 OR8G2PQ6IF36 304 aa13.95□□□□□ -0.18
TRAPPC4-203ENST00000447216 NOXA1Q86UR1 476 aa13.95□□□□□ -0.18
TRAPPC4-203ENST00000447216 THAP6Q8TBB0 222 aa13.95□□□□□ -0.18
TRAPPC4-203ENST00000447216 DCUN1D4Q92564 292 aa13.95□□□□□ -0.18
TRAPPC4-203ENST00000447216 BOLA1Q9Y3E2 137 aa13.95□□□□□ -0.18
TRAPPC4-203ENST00000447216 LYL1P12980 280 aa13.94□□□□□ -0.18
TRAPPC4-203ENST00000447216 OPRK1P41145 380 aa13.94□□□□□ -0.18
TRAPPC4-203ENST00000447216 ATP5IP56385 69 aaPredicted RBP13.94□□□□□ -0.18
TRAPPC4-203ENST00000447216 CD300CQ08708 224 aa13.94□□□□□ -0.18
TRAPPC4-203ENST00000447216 ARL16Q0P5N6 197 aa13.94□□□□□ -0.18
TRAPPC4-203ENST00000447216 NSUN5P1Q3KNT7 163 aa13.94□□□□□ -0.18
TRAPPC4-203ENST00000447216 AKAP14Q86UN6 197 aa13.94□□□□□ -0.18
TRAPPC4-203ENST00000447216 HAPLN4Q86UW8 402 aa13.94□□□□□ -0.18
TRAPPC4-203ENST00000447216 C3orf56Q8N813 242 aa13.94□□□□□ -0.18
TRAPPC4-203ENST00000447216 RNASEH2CQ8TDP1 164 aaKnown RBP13.94□□□□□ -0.18
TRAPPC4-203ENST00000447216 SCARB1Q8WTV0 552 aa13.94□□□□□ -0.18
TRAPPC4-203ENST00000447216 USMG5Q96IX5 58 aa13.94□□□□□ -0.18
TRAPPC4-203ENST00000447216 CITED1Q99966 193 aa13.94□□□□□ -0.18
TRAPPC4-203ENST00000447216 LYRM2Q9NU23 88 aaPredicted RBP13.94□□□□□ -0.18
TRAPPC4-203ENST00000447216 THYN1Q9P016 225 aa13.94□□□□□ -0.18
TRAPPC4-203ENST00000447216 MRPL36Q9P0J6 103 aaKnown RBP13.94□□□□□ -0.18
TRAPPC4-203ENST00000447216 TSSC4Q9Y5U2 329 aaPredicted RBP13.94□□□□□ -0.18
TRAPPC4-203ENST00000447216 FXYD6-FXYD2A0A087WZ82 144 aa13.93□□□□□ -0.18
TRAPPC4-203ENST00000447216 A0A0G2JLM5 398 aa13.93□□□□□ -0.18
TRAPPC4-203ENST00000447216 ANKRD34BA5PLL1 514 aa13.93□□□□□ -0.18
TRAPPC4-203ENST00000447216 PMS2P5A8MQ11 134 aa13.93□□□□□ -0.18
TRAPPC4-203ENST00000447216 ADARB2-AS1A8MUL3 147 aa13.93□□□□□ -0.18
TRAPPC4-203ENST00000447216 NUDT19A8MXV4 375 aa13.93□□□□□ -0.18
TRAPPC4-203ENST00000447216 CORTO00230 105 aa13.93□□□□□ -0.18
TRAPPC4-203ENST00000447216 CST7O76096 145 aa13.93□□□□□ -0.18
TRAPPC4-203ENST00000447216 P2RY1P47900 373 aa13.93□□□□□ -0.18
TRAPPC4-203ENST00000447216 FGL1Q08830 312 aa13.93□□□□□ -0.18
TRAPPC4-203ENST00000447216 TMEM252Q8N6L7 170 aa13.93□□□□□ -0.18
TRAPPC4-203ENST00000447216 KLHL30-AS1Q8NEE0 82 aa13.93□□□□□ -0.18
TRAPPC4-203ENST00000447216 UBE2E2Q96LR5 201 aa13.93□□□□□ -0.18
TRAPPC4-203ENST00000447216 ZNF747Q9BV97 191 aa13.93□□□□□ -0.18
TRAPPC4-203ENST00000447216 PRSS46E5RG02 174 aa13.92□□□□□ -0.18
TRAPPC4-203ENST00000447216 CDX1P47902 265 aaPredicted RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms